RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ZNF579Q8NAF0 562 aaKnown RBP15.09■□□□□ 0.01
DHFR-204ENST00000508282 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
DHFR-204ENST00000508282 PHF12Q96QT6 1004 aa15.06■□□□□ 0
DHFR-204ENST00000508282 GSE1Q14687 1217 aa15.04■□□□□ -0
DHFR-204ENST00000508282 CIZ1Q9ULV3 898 aaPredicted RBP15.02■□□□□ -0
DHFR-204ENST00000508282 GABBR2O75899 941 aa14.95□□□□□ -0.02
DHFR-204ENST00000508282 KIF12Q96FN5 646 aa14.95□□□□□ -0.02
DHFR-204ENST00000508282 PYGBP11216 843 aa14.94□□□□□ -0.02
DHFR-204ENST00000508282 CLCN6P51797 869 aa14.91□□□□□ -0.02
DHFR-204ENST00000508282 MAP3K13O43283 966 aa14.9□□□□□ -0.02
DHFR-204ENST00000508282 GALR2O43603 387 aaPredicted RBP14.87□□□□□ -0.03
DHFR-204ENST00000508282 CHRM1P11229 460 aaPredicted RBP14.87□□□□□ -0.03
DHFR-204ENST00000508282 PKD2Q13563 968 aa14.87□□□□□ -0.03
DHFR-204ENST00000508282 MS4A3Q96HJ5 214 aa14.86□□□□□ -0.03
DHFR-204ENST00000508282 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
DHFR-204ENST00000508282 PCDHB13Q9Y5F0 798 aa14.83□□□□□ -0.04
DHFR-204ENST00000508282 SGIP1Q9BQI5 828 aa14.82□□□□□ -0.04
DHFR-204ENST00000508282 IFNL1Q8IU54 200 aa14.79□□□□□ -0.04
DHFR-204ENST00000508282 ECM2O94769 699 aaPredicted RBP14.77□□□□□ -0.05
DHFR-204ENST00000508282 PCDHB8Q9UN66 801 aa14.75□□□□□ -0.05
DHFR-204ENST00000508282 TRPC6Q9Y210 931 aa14.74□□□□□ -0.05
DHFR-204ENST00000508282 RNF25Q96BH1 459 aaPredicted RBP14.72□□□□□ -0.05
DHFR-204ENST00000508282 ZNF467Q7Z7K2 595 aaPredicted RBP14.71□□□□□ -0.05
DHFR-204ENST00000508282 AMER1Q5JTC6 1135 aaPredicted RBP14.69□□□□□ -0.06
DHFR-204ENST00000508282 RTN4Q9NQC3 1192 aaKnown RBP14.69□□□□□ -0.06
DHFR-204ENST00000508282 POTEIP0CG38 1075 aa14.67□□□□□ -0.06
DHFR-204ENST00000508282 RGL2O15211 777 aa14.66□□□□□ -0.06
DHFR-204ENST00000508282 DCBLD2Q96PD2 775 aa14.66□□□□□ -0.06
DHFR-204ENST00000508282 RIOK3O14730 519 aaKnown RBP14.64□□□□□ -0.07
DHFR-204ENST00000508282 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
DHFR-204ENST00000508282 TIE1P35590 1138 aa14.63□□□□□ -0.07
DHFR-204ENST00000508282 ATMINO43313 823 aaPredicted RBP14.6□□□□□ -0.07
DHFR-204ENST00000508282 ASTLQ6HA08 431 aaPredicted RBP14.6□□□□□ -0.07
DHFR-204ENST00000508282 TTLL13PA6NNM8 815 aa14.59□□□□□ -0.07
DHFR-204ENST00000508282 PSEN1P49768 467 aa14.58□□□□□ -0.08
DHFR-204ENST00000508282 PDAP1Q13442 181 aaKnown RBP14.58□□□□□ -0.08
DHFR-204ENST00000508282 TMEM106CQ9BVX2 250 aa14.58□□□□□ -0.08
DHFR-204ENST00000508282 ATN1P54259 1190 aaPredicted RBP14.56□□□□□ -0.08
DHFR-204ENST00000508282 VGFO15240 615 aaPredicted RBP14.54□□□□□ -0.08
DHFR-204ENST00000508282 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
DHFR-204ENST00000508282 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.5□□□□□ -0.09
DHFR-204ENST00000508282 ZFP91Q96JP5 570 aaPredicted RBP14.5□□□□□ -0.09
DHFR-204ENST00000508282 TRIM35Q9UPQ4 493 aa14.49□□□□□ -0.09
DHFR-204ENST00000508282 TAOK2Q9UL54 1235 aa14.47□□□□□ -0.09
DHFR-204ENST00000508282 BCL11BQ9C0K0 894 aaPredicted RBP14.4□□□□□ -0.1
DHFR-204ENST00000508282 CABP2Q9NPB3 220 aa14.4□□□□□ -0.1
DHFR-204ENST00000508282 STK25O00506 426 aa14.39□□□□□ -0.11
DHFR-204ENST00000508282 SLC39A7Q92504 469 aa14.39□□□□□ -0.11
DHFR-204ENST00000508282 C7P10643 843 aa14.37□□□□□ -0.11
DHFR-204ENST00000508282 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
DHFR-204ENST00000508282 METRNQ9UJH8 293 aa14.36□□□□□ -0.11
DHFR-204ENST00000508282 STK24Q9Y6E0 443 aa14.36□□□□□ -0.11
DHFR-204ENST00000508282 GOLGA2Q08379 1002 aa14.35□□□□□ -0.11
DHFR-204ENST00000508282 IER5LQ5T953 404 aa14.35□□□□□ -0.11
DHFR-204ENST00000508282 CHGAP10645 457 aaKnown RBP14.33□□□□□ -0.12
DHFR-204ENST00000508282 HS6ST3Q8IZP7 471 aa14.33□□□□□ -0.12
DHFR-204ENST00000508282 MKRN3Q13064 507 aaKnown RBP14.32□□□□□ -0.12
DHFR-204ENST00000508282 EFCAB3Q8N7B9 438 aa14.32□□□□□ -0.12
DHFR-204ENST00000508282 POTEFA5A3E0 1075 aa14.31□□□□□ -0.12
DHFR-204ENST00000508282 COLQQ9Y215 455 aaPredicted RBP14.3□□□□□ -0.12
DHFR-204ENST00000508282 IRX5P78411 483 aaPredicted RBP14.29□□□□□ -0.12
DHFR-204ENST00000508282 SEC24BO95487 1268 aa14.25□□□□□ -0.13
DHFR-204ENST00000508282 ILDR1Q86SU0 546 aaPredicted RBP14.23□□□□□ -0.13
DHFR-204ENST00000508282 OCEL1Q9H607 264 aa14.23□□□□□ -0.13
DHFR-204ENST00000508282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.23□□□□□ -0.137e-43■■□□□ 14
DHFR-204ENST00000508282 SOX12O15370 315 aa14.22□□□□□ -0.13
DHFR-204ENST00000508282 PLCG2P16885 1265 aa14.22□□□□□ -0.13
DHFR-204ENST00000508282 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
DHFR-204ENST00000508282 PDCD7Q8N8D1 485 aaKnown RBP14.21□□□□□ -0.13
DHFR-204ENST00000508282 DNAJC5Q9H3Z4 198 aa14.2□□□□□ -0.14
DHFR-204ENST00000508282 PHF8Q9UPP1 1060 aa14.19□□□□□ -0.14
DHFR-204ENST00000508282 MFRPQ9BY79 579 aa14.18□□□□□ -0.14
DHFR-204ENST00000508282 NKX1-1Q15270 411 aaPredicted RBP14.17□□□□□ -0.14
DHFR-204ENST00000508282 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
DHFR-204ENST00000508282 LHX8Q68G74 356 aa14.14□□□□□ -0.15
DHFR-204ENST00000508282 FBXO22Q8NEZ5 403 aa14.14□□□□□ -0.15
DHFR-204ENST00000508282 MS4A4AQ96JQ5 239 aa14.14□□□□□ -0.15
DHFR-204ENST00000508282 DPY19L2Q6NUT2 758 aa14.13□□□□□ -0.15
DHFR-204ENST00000508282 NLRP6P59044 892 aa14.12□□□□□ -0.15
DHFR-204ENST00000508282 BBXQ8WY36 941 aaPredicted RBP14.06□□□□□ -0.16
DHFR-204ENST00000508282 L3MBTL3Q96JM7 780 aaPredicted RBP14.02□□□□□ -0.17
DHFR-204ENST00000508282 BOLA1Q9Y3E2 137 aa14□□□□□ -0.17
DHFR-204ENST00000508282 GTPBP6O43824 516 aaPredicted RBP13.99□□□□□ -0.17
DHFR-204ENST00000508282 PPP1R37O75864 691 aa13.99□□□□□ -0.17
DHFR-204ENST00000508282 OTUD5Q96G74 571 aa13.99□□□□□ -0.17
DHFR-204ENST00000508282 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.17
DHFR-204ENST00000508282 TMEM121BQ9BXQ6 578 aaPredicted RBP13.96□□□□□ -0.17
DHFR-204ENST00000508282 RYDENQ9NUL5 291 aaKnown RBP13.95□□□□□ -0.18
DHFR-204ENST00000508282 MICALL2Q8IY33 904 aa13.94□□□□□ -0.18
DHFR-204ENST00000508282 SCUBE2Q9NQ36 999 aa13.94□□□□□ -0.18
DHFR-204ENST00000508282 G3V3G9 751 aa13.92□□□□□ -0.18
DHFR-204ENST00000508282 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.92□□□□□ -0.18
DHFR-204ENST00000508282 C3orf67Q6ZVT6 689 aa13.89□□□□□ -0.19
DHFR-204ENST00000508282 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.87□□□□□ -0.19
DHFR-204ENST00000508282 SPRYD3Q8NCJ5 442 aa13.86□□□□□ -0.19
DHFR-204ENST00000508282 PAXIP1Q6ZW49 1069 aaPredicted RBP13.85□□□□□ -0.19
DHFR-204ENST00000508282 SLAIN1Q8ND83 568 aa13.82□□□□□ -0.2
DHFR-204ENST00000508282 CFAP44Q96MT7 982 aa13.82□□□□□ -0.2
DHFR-204ENST00000508282 TMEM92Q6UXU6 159 aa13.8□□□□□ -0.2
DHFR-204ENST00000508282 KIF3CO14782 793 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms