RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
OTUD4-207ENST00000509517 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
OTUD4-207ENST00000509517 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
OTUD4-207ENST00000509517 C7P10643 843 aa11.99□□□□□ -0.49
OTUD4-207ENST00000509517 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
OTUD4-207ENST00000509517 SLC39A7Q92504 469 aa11.98□□□□□ -0.49
OTUD4-207ENST00000509517 TSPYL2Q9H2G4 693 aaPredicted RBP11.98□□□□□ -0.49
OTUD4-207ENST00000509517 POTEFA5A3E0 1075 aa11.96□□□□□ -0.49
OTUD4-207ENST00000509517 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
OTUD4-207ENST00000509517 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
OTUD4-207ENST00000509517 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
OTUD4-207ENST00000509517 KIF12Q96FN5 646 aa11.89□□□□□ -0.51
OTUD4-207ENST00000509517 EHMT2Q96KQ7 1210 aa11.89□□□□□ -0.51
OTUD4-207ENST00000509517 BMP2KQ9NSY1 1161 aaPredicted RBP11.87□□□□□ -0.51
OTUD4-207ENST00000509517 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
OTUD4-207ENST00000509517 PCDH10Q9P2E7 1040 aa11.86□□□□□ -0.51
OTUD4-207ENST00000509517 MAP3K13O43283 966 aa11.82□□□□□ -0.52
OTUD4-207ENST00000509517 PROM2Q8N271 834 aa11.81□□□□□ -0.52
OTUD4-207ENST00000509517 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
OTUD4-207ENST00000509517 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
OTUD4-207ENST00000509517 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
OTUD4-207ENST00000509517 TTLL13PA6NNM8 815 aa11.72□□□□□ -0.53
OTUD4-207ENST00000509517 TIE1P35590 1138 aa11.72□□□□□ -0.53
OTUD4-207ENST00000509517 CDAN1Q8IWY9 1227 aa11.67□□□□□ -0.54
OTUD4-207ENST00000509517 MIER1Q8N108 512 aa11.67□□□□□ -0.54
OTUD4-207ENST00000509517 SEC24BO95487 1268 aa11.65□□□□□ -0.54
OTUD4-207ENST00000509517 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
OTUD4-207ENST00000509517 ST18O60284 1047 aa11.58□□□□□ -0.56
OTUD4-207ENST00000509517 PCDHB13Q9Y5F0 798 aa11.58□□□□□ -0.56
OTUD4-207ENST00000509517 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
OTUD4-207ENST00000509517 SLAIN1Q8ND83 568 aa11.56□□□□□ -0.56
OTUD4-207ENST00000509517 NUBP1P53384 320 aa11.54□□□□□ -0.56
OTUD4-207ENST00000509517 IER5LQ5T953 404 aa11.53□□□□□ -0.56
OTUD4-207ENST00000509517 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
OTUD4-207ENST00000509517 SGIP1Q9BQI5 828 aa11.5□□□□□ -0.57
OTUD4-207ENST00000509517 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
OTUD4-207ENST00000509517 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
OTUD4-207ENST00000509517 IRX5P78411 483 aaPredicted RBP11.46□□□□□ -0.57
OTUD4-207ENST00000509517 PLCG2P16885 1265 aa11.42□□□□□ -0.58
OTUD4-207ENST00000509517 MMRN1Q13201 1228 aa11.41□□□□□ -0.58
OTUD4-207ENST00000509517 SPNS2Q8IVW8 549 aa11.4□□□□□ -0.58
OTUD4-207ENST00000509517 MARVELD3Q96A59 401 aa11.38□□□□□ -0.59
OTUD4-207ENST00000509517 OCEL1Q9H607 264 aa11.34□□□□□ -0.59
OTUD4-207ENST00000509517 PYGBP11216 843 aa11.33□□□□□ -0.6
OTUD4-207ENST00000509517 FAM212AQ96EL1 285 aa11.33□□□□□ -0.6
OTUD4-207ENST00000509517 PCDHB8Q9UN66 801 aa11.33□□□□□ -0.6
OTUD4-207ENST00000509517 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
OTUD4-207ENST00000509517 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
OTUD4-207ENST00000509517 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
OTUD4-207ENST00000509517 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.61
OTUD4-207ENST00000509517 TMEM121BQ9BXQ6 578 aaPredicted RBP11.27□□□□□ -0.61
OTUD4-207ENST00000509517 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.61
OTUD4-207ENST00000509517 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
OTUD4-207ENST00000509517 SNPHO15079 494 aa11.21□□□□□ -0.61
OTUD4-207ENST00000509517 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
OTUD4-207ENST00000509517 KRTAP3-2Q9BYR7 98 aa11.19□□□□□ -0.62
OTUD4-207ENST00000509517 FKBP8Q14318 412 aa11.15□□□□□ -0.62
OTUD4-207ENST00000509517 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
OTUD4-207ENST00000509517 EMP3P54852 163 aa11.14□□□□□ -0.63
OTUD4-207ENST00000509517 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
OTUD4-207ENST00000509517 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
OTUD4-207ENST00000509517 C3orf67Q6ZVT6 689 aa11.1□□□□□ -0.63
OTUD4-207ENST00000509517 MKRN3Q13064 507 aaKnown RBP11.07□□□□□ -0.64
OTUD4-207ENST00000509517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.07□□□□□ -0.64
OTUD4-207ENST00000509517 L3MBTL3Q96JM7 780 aaPredicted RBP11.06□□□□□ -0.64
OTUD4-207ENST00000509517 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
OTUD4-207ENST00000509517 PSEN1P49768 467 aa11.02□□□□□ -0.65
OTUD4-207ENST00000509517 GOLGA2Q08379 1002 aa11.02□□□□□ -0.65
OTUD4-207ENST00000509517 ZNF467Q7Z7K2 595 aaPredicted RBP11.01□□□□□ -0.65
OTUD4-207ENST00000509517 ILDR1Q86SU0 546 aaPredicted RBP11.01□□□□□ -0.65
OTUD4-207ENST00000509517 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
OTUD4-207ENST00000509517 GSE1Q14687 1217 aa10.96□□□□□ -0.65
OTUD4-207ENST00000509517 KLHL34Q8N239 644 aa10.96□□□□□ -0.65
OTUD4-207ENST00000509517 CABP2Q9NPB3 220 aa10.91□□□□□ -0.66
OTUD4-207ENST00000509517 BOLA1Q9Y3E2 137 aa10.91□□□□□ -0.66
OTUD4-207ENST00000509517 HOXB1P14653 301 aaPredicted RBP10.9□□□□□ -0.66
OTUD4-207ENST00000509517 VASPP50552 380 aaPredicted RBP10.9□□□□□ -0.66
OTUD4-207ENST00000509517 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
OTUD4-207ENST00000509517 PDAP1Q13442 181 aaKnown RBP10.87□□□□□ -0.67
OTUD4-207ENST00000509517 ERBB3P21860 1342 aa10.86□□□□□ -0.67
OTUD4-207ENST00000509517 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
OTUD4-207ENST00000509517 VARS2Q5ST30 1063 aaKnown RBP10.81□□□□□ -0.68
OTUD4-207ENST00000509517 TMEM92Q6UXU6 159 aa10.81□□□□□ -0.68
OTUD4-207ENST00000509517 RNF166Q96A37 237 aaPredicted RBP10.81□□□□□ -0.68
OTUD4-207ENST00000509517 G3V3G9 751 aa10.78□□□□□ -0.68
OTUD4-207ENST00000509517 DOK7Q18PE1 504 aa10.77□□□□□ -0.69
OTUD4-207ENST00000509517 EFCAB3Q8N7B9 438 aa10.76□□□□□ -0.69
OTUD4-207ENST00000509517 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
OTUD4-207ENST00000509517 IFNLR1Q8IU57 520 aaPredicted RBP10.75□□□□□ -0.69
OTUD4-207ENST00000509517 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
OTUD4-207ENST00000509517 GPR153Q6NV75 609 aa10.72□□□□□ -0.69
OTUD4-207ENST00000509517 ZNF687Q8N1G0 1237 aa10.71□□□□□ -0.69
OTUD4-207ENST00000509517 MICALL2Q8IY33 904 aa10.69□□□□□ -0.7
OTUD4-207ENST00000509517 SPOCK2Q92563 424 aa10.69□□□□□ -0.7
OTUD4-207ENST00000509517 KHSRPQ92945 711 aaKnown RBP eCLIP10.66□□□□□ -0.7
OTUD4-207ENST00000509517 RIMBP2O15034 1052 aa10.65□□□□□ -0.7
OTUD4-207ENST00000509517 MS4A4AQ96JQ5 239 aa10.65□□□□□ -0.7
OTUD4-207ENST00000509517 ARSIQ5FYB1 569 aa10.64□□□□□ -0.71
OTUD4-207ENST00000509517 ANKRD13DQ6ZTN6 518 aa10.63□□□□□ -0.71
OTUD4-207ENST00000509517 ZSWIM6Q9HCJ5 1215 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms