RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 RASEFQ8IZ41 740 aa12.79□□□□□ -0.36
CALCOCO2-212ENST00000509014 PKD2Q13563 968 aa12.78□□□□□ -0.36
CALCOCO2-212ENST00000509014 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
CALCOCO2-212ENST00000509014 CLCN6P51797 869 aa12.77□□□□□ -0.37
CALCOCO2-212ENST00000509014 DCBLD2Q96PD2 775 aa12.75□□□□□ -0.37
CALCOCO2-212ENST00000509014 ZNF579Q8NAF0 562 aaKnown RBP12.73□□□□□ -0.37
CALCOCO2-212ENST00000509014 CIZ1Q9ULV3 898 aaPredicted RBP12.7□□□□□ -0.38
CALCOCO2-212ENST00000509014 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
CALCOCO2-212ENST00000509014 GSE1Q14687 1217 aa12.68□□□□□ -0.38
CALCOCO2-212ENST00000509014 DCAF8Q5TAQ9 597 aa12.67□□□□□ -0.38
CALCOCO2-212ENST00000509014 GALR2O43603 387 aaPredicted RBP12.63□□□□□ -0.39
CALCOCO2-212ENST00000509014 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
CALCOCO2-212ENST00000509014 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
CALCOCO2-212ENST00000509014 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
CALCOCO2-212ENST00000509014 PHF12Q96QT6 1004 aa12.59□□□□□ -0.39
CALCOCO2-212ENST00000509014 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
CALCOCO2-212ENST00000509014 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
CALCOCO2-212ENST00000509014 RGL2O15211 777 aa12.54□□□□□ -0.4
CALCOCO2-212ENST00000509014 PYGBP11216 843 aa12.53□□□□□ -0.4
CALCOCO2-212ENST00000509014 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
CALCOCO2-212ENST00000509014 RNF25Q96BH1 459 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO2-212ENST00000509014 KIF12Q96FN5 646 aa12.44□□□□□ -0.42
CALCOCO2-212ENST00000509014 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
CALCOCO2-212ENST00000509014 MAP3K13O43283 966 aa12.41□□□□□ -0.42
CALCOCO2-212ENST00000509014 PELP1Q8IZL8 1130 aaKnown RBP12.41□□□□□ -0.42
CALCOCO2-212ENST00000509014 RIOK3O14730 519 aaKnown RBP12.4□□□□□ -0.42
CALCOCO2-212ENST00000509014 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
CALCOCO2-212ENST00000509014 DCAF8L2P0C7V8 631 aa12.39□□□□□ -0.43
CALCOCO2-212ENST00000509014 MS4A3Q96HJ5 214 aa12.39□□□□□ -0.43
CALCOCO2-212ENST00000509014 PCDHB8Q9UN66 801 aa12.36□□□□□ -0.43
CALCOCO2-212ENST00000509014 PCDHB13Q9Y5F0 798 aa12.36□□□□□ -0.43
CALCOCO2-212ENST00000509014 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
CALCOCO2-212ENST00000509014 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
CALCOCO2-212ENST00000509014 ZNF467Q7Z7K2 595 aaPredicted RBP12.34□□□□□ -0.43
CALCOCO2-212ENST00000509014 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO2-212ENST00000509014 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO2-212ENST00000509014 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO2-212ENST00000509014 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
CALCOCO2-212ENST00000509014 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
CALCOCO2-212ENST00000509014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
CALCOCO2-212ENST00000509014 SLC39A7Q92504 469 aa12.27□□□□□ -0.45
CALCOCO2-212ENST00000509014 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
CALCOCO2-212ENST00000509014 C7P10643 843 aa12.26□□□□□ -0.45
CALCOCO2-212ENST00000509014 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-212ENST00000509014 PDAP1Q13442 181 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-212ENST00000509014 HS6ST3Q8IZP7 471 aa12.26□□□□□ -0.45
CALCOCO2-212ENST00000509014 TAOK2Q9UL54 1235 aa12.26□□□□□ -0.45
CALCOCO2-212ENST00000509014 TRPC6Q9Y210 931 aa12.26□□□□□ -0.45
CALCOCO2-212ENST00000509014 PSEN1P49768 467 aa12.23□□□□□ -0.45
CALCOCO2-212ENST00000509014 STK25O00506 426 aa12.21□□□□□ -0.45
CALCOCO2-212ENST00000509014 ATN1P54259 1190 aaPredicted RBP12.21□□□□□ -0.45
CALCOCO2-212ENST00000509014 POTEJP0CG39 1038 aa12.2□□□□□ -0.46
CALCOCO2-212ENST00000509014 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
CALCOCO2-212ENST00000509014 POTEMA6NI47 508 aa12.17□□□□□ -0.46
CALCOCO2-212ENST00000509014 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
CALCOCO2-212ENST00000509014 STK24Q9Y6E0 443 aa12.17□□□□□ -0.46
CALCOCO2-212ENST00000509014 BBXQ8WY36 941 aaPredicted RBP12.16□□□□□ -0.46
CALCOCO2-212ENST00000509014 BMP2KQ9NSY1 1161 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO2-212ENST00000509014 TIE1P35590 1138 aa12.14□□□□□ -0.47
CALCOCO2-212ENST00000509014 MAMSTRQ6ZN01 415 aa12.14□□□□□ -0.47
CALCOCO2-212ENST00000509014 NKX1-1Q15270 411 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO2-212ENST00000509014 POTEGQ6S5H5 508 aa12.13□□□□□ -0.47
CALCOCO2-212ENST00000509014 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
CALCOCO2-212ENST00000509014 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
CALCOCO2-212ENST00000509014 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
CALCOCO2-212ENST00000509014 SCUBE2Q9NQ36 999 aa12.08□□□□□ -0.48
CALCOCO2-212ENST00000509014 POTEFA5A3E0 1075 aa12.07□□□□□ -0.48
CALCOCO2-212ENST00000509014 ABCC9O60706 1549 aa12.05□□□□□ -0.48
CALCOCO2-212ENST00000509014 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
CALCOCO2-212ENST00000509014 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO2-212ENST00000509014 PLCB2Q00722 1185 aa12.03□□□□□ -0.48
CALCOCO2-212ENST00000509014 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO2-212ENST00000509014 TRIM35Q9UPQ4 493 aa12.02□□□□□ -0.49
CALCOCO2-212ENST00000509014 SEC24BO95487 1268 aa12.01□□□□□ -0.49
CALCOCO2-212ENST00000509014 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
CALCOCO2-212ENST00000509014 GTPBP6O43824 516 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO2-212ENST00000509014 PAXIP1Q6ZW49 1069 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO2-212ENST00000509014 MFRPQ9BY79 579 aa11.99□□□□□ -0.49
CALCOCO2-212ENST00000509014 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
CALCOCO2-212ENST00000509014 SOX12O15370 315 aa11.96□□□□□ -0.49
CALCOCO2-212ENST00000509014 GOLGA2Q08379 1002 aa11.96□□□□□ -0.49
CALCOCO2-212ENST00000509014 LCE2DQ5TA82 110 aaPredicted RBP11.96□□□□□ -0.49
CALCOCO2-212ENST00000509014 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
CALCOCO2-212ENST00000509014 FBXO22Q8NEZ5 403 aa11.95□□□□□ -0.5
CALCOCO2-212ENST00000509014 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
CALCOCO2-212ENST00000509014 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
CALCOCO2-212ENST00000509014 PCDH10Q9P2E7 1040 aa11.93□□□□□ -0.5
CALCOCO2-212ENST00000509014 ILDR1Q86SU0 546 aaPredicted RBP11.92□□□□□ -0.5
CALCOCO2-212ENST00000509014 IER5LQ5T953 404 aa11.91□□□□□ -0.5
CALCOCO2-212ENST00000509014 MS4A4AQ96JQ5 239 aa11.91□□□□□ -0.5
CALCOCO2-212ENST00000509014 NLRP6P59044 892 aa11.9□□□□□ -0.5
CALCOCO2-212ENST00000509014 IRX5P78411 483 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO2-212ENST00000509014 RYDENQ9NUL5 291 aaKnown RBP11.88□□□□□ -0.51
CALCOCO2-212ENST00000509014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.517e-9■□□□□ 10.5
CALCOCO2-212ENST00000509014 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
CALCOCO2-212ENST00000509014 PPP1R37O75864 691 aa11.85□□□□□ -0.51
CALCOCO2-212ENST00000509014 PDCD7Q8N8D1 485 aaKnown RBP11.85□□□□□ -0.51
CALCOCO2-212ENST00000509014 PLCG2P16885 1265 aa11.82□□□□□ -0.52
CALCOCO2-212ENST00000509014 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
CALCOCO2-212ENST00000509014 SLAIN1Q8ND83 568 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms