RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 ATMINO43313 823 aaPredicted RBP14.31□□□□□ -0.12
SNX2-208ENST00000509281 CDAN1Q8IWY9 1227 aa14.31□□□□□ -0.12
SNX2-208ENST00000509281 SCUBE2Q9NQ36 999 aa14.26□□□□□ -0.13
SNX2-208ENST00000509281 PAK3O75914 559 aaPredicted RBP14.23□□□□□ -0.13
SNX2-208ENST00000509281 MS4A3Q96HJ5 214 aa14.23□□□□□ -0.13
SNX2-208ENST00000509281 POTEFA5A3E0 1075 aa14.16□□□□□ -0.14
SNX2-208ENST00000509281 MMRN1Q13201 1228 aa14.11□□□□□ -0.15
SNX2-208ENST00000509281 ATN1P54259 1190 aaPredicted RBP14.09□□□□□ -0.15
SNX2-208ENST00000509281 MNX1P50219 401 aaPredicted RBP14.05□□□□□ -0.16
SNX2-208ENST00000509281 SPNS2Q8IVW8 549 aa14.02□□□□□ -0.17
SNX2-208ENST00000509281 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
SNX2-208ENST00000509281 ST18O60284 1047 aa13.95□□□□□ -0.18
SNX2-208ENST00000509281 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
SNX2-208ENST00000509281 BMP2KQ9NSY1 1161 aaPredicted RBP13.91□□□□□ -0.18
SNX2-208ENST00000509281 COLQQ9Y215 455 aaPredicted RBP13.88□□□□□ -0.19
SNX2-208ENST00000509281 TRPC6Q9Y210 931 aa13.86□□□□□ -0.19
SNX2-208ENST00000509281 CCDC61Q9Y6R9 512 aa13.81□□□□□ -0.2
SNX2-208ENST00000509281 KIF12Q96FN5 646 aa13.78□□□□□ -0.2
SNX2-208ENST00000509281 TIE1P35590 1138 aa13.75□□□□□ -0.21
SNX2-208ENST00000509281 SLAIN1Q8ND83 568 aa13.74□□□□□ -0.21
SNX2-208ENST00000509281 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
SNX2-208ENST00000509281 SEC24BO95487 1268 aa13.7□□□□□ -0.22
SNX2-208ENST00000509281 TTLL13PA6NNM8 815 aa13.67□□□□□ -0.22
SNX2-208ENST00000509281 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
SNX2-208ENST00000509281 IER5LQ5T953 404 aa13.62□□□□□ -0.23
SNX2-208ENST00000509281 MAP3K13O43283 966 aa13.61□□□□□ -0.23
SNX2-208ENST00000509281 MARVELD3Q96A59 401 aa13.57□□□□□ -0.24
SNX2-208ENST00000509281 TRIM35Q9UPQ4 493 aa13.56□□□□□ -0.24
SNX2-208ENST00000509281 KRTAP3-3Q9BYR6 98 aa13.54□□□□□ -0.24
SNX2-208ENST00000509281 KRTAP3-2Q9BYR7 98 aa13.54□□□□□ -0.24
SNX2-208ENST00000509281 SPDYE4A6NLX3 237 aa13.49□□□□□ -0.25
SNX2-208ENST00000509281 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
SNX2-208ENST00000509281 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
SNX2-208ENST00000509281 SNPHO15079 494 aa13.41□□□□□ -0.26
SNX2-208ENST00000509281 PLCG2P16885 1265 aa13.37□□□□□ -0.27
SNX2-208ENST00000509281 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
SNX2-208ENST00000509281 RASEFQ8IZ41 740 aa13.36□□□□□ -0.27
SNX2-208ENST00000509281 EMP3P54852 163 aa13.34□□□□□ -0.27
SNX2-208ENST00000509281 HS3ST6Q96QI5 342 aa13.34□□□□□ -0.27
SNX2-208ENST00000509281 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
SNX2-208ENST00000509281 PCDHB13Q9Y5F0 798 aa13.28□□□□□ -0.28
SNX2-208ENST00000509281 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.26□□□□□ -0.29
SNX2-208ENST00000509281 FAM205CA6NFA0 338 aa13.24□□□□□ -0.29
SNX2-208ENST00000509281 TMEM106CQ9BVX2 250 aa13.23□□□□□ -0.29
SNX2-208ENST00000509281 IFNL1Q8IU54 200 aa13.22□□□□□ -0.29
SNX2-208ENST00000509281 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
SNX2-208ENST00000509281 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
SNX2-208ENST00000509281 PROM2Q8N271 834 aa13.12□□□□□ -0.31
SNX2-208ENST00000509281 PDCD7Q8N8D1 485 aaKnown RBP13.01□□□□□ -0.33
SNX2-208ENST00000509281 C3orf67Q6ZVT6 689 aa12.98□□□□□ -0.33
SNX2-208ENST00000509281 MYT1LQ9UL68 1186 aa12.97□□□□□ -0.33
SNX2-208ENST00000509281 NUBP1P53384 320 aa12.96□□□□□ -0.33
SNX2-208ENST00000509281 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
SNX2-208ENST00000509281 MIER1Q8N108 512 aa12.93□□□□□ -0.34
SNX2-208ENST00000509281 HOXB3P14651 431 aaPredicted RBP12.91□□□□□ -0.34
SNX2-208ENST00000509281 HOXB1P14653 301 aaPredicted RBP12.86□□□□□ -0.35
SNX2-208ENST00000509281 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
SNX2-208ENST00000509281 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
SNX2-208ENST00000509281 ERBB3P21860 1342 aa12.8□□□□□ -0.36
SNX2-208ENST00000509281 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
SNX2-208ENST00000509281 PCDHB8Q9UN66 801 aa12.74□□□□□ -0.37
SNX2-208ENST00000509281 PTGER2P43116 358 aa12.73□□□□□ -0.37
SNX2-208ENST00000509281 VARS2Q5ST30 1063 aaKnown RBP12.73□□□□□ -0.37
SNX2-208ENST00000509281 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
SNX2-208ENST00000509281 PYGBP11216 843 aa12.68□□□□□ -0.38
SNX2-208ENST00000509281 ILDR1Q86SU0 546 aaPredicted RBP12.68□□□□□ -0.38
SNX2-208ENST00000509281 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
SNX2-208ENST00000509281 ZNF687Q8N1G0 1237 aa12.67□□□□□ -0.38
SNX2-208ENST00000509281 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
SNX2-208ENST00000509281 MKRN3Q13064 507 aaKnown RBP12.65□□□□□ -0.38
SNX2-208ENST00000509281 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNX2-208ENST00000509281 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
SNX2-208ENST00000509281 PLA2G2EQ9NZK7 142 aa12.62□□□□□ -0.39
SNX2-208ENST00000509281 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
SNX2-208ENST00000509281 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
SNX2-208ENST00000509281 BOLA1Q9Y3E2 137 aa12.53□□□□□ -0.4
SNX2-208ENST00000509281 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
SNX2-208ENST00000509281 DCAF8Q5TAQ9 597 aa12.49□□□□□ -0.41
SNX2-208ENST00000509281 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
SNX2-208ENST00000509281 ZSWIM6Q9HCJ5 1215 aa12.46□□□□□ -0.41
SNX2-208ENST00000509281 GPR153Q6NV75 609 aa12.45□□□□□ -0.42
SNX2-208ENST00000509281 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
SNX2-208ENST00000509281 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNX2-208ENST00000509281 PSEN1P49768 467 aa12.4□□□□□ -0.42
SNX2-208ENST00000509281 G3V3G9 751 aa12.39□□□□□ -0.43
SNX2-208ENST00000509281 HCSTQ9UBK5 93 aa12.37□□□□□ -0.43
SNX2-208ENST00000509281 TMEM92Q6UXU6 159 aa12.34□□□□□ -0.43
SNX2-208ENST00000509281 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
SNX2-208ENST00000509281 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
SNX2-208ENST00000509281 POTEEQ6S8J3 1075 aa12.25□□□□□ -0.45
SNX2-208ENST00000509281 CABP2Q9NPB3 220 aa12.25□□□□□ -0.45
SNX2-208ENST00000509281 ARSIQ5FYB1 569 aa12.24□□□□□ -0.45
SNX2-208ENST00000509281 IRX2Q9BZI1 471 aaPredicted RBP12.23□□□□□ -0.45
SNX2-208ENST00000509281 PDAP1Q13442 181 aaKnown RBP12.21□□□□□ -0.45
SNX2-208ENST00000509281 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.466e-8■■□□□ 13.9
SNX2-208ENST00000509281 PBX2P40425 430 aa12.19□□□□□ -0.46
SNX2-208ENST00000509281 RGS20O76081 388 aa12.17□□□□□ -0.46
SNX2-208ENST00000509281 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
SNX2-208ENST00000509281 GSE1Q14687 1217 aa12.15□□□□□ -0.46
SNX2-208ENST00000509281 AXIN2Q9Y2T1 843 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms