RNA–Protein interactions for RNA: ENST00000514030.1

SNX2-212, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-212ENST00000514030 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
SNX2-212ENST00000514030 ASTLQ6HA08 431 aaPredicted RBP14.18□□□□□ -0.14
SNX2-212ENST00000514030 RASEFQ8IZ41 740 aa14.18□□□□□ -0.14
SNX2-212ENST00000514030 KIF12Q96FN5 646 aa14.17□□□□□ -0.14
SNX2-212ENST00000514030 FBXO3Q9UK99 471 aa14.15□□□□□ -0.14
SNX2-212ENST00000514030 ATMINO43313 823 aaPredicted RBP14.14□□□□□ -0.15
SNX2-212ENST00000514030 SLC39A7Q92504 469 aa14.14□□□□□ -0.15
SNX2-212ENST00000514030 PELP1Q8IZL8 1130 aaKnown RBP14.11□□□□□ -0.15
SNX2-212ENST00000514030 METRNQ9UJH8 293 aa14.11□□□□□ -0.15
SNX2-212ENST00000514030 C7P10643 843 aa14.1□□□□□ -0.15
SNX2-212ENST00000514030 MAP3K13O43283 966 aa14.09□□□□□ -0.15
SNX2-212ENST00000514030 FAM212AQ96EL1 285 aa14.09□□□□□ -0.15
SNX2-212ENST00000514030 NUBP1P53384 320 aa14.05□□□□□ -0.16
SNX2-212ENST00000514030 TIE1P35590 1138 aa14.04□□□□□ -0.16
SNX2-212ENST00000514030 ATN1P54259 1190 aaPredicted RBP14.03□□□□□ -0.16
SNX2-212ENST00000514030 SGIP1Q9BQI5 828 aa14.03□□□□□ -0.16
SNX2-212ENST00000514030 BMP2KQ9NSY1 1161 aaPredicted RBP14.02□□□□□ -0.17
SNX2-212ENST00000514030 POTEB2H3BUK9 544 aa14.01□□□□□ -0.17
SNX2-212ENST00000514030 OTUD5Q96G74 571 aa14.01□□□□□ -0.17
SNX2-212ENST00000514030 PCDHB13Q9Y5F0 798 aa14.01□□□□□ -0.17
SNX2-212ENST00000514030 TRPC6Q9Y210 931 aa13.97□□□□□ -0.17
SNX2-212ENST00000514030 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.17
SNX2-212ENST00000514030 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
SNX2-212ENST00000514030 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
SNX2-212ENST00000514030 VASPP50552 380 aaPredicted RBP13.9□□□□□ -0.18
SNX2-212ENST00000514030 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
SNX2-212ENST00000514030 SCUBE2Q9NQ36 999 aa13.9□□□□□ -0.18
SNX2-212ENST00000514030 SEC24BO95487 1268 aa13.88□□□□□ -0.19
SNX2-212ENST00000514030 IFNL1Q8IU54 200 aa13.87□□□□□ -0.19
SNX2-212ENST00000514030 TRIM35Q9UPQ4 493 aa13.86□□□□□ -0.19
SNX2-212ENST00000514030 IER5LQ5T953 404 aa13.85□□□□□ -0.19
SNX2-212ENST00000514030 PLSCR2Q9NRY7 297 aa13.85□□□□□ -0.19
SNX2-212ENST00000514030 TMEM106CQ9BVX2 250 aa13.82□□□□□ -0.2
SNX2-212ENST00000514030 PYGBP11216 843 aa13.81□□□□□ -0.2
SNX2-212ENST00000514030 POTEJP0CG39 1038 aa13.8□□□□□ -0.2
SNX2-212ENST00000514030 GSE1Q14687 1217 aa13.8□□□□□ -0.2
SNX2-212ENST00000514030 POTEFA5A3E0 1075 aa13.78□□□□□ -0.2
SNX2-212ENST00000514030 COLQQ9Y215 455 aaPredicted RBP13.74□□□□□ -0.21
SNX2-212ENST00000514030 PLCG2P16885 1265 aa13.72□□□□□ -0.21
SNX2-212ENST00000514030 POTEMA6NI47 508 aa13.69□□□□□ -0.22
SNX2-212ENST00000514030 ZNF467Q7Z7K2 595 aaPredicted RBP13.69□□□□□ -0.22
SNX2-212ENST00000514030 PCDHB8Q9UN66 801 aa13.68□□□□□ -0.22
SNX2-212ENST00000514030 POTEGQ6S5H5 508 aa13.65□□□□□ -0.22
SNX2-212ENST00000514030 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
SNX2-212ENST00000514030 IRX5P78411 483 aaPredicted RBP13.61□□□□□ -0.23
SNX2-212ENST00000514030 GOLGA2Q08379 1002 aa13.61□□□□□ -0.23
SNX2-212ENST00000514030 CHRM1P11229 460 aaPredicted RBP13.6□□□□□ -0.23
SNX2-212ENST00000514030 FAM163AQ96GL9 167 aaPredicted RBP13.6□□□□□ -0.23
SNX2-212ENST00000514030 OCEL1Q9H607 264 aa13.59□□□□□ -0.23
SNX2-212ENST00000514030 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
SNX2-212ENST00000514030 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
SNX2-212ENST00000514030 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
SNX2-212ENST00000514030 MKRN3Q13064 507 aaKnown RBP13.54□□□□□ -0.24
SNX2-212ENST00000514030 PCDH10Q9P2E7 1040 aa13.53□□□□□ -0.24
SNX2-212ENST00000514030 PSEN1P49768 467 aa13.51□□□□□ -0.25
SNX2-212ENST00000514030 PDAP1Q13442 181 aaKnown RBP13.48□□□□□ -0.25
SNX2-212ENST00000514030 LCE2DQ5TA82 110 aaPredicted RBP13.47□□□□□ -0.25
SNX2-212ENST00000514030 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
SNX2-212ENST00000514030 TRIM41Q8WV44 630 aa13.44□□□□□ -0.26
SNX2-212ENST00000514030 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
SNX2-212ENST00000514030 L3MBTL3Q96JM7 780 aaPredicted RBP13.42□□□□□ -0.26
SNX2-212ENST00000514030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■■□□ 16.7
SNX2-212ENST00000514030 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
SNX2-212ENST00000514030 SNPHO15079 494 aa13.38□□□□□ -0.27
SNX2-212ENST00000514030 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
SNX2-212ENST00000514030 G3V3G9 751 aa13.33□□□□□ -0.28
SNX2-212ENST00000514030 ST18O60284 1047 aa13.33□□□□□ -0.28
SNX2-212ENST00000514030 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
SNX2-212ENST00000514030 ILDR1Q86SU0 546 aaPredicted RBP13.25□□□□□ -0.29
SNX2-212ENST00000514030 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
SNX2-212ENST00000514030 BOLA1Q9Y3E2 137 aa13.21□□□□□ -0.29
SNX2-212ENST00000514030 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
SNX2-212ENST00000514030 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
SNX2-212ENST00000514030 EFCAB3Q8N7B9 438 aa13.17□□□□□ -0.3
SNX2-212ENST00000514030 VGFO15240 615 aaPredicted RBP13.16□□□□□ -0.3
SNX2-212ENST00000514030 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
SNX2-212ENST00000514030 MARVELD3Q96A59 401 aa13.12□□□□□ -0.31
SNX2-212ENST00000514030 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
SNX2-212ENST00000514030 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
SNX2-212ENST00000514030 EMP3P54852 163 aa13.1□□□□□ -0.31
SNX2-212ENST00000514030 RNF25Q96BH1 459 aaPredicted RBP13.1□□□□□ -0.31
SNX2-212ENST00000514030 SOX12O15370 315 aa13.09□□□□□ -0.31
SNX2-212ENST00000514030 ZNF710Q8N1W2 664 aa13.03□□□□□ -0.32
SNX2-212ENST00000514030 DOK7Q18PE1 504 aa13.02□□□□□ -0.33
SNX2-212ENST00000514030 RIMBP2O15034 1052 aa13□□□□□ -0.33
SNX2-212ENST00000514030 MICALL2Q8IY33 904 aa13□□□□□ -0.33
SNX2-212ENST00000514030 PHF8Q9UPP1 1060 aa12.98□□□□□ -0.33
SNX2-212ENST00000514030 FAM205CA6NFA0 338 aa12.97□□□□□ -0.33
SNX2-212ENST00000514030 ECM2O94769 699 aaPredicted RBP12.97□□□□□ -0.33
SNX2-212ENST00000514030 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
SNX2-212ENST00000514030 NLRP6P59044 892 aa12.96□□□□□ -0.33
SNX2-212ENST00000514030 HS3ST6Q96QI5 342 aa12.96□□□□□ -0.33
SNX2-212ENST00000514030 STK24Q9Y6E0 443 aa12.96□□□□□ -0.33
SNX2-212ENST00000514030 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
SNX2-212ENST00000514030 MS4A4AQ96JQ5 239 aa12.93□□□□□ -0.34
SNX2-212ENST00000514030 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
SNX2-212ENST00000514030 STK25O00506 426 aa12.91□□□□□ -0.34
SNX2-212ENST00000514030 SPNS2Q8IVW8 549 aa12.9□□□□□ -0.34
SNX2-212ENST00000514030 MMRN1Q13201 1228 aa12.87□□□□□ -0.35
SNX2-212ENST00000514030 ERBB3P21860 1342 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms