RNA–Protein interactions for RNA: ENST00000508130.5

SLF1-207, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 1,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-207ENST00000508130 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
SLF1-207ENST00000508130 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
SLF1-207ENST00000508130 ATMINO43313 823 aaPredicted RBP11.41□□□□□ -0.58
SLF1-207ENST00000508130 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
SLF1-207ENST00000508130 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
SLF1-207ENST00000508130 RASEFQ8IZ41 740 aa11.38□□□□□ -0.59
SLF1-207ENST00000508130 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
SLF1-207ENST00000508130 C7P10643 843 aa11.34□□□□□ -0.59
SLF1-207ENST00000508130 ATN1P54259 1190 aaPredicted RBP11.34□□□□□ -0.59
SLF1-207ENST00000508130 PLCD3Q8N3E9 789 aa11.34□□□□□ -0.59
SLF1-207ENST00000508130 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
SLF1-207ENST00000508130 MAP3K13O43283 966 aa11.33□□□□□ -0.6
SLF1-207ENST00000508130 TRPC6Q9Y210 931 aa11.33□□□□□ -0.6
SLF1-207ENST00000508130 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
SLF1-207ENST00000508130 FKBP8Q14318 412 aa11.29□□□□□ -0.6
SLF1-207ENST00000508130 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
SLF1-207ENST00000508130 NUBP1P53384 320 aa11.23□□□□□ -0.61
SLF1-207ENST00000508130 POTEFA5A3E0 1075 aa11.22□□□□□ -0.61
SLF1-207ENST00000508130 TIE1P35590 1138 aa11.21□□□□□ -0.61
SLF1-207ENST00000508130 ZBTB47Q9UFB7 747 aaPredicted RBP11.2□□□□□ -0.62
SLF1-207ENST00000508130 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
SLF1-207ENST00000508130 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
SLF1-207ENST00000508130 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
SLF1-207ENST00000508130 POTEMA6NI47 508 aa11.18□□□□□ -0.62
SLF1-207ENST00000508130 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
SLF1-207ENST00000508130 COLQQ9Y215 455 aaPredicted RBP11.15□□□□□ -0.62
SLF1-207ENST00000508130 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
SLF1-207ENST00000508130 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
SLF1-207ENST00000508130 FAM212AQ96EL1 285 aa11.13□□□□□ -0.63
SLF1-207ENST00000508130 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
SLF1-207ENST00000508130 SEC24BO95487 1268 aa11.12□□□□□ -0.63
SLF1-207ENST00000508130 TRIM35Q9UPQ4 493 aa11.12□□□□□ -0.63
SLF1-207ENST00000508130 FAM163AQ96GL9 167 aaPredicted RBP11.09□□□□□ -0.63
SLF1-207ENST00000508130 LCE2DQ5TA82 110 aaPredicted RBP11.07□□□□□ -0.64
SLF1-207ENST00000508130 DCAF8Q5TAQ9 597 aa11.07□□□□□ -0.64
SLF1-207ENST00000508130 TMEM106CQ9BVX2 250 aa11.06□□□□□ -0.64
SLF1-207ENST00000508130 PYGBP11216 843 aa11.04□□□□□ -0.64
SLF1-207ENST00000508130 IER5LQ5T953 404 aa11.04□□□□□ -0.64
SLF1-207ENST00000508130 FBXO3Q9UK99 471 aa11.03□□□□□ -0.64
SLF1-207ENST00000508130 PCDHB8Q9UN66 801 aa10.99□□□□□ -0.65
SLF1-207ENST00000508130 PCDH10Q9P2E7 1040 aa10.98□□□□□ -0.65
SLF1-207ENST00000508130 KLHL34Q8N239 644 aa10.96□□□□□ -0.65
SLF1-207ENST00000508130 PLCG2P16885 1265 aa10.94□□□□□ -0.66
SLF1-207ENST00000508130 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
SLF1-207ENST00000508130 IRX5P78411 483 aaPredicted RBP10.94□□□□□ -0.66
SLF1-207ENST00000508130 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
SLF1-207ENST00000508130 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
SLF1-207ENST00000508130 GSE1Q14687 1217 aa10.87□□□□□ -0.67
SLF1-207ENST00000508130 ST18O60284 1047 aa10.83□□□□□ -0.68
SLF1-207ENST00000508130 ZNF467Q7Z7K2 595 aaPredicted RBP10.81□□□□□ -0.68
SLF1-207ENST00000508130 CHRM1P11229 460 aaPredicted RBP10.79□□□□□ -0.68
SLF1-207ENST00000508130 CDAN1Q8IWY9 1227 aa10.79□□□□□ -0.68
SLF1-207ENST00000508130 GOLGA2Q08379 1002 aa10.77□□□□□ -0.69
SLF1-207ENST00000508130 IFNLR1Q8IU57 520 aaPredicted RBP10.77□□□□□ -0.69
SLF1-207ENST00000508130 PSEN1P49768 467 aa10.76□□□□□ -0.69
SLF1-207ENST00000508130 PDCD7Q8N8D1 485 aaKnown RBP10.76□□□□□ -0.69
SLF1-207ENST00000508130 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
SLF1-207ENST00000508130 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
SLF1-207ENST00000508130 CIZ1Q9ULV3 898 aaPredicted RBP10.73□□□□□ -0.69
SLF1-207ENST00000508130 SPOCK2Q92563 424 aa10.72□□□□□ -0.69
SLF1-207ENST00000508130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.71□□□□□ -0.69
SLF1-207ENST00000508130 PDAP1Q13442 181 aaKnown RBP10.68□□□□□ -0.7
SLF1-207ENST00000508130 SNPHO15079 494 aa10.67□□□□□ -0.7
SLF1-207ENST00000508130 C3orf67Q6ZVT6 689 aa10.67□□□□□ -0.7
SLF1-207ENST00000508130 MARVELD3Q96A59 401 aa10.67□□□□□ -0.7
SLF1-207ENST00000508130 L3MBTL3Q96JM7 780 aaPredicted RBP10.67□□□□□ -0.7
SLF1-207ENST00000508130 DPY19L2Q6NUT2 758 aa10.66□□□□□ -0.7
SLF1-207ENST00000508130 CABP2Q9NPB3 220 aa10.65□□□□□ -0.7
SLF1-207ENST00000508130 TMEM121BQ9BXQ6 578 aaPredicted RBP10.64□□□□□ -0.71
SLF1-207ENST00000508130 ILDR1Q86SU0 546 aaPredicted RBP10.62□□□□□ -0.71
SLF1-207ENST00000508130 EMP3P54852 163 aa10.54□□□□□ -0.72
SLF1-207ENST00000508130 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
SLF1-207ENST00000508130 SPNS2Q8IVW8 549 aa10.53□□□□□ -0.72
SLF1-207ENST00000508130 G3V3G9 751 aa10.52□□□□□ -0.73
SLF1-207ENST00000508130 EFCAB3Q8N7B9 438 aa10.52□□□□□ -0.73
SLF1-207ENST00000508130 POTEB3A0JP26 581 aa10.51□□□□□ -0.73
SLF1-207ENST00000508130 POTEBQ6S5H4 581 aa10.51□□□□□ -0.73
SLF1-207ENST00000508130 MMRN1Q13201 1228 aa10.49□□□□□ -0.73
SLF1-207ENST00000508130 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
SLF1-207ENST00000508130 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
SLF1-207ENST00000508130 HS3ST6Q96QI5 342 aa10.47□□□□□ -0.73
SLF1-207ENST00000508130 HOXB3P14651 431 aaPredicted RBP10.46□□□□□ -0.73
SLF1-207ENST00000508130 RNF25Q96BH1 459 aaPredicted RBP10.43□□□□□ -0.74
SLF1-207ENST00000508130 KRTAP3-3Q9BYR6 98 aa10.42□□□□□ -0.74
SLF1-207ENST00000508130 KRTAP3-2Q9BYR7 98 aa10.42□□□□□ -0.74
SLF1-207ENST00000508130 RIOK3O14730 519 aaKnown RBP10.41□□□□□ -0.74
SLF1-207ENST00000508130 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.39□□□□□ -0.75
SLF1-207ENST00000508130 ZNF710Q8N1W2 664 aa10.39□□□□□ -0.75
SLF1-207ENST00000508130 ZFP91Q96JP5 570 aaPredicted RBP10.39□□□□□ -0.75
SLF1-207ENST00000508130 HOXB1P14653 301 aaPredicted RBP10.37□□□□□ -0.75
SLF1-207ENST00000508130 TMEM92Q6UXU6 159 aa10.37□□□□□ -0.75
SLF1-207ENST00000508130 MICALL2Q8IY33 904 aa10.37□□□□□ -0.75
SLF1-207ENST00000508130 SOX12O15370 315 aa10.36□□□□□ -0.75
SLF1-207ENST00000508130 DOK7Q18PE1 504 aa10.36□□□□□ -0.75
SLF1-207ENST00000508130 MS4A4AQ96JQ5 239 aa10.36□□□□□ -0.75
SLF1-207ENST00000508130 PHF8Q9UPP1 1060 aa10.35□□□□□ -0.75
SLF1-207ENST00000508130 VGFO15240 615 aaPredicted RBP10.34□□□□□ -0.75
SLF1-207ENST00000508130 ERBB3P21860 1342 aa10.33□□□□□ -0.76
SLF1-207ENST00000508130 RIMBP2O15034 1052 aa10.28□□□□□ -0.76
SLF1-207ENST00000508130 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms