RNA–Protein interactions for RNA: ENST00000510204.5

SH3BP2-217, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 3,617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-217ENST00000510204 SMARCA2P51531 1590 aa16.49■□□□□ 0.23
SH3BP2-217ENST00000510204 EEA1Q15075 1411 aa16.45■□□□□ 0.22
SH3BP2-217ENST00000510204 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
SH3BP2-217ENST00000510204 EIF4G1Q04637 1599 aaKnown RBP16.4■□□□□ 0.22
SH3BP2-217ENST00000510204 GOLGA3Q08378 1498 aa16.38■□□□□ 0.21
SH3BP2-217ENST00000510204 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
SH3BP2-217ENST00000510204 RSPH6AQ9H0K4 717 aa16.33■□□□□ 0.2
SH3BP2-217ENST00000510204 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
SH3BP2-217ENST00000510204 NOP58Q9Y2X3 529 aaKnown RBP16.3■□□□□ 0.2
SH3BP2-217ENST00000510204 BICRAQ9NZM4 1560 aa16.29■□□□□ 0.2
SH3BP2-217ENST00000510204 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
SH3BP2-217ENST00000510204 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.2
SH3BP2-217ENST00000510204 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.2
SH3BP2-217ENST00000510204 C11orf95C9JLR9 678 aaPredicted RBP16.26■□□□□ 0.19
SH3BP2-217ENST00000510204 CLIP1P30622 1438 aa16.25■□□□□ 0.19
SH3BP2-217ENST00000510204 TAF7LQ5H9L4 462 aa16.25■□□□□ 0.19
SH3BP2-217ENST00000510204 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
SH3BP2-217ENST00000510204 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
SH3BP2-217ENST00000510204 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
SH3BP2-217ENST00000510204 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
SH3BP2-217ENST00000510204 SYNJ1O43426 1573 aa16.2■□□□□ 0.18
SH3BP2-217ENST00000510204 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
SH3BP2-217ENST00000510204 KCNH8Q96L42 1107 aa16.19■□□□□ 0.18
SH3BP2-217ENST00000510204 RAPGEF2Q9Y4G8 1499 aa16.16■□□□□ 0.18
SH3BP2-217ENST00000510204 ARXQ96QS3 562 aa16.16■□□□□ 0.18
SH3BP2-217ENST00000510204 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
SH3BP2-217ENST00000510204 WASHC2AQ641Q2 1341 aa16.12■□□□□ 0.17
SH3BP2-217ENST00000510204 WASHC2CQ9Y4E1 1318 aa16.11■□□□□ 0.17
SH3BP2-217ENST00000510204 KIF21BO75037 1637 aa16.1■□□□□ 0.17
SH3BP2-217ENST00000510204 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
SH3BP2-217ENST00000510204 DDX10Q13206 875 aaKnown RBP16.06■□□□□ 0.16
SH3BP2-217ENST00000510204 KANK4Q5T7N3 995 aaPredicted RBP16.05■□□□□ 0.16
SH3BP2-217ENST00000510204 CCER2I3L3R5 266 aa16.05■□□□□ 0.16
SH3BP2-217ENST00000510204 HSP90AA2PQ14568 343 aaPredicted RBP16.05■□□□□ 0.16
SH3BP2-217ENST00000510204 P3H3Q8IVL6 736 aa16.04■□□□□ 0.16
SH3BP2-217ENST00000510204 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
SH3BP2-217ENST00000510204 ANP32CO43423 234 aa16.01■□□□□ 0.15
SH3BP2-217ENST00000510204 NEFMP07197 916 aa15.99■□□□□ 0.15
SH3BP2-217ENST00000510204 RRP9O43818 475 aaKnown RBP15.98■□□□□ 0.15
SH3BP2-217ENST00000510204 NAP1L2Q9ULW6 460 aaPredicted RBP15.98■□□□□ 0.15
SH3BP2-217ENST00000510204 PEG3Q9GZU2 1588 aa15.97■□□□□ 0.15
SH3BP2-217ENST00000510204 CUX2O14529 1486 aa15.96■□□□□ 0.15
SH3BP2-217ENST00000510204 DHX37Q8IY37 1157 aaKnown RBP15.96■□□□□ 0.15
SH3BP2-217ENST00000510204 FAM43AQ8N2R8 423 aa15.96■□□□□ 0.15
SH3BP2-217ENST00000510204 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
SH3BP2-217ENST00000510204 PPP1R15AO75807 674 aaPredicted RBP15.93■□□□□ 0.14
SH3BP2-217ENST00000510204 CHMP4BQ9H444 224 aaKnown RBP15.93■□□□□ 0.14
SH3BP2-217ENST00000510204 ZBTB47Q9UFB7 747 aaPredicted RBP15.92■□□□□ 0.14
SH3BP2-217ENST00000510204 IPO9Q96P70 1041 aaKnown RBP15.92■□□□□ 0.14
SH3BP2-217ENST00000510204 BBXQ8WY36 941 aaPredicted RBP15.91■□□□□ 0.14
SH3BP2-217ENST00000510204 PRDM4Q9UKN5 801 aa15.91■□□□□ 0.14
SH3BP2-217ENST00000510204 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
SH3BP2-217ENST00000510204 CCNB3Q8WWL7 1395 aa15.9■□□□□ 0.14
SH3BP2-217ENST00000510204 FAM50AQ14320 339 aaKnown RBP15.89■□□□□ 0.13
SH3BP2-217ENST00000510204 KIF27Q86VH2 1401 aa15.89■□□□□ 0.13
SH3BP2-217ENST00000510204 USP35Q9P2H5 1018 aa15.88■□□□□ 0.13
SH3BP2-217ENST00000510204 RGS3P49796 1198 aa15.87■□□□□ 0.13
SH3BP2-217ENST00000510204 NAP1L5Q96NT1 182 aaPredicted RBP15.87■□□□□ 0.13
SH3BP2-217ENST00000510204 TOP2BQ02880 1626 aa15.87■□□□□ 0.13
SH3BP2-217ENST00000510204 CHMP4AQ9BY43 222 aa15.86■□□□□ 0.13
SH3BP2-217ENST00000510204 PPP4R2Q9NY27 417 aa15.86■□□□□ 0.13
SH3BP2-217ENST00000510204 HSP90AA1P07900 732 aaKnown RBP15.85■□□□□ 0.13
SH3BP2-217ENST00000510204 RAB3GAP2Q9H2M9 1393 aa15.85■□□□□ 0.13
SH3BP2-217ENST00000510204 IRX6P78412 446 aaPredicted RBP15.84■□□□□ 0.13
SH3BP2-217ENST00000510204 CUX1P39880 1505 aa15.84■□□□□ 0.13
SH3BP2-217ENST00000510204 GSE1Q14687 1217 aa15.83■□□□□ 0.13
SH3BP2-217ENST00000510204 GTF2E1P29083 439 aaPredicted RBP15.83■□□□□ 0.12
SH3BP2-217ENST00000510204 ARAP1Q96P48 1450 aa15.83■□□□□ 0.12
SH3BP2-217ENST00000510204 ANP32AP39687 249 aaKnown RBP15.83■□□□□ 0.12
SH3BP2-217ENST00000510204 HNRNPUQ00839 825 aaKnown RBP eCLIP15.83■□□□□ 0.12
SH3BP2-217ENST00000510204 WDR97A6NE52 1622 aa15.83■□□□□ 0.12
SH3BP2-217ENST00000510204 MAPKBP1O60336 1514 aa15.83■□□□□ 0.12
SH3BP2-217ENST00000510204 LAS1LQ9Y4W2 734 aaKnown RBP15.8■□□□□ 0.12
SH3BP2-217ENST00000510204 BRD2P25440 801 aaKnown RBP15.8■□□□□ 0.12
SH3BP2-217ENST00000510204 PRXQ9BXM0 1461 aa15.79■□□□□ 0.12
SH3BP2-217ENST00000510204 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
SH3BP2-217ENST00000510204 CALD1Q05682 793 aaKnown RBP15.77■□□□□ 0.11
SH3BP2-217ENST00000510204 ZNF326Q5BKZ1 582 aaKnown RBP15.77■□□□□ 0.11
SH3BP2-217ENST00000510204 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.11
SH3BP2-217ENST00000510204 SIN3AQ96ST3 1273 aa15.76■□□□□ 0.11
SH3BP2-217ENST00000510204 IPO4Q8TEX9 1081 aaKnown RBP15.75■□□□□ 0.11
SH3BP2-217ENST00000510204 HIRIP3Q9BW71 556 aaPredicted RBP15.75■□□□□ 0.11
SH3BP2-217ENST00000510204 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
SH3BP2-217ENST00000510204 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
SH3BP2-217ENST00000510204 FRAT1Q92837 279 aaPredicted RBP15.73■□□□□ 0.11
SH3BP2-217ENST00000510204 RRAGDQ9NQL2 400 aaPredicted RBP15.73■□□□□ 0.11
SH3BP2-217ENST00000510204 CARMIL1Q5VZK9 1371 aa15.73■□□□□ 0.11
SH3BP2-217ENST00000510204 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
SH3BP2-217ENST00000510204 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
SH3BP2-217ENST00000510204 IGF1RP08069 1367 aa15.71■□□□□ 0.11
SH3BP2-217ENST00000510204 CFTRP13569 1480 aa15.71■□□□□ 0.11
SH3BP2-217ENST00000510204 CANXP27824 592 aaKnown RBP15.7■□□□□ 0.1
SH3BP2-217ENST00000510204 ARHGAP35Q9NRY4 1499 aa15.7■□□□□ 0.1
SH3BP2-217ENST00000510204 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
SH3BP2-217ENST00000510204 FOXD1Q16676 465 aa15.7■□□□□ 0.1
SH3BP2-217ENST00000510204 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
SH3BP2-217ENST00000510204 ARID3CA6NKF2 412 aa15.68■□□□□ 0.1
SH3BP2-217ENST00000510204 B4GALNT3Q6L9W6 998 aa15.68■□□□□ 0.1
SH3BP2-217ENST00000510204 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
SH3BP2-217ENST00000510204 HMGXB3Q12766 1538 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms