RNA–Protein interactions for RNA: ENST00000508099.5

LINC02428-201, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 5 BASIC

Gene LINC02428, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-201ENST00000508099 PLEKHG5O94827 1062 aa15.71■□□□□ 0.11
LINC02428-201ENST00000508099 CCDC61Q9Y6R9 512 aa15.7■□□□□ 0.1
LINC02428-201ENST00000508099 ATMINO43313 823 aaPredicted RBP15.68■□□□□ 0.1
LINC02428-201ENST00000508099 SLC39A7Q92504 469 aa15.66■□□□□ 0.1
LINC02428-201ENST00000508099 METRNQ9UJH8 293 aa15.65■□□□□ 0.1
LINC02428-201ENST00000508099 C7P10643 843 aa15.64■□□□□ 0.09
LINC02428-201ENST00000508099 MIER1Q8N108 512 aa15.64■□□□□ 0.09
LINC02428-201ENST00000508099 KIF12Q96FN5 646 aa15.61■□□□□ 0.09
LINC02428-201ENST00000508099 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
LINC02428-201ENST00000508099 ATN1P54259 1190 aaPredicted RBP15.53■□□□□ 0.08
LINC02428-201ENST00000508099 PLCD3Q8N3E9 789 aa15.52■□□□□ 0.08
LINC02428-201ENST00000508099 MAP3K13O43283 966 aa15.5■□□□□ 0.07
LINC02428-201ENST00000508099 MAMSTRQ6ZN01 415 aa15.5■□□□□ 0.07
LINC02428-201ENST00000508099 BMP2KQ9NSY1 1161 aaPredicted RBP15.49■□□□□ 0.07
LINC02428-201ENST00000508099 POTEJP0CG39 1038 aa15.47■□□□□ 0.07
LINC02428-201ENST00000508099 TIE1P35590 1138 aa15.47■□□□□ 0.07
LINC02428-201ENST00000508099 ZBTB47Q9UFB7 747 aaPredicted RBP15.46■□□□□ 0.07
LINC02428-201ENST00000508099 TRPC6Q9Y210 931 aa15.45■□□□□ 0.06
LINC02428-201ENST00000508099 POTEMA6NI47 508 aa15.4■□□□□ 0.06
LINC02428-201ENST00000508099 SGIP1Q9BQI5 828 aa15.39■□□□□ 0.05
LINC02428-201ENST00000508099 SCUBE2Q9NQ36 999 aa15.39■□□□□ 0.05
LINC02428-201ENST00000508099 NUBP1P53384 320 aa15.36■□□□□ 0.05
LINC02428-201ENST00000508099 POTEGQ6S5H5 508 aa15.36■□□□□ 0.05
LINC02428-201ENST00000508099 POTEFA5A3E0 1075 aa15.35■□□□□ 0.05
LINC02428-201ENST00000508099 TTLL13PA6NNM8 815 aa15.35■□□□□ 0.05
LINC02428-201ENST00000508099 FKBP8Q14318 412 aa15.34■□□□□ 0.05
LINC02428-201ENST00000508099 PCDHB13Q9Y5F0 798 aa15.34■□□□□ 0.05
LINC02428-201ENST00000508099 FAM212AQ96EL1 285 aa15.3■□□□□ 0.04
LINC02428-201ENST00000508099 SEC24BO95487 1268 aa15.27■□□□□ 0.04
LINC02428-201ENST00000508099 IER5LQ5T953 404 aa15.27■□□□□ 0.04
LINC02428-201ENST00000508099 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
LINC02428-201ENST00000508099 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
LINC02428-201ENST00000508099 IFNL1Q8IU54 200 aa15.23■□□□□ 0.03
LINC02428-201ENST00000508099 PCDH10Q9P2E7 1040 aa15.22■□□□□ 0.03
LINC02428-201ENST00000508099 LCE2DQ5TA82 110 aaPredicted RBP15.19■□□□□ 0.02
LINC02428-201ENST00000508099 FAM163AQ96GL9 167 aaPredicted RBP15.17■□□□□ 0.02
LINC02428-201ENST00000508099 TMEM106CQ9BVX2 250 aa15.16■□□□□ 0.02
LINC02428-201ENST00000508099 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
LINC02428-201ENST00000508099 DCAF8Q5TAQ9 597 aa15.09■□□□□ 0.01
LINC02428-201ENST00000508099 PLCG2P16885 1265 aa15.06■□□□□ 0
LINC02428-201ENST00000508099 PYGBP11216 843 aa15.05■□□□□ -0
LINC02428-201ENST00000508099 IRX5P78411 483 aaPredicted RBP15.02■□□□□ -0
LINC02428-201ENST00000508099 SLAIN1Q8ND83 568 aa15□□□□□ -0.01
LINC02428-201ENST00000508099 OCEL1Q9H607 264 aa14.96□□□□□ -0.01
LINC02428-201ENST00000508099 PCDHB8Q9UN66 801 aa14.96□□□□□ -0.01
LINC02428-201ENST00000508099 VASPP50552 380 aaPredicted RBP14.95□□□□□ -0.02
LINC02428-201ENST00000508099 GSE1Q14687 1217 aa14.93□□□□□ -0.02
LINC02428-201ENST00000508099 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
LINC02428-201ENST00000508099 ZNF467Q7Z7K2 595 aaPredicted RBP14.89□□□□□ -0.03
LINC02428-201ENST00000508099 ST18O60284 1047 aa14.86□□□□□ -0.03
LINC02428-201ENST00000508099 CHRM1P11229 460 aaPredicted RBP14.83□□□□□ -0.04
LINC02428-201ENST00000508099 CDAN1Q8IWY9 1227 aa14.83□□□□□ -0.04
LINC02428-201ENST00000508099 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.82□□□□□ -0.04
LINC02428-201ENST00000508099 GOLGA2Q08379 1002 aa14.79□□□□□ -0.04
LINC02428-201ENST00000508099 SNPHO15079 494 aa14.77□□□□□ -0.05
LINC02428-201ENST00000508099 PDCD7Q8N8D1 485 aaKnown RBP14.77□□□□□ -0.05
LINC02428-201ENST00000508099 MKRN3Q13064 507 aaKnown RBP14.76□□□□□ -0.05
LINC02428-201ENST00000508099 TMEM121BQ9BXQ6 578 aaPredicted RBP14.76□□□□□ -0.05
LINC02428-201ENST00000508099 PSEN1P49768 467 aa14.73□□□□□ -0.05
LINC02428-201ENST00000508099 L3MBTL3Q96JM7 780 aaPredicted RBP14.71□□□□□ -0.05
LINC02428-201ENST00000508099 C3orf67Q6ZVT6 689 aa14.7□□□□□ -0.06
LINC02428-201ENST00000508099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.68□□□□□ -0.06
LINC02428-201ENST00000508099 SPOCK2Q92563 424 aa14.67□□□□□ -0.06
LINC02428-201ENST00000508099 PDAP1Q13442 181 aaKnown RBP14.66□□□□□ -0.06
LINC02428-201ENST00000508099 IFNLR1Q8IU57 520 aaPredicted RBP14.63□□□□□ -0.07
LINC02428-201ENST00000508099 ILDR1Q86SU0 546 aaPredicted RBP14.61□□□□□ -0.07
LINC02428-201ENST00000508099 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
LINC02428-201ENST00000508099 MARVELD3Q96A59 401 aa14.58□□□□□ -0.08
LINC02428-201ENST00000508099 CABP2Q9NPB3 220 aa14.55□□□□□ -0.08
LINC02428-201ENST00000508099 EMP3P54852 163 aa14.5□□□□□ -0.09
LINC02428-201ENST00000508099 G3V3G9 751 aa14.49□□□□□ -0.09
LINC02428-201ENST00000508099 DPY19L2Q6NUT2 758 aa14.49□□□□□ -0.09
LINC02428-201ENST00000508099 SPNS2Q8IVW8 549 aa14.48□□□□□ -0.09
LINC02428-201ENST00000508099 TRIM41Q8WV44 630 aa14.47□□□□□ -0.09
LINC02428-201ENST00000508099 BOLA1Q9Y3E2 137 aa14.47□□□□□ -0.09
LINC02428-201ENST00000508099 MMRN1Q13201 1228 aa14.45□□□□□ -0.1
LINC02428-201ENST00000508099 HS3ST6Q96QI5 342 aa14.39□□□□□ -0.11
LINC02428-201ENST00000508099 FAM205CA6NFA0 338 aa14.37□□□□□ -0.11
LINC02428-201ENST00000508099 POTEB3A0JP26 581 aa14.34□□□□□ -0.11
LINC02428-201ENST00000508099 HOXB3P14651 431 aaPredicted RBP14.34□□□□□ -0.11
LINC02428-201ENST00000508099 POTEBQ6S5H4 581 aa14.34□□□□□ -0.11
LINC02428-201ENST00000508099 EFCAB3Q8N7B9 438 aa14.34□□□□□ -0.11
LINC02428-201ENST00000508099 KRTAP3-3Q9BYR6 98 aa14.32□□□□□ -0.12
LINC02428-201ENST00000508099 KRTAP3-2Q9BYR7 98 aa14.32□□□□□ -0.12
LINC02428-201ENST00000508099 DOK7Q18PE1 504 aa14.29□□□□□ -0.12
LINC02428-201ENST00000508099 ZNF710Q8N1W2 664 aa14.29□□□□□ -0.12
LINC02428-201ENST00000508099 HOXB1P14653 301 aaPredicted RBP14.27□□□□□ -0.13
LINC02428-201ENST00000508099 RIOK3O14730 519 aaKnown RBP14.25□□□□□ -0.13
LINC02428-201ENST00000508099 SOX12O15370 315 aa14.23□□□□□ -0.13
LINC02428-201ENST00000508099 RIMBP2O15034 1052 aa14.22□□□□□ -0.13
LINC02428-201ENST00000508099 MICALL2Q8IY33 904 aa14.22□□□□□ -0.13
LINC02428-201ENST00000508099 VGFO15240 615 aaPredicted RBP14.2□□□□□ -0.14
LINC02428-201ENST00000508099 RNF25Q96BH1 459 aaPredicted RBP14.2□□□□□ -0.14
LINC02428-201ENST00000508099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
LINC02428-201ENST00000508099 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
LINC02428-201ENST00000508099 ERBB3P21860 1342 aa14.17□□□□□ -0.14
LINC02428-201ENST00000508099 TMEM92Q6UXU6 159 aa14.15□□□□□ -0.14
LINC02428-201ENST00000508099 MS4A4AQ96JQ5 239 aa14.15□□□□□ -0.14
LINC02428-201ENST00000508099 ZSWIM6Q9HCJ5 1215 aa14.14□□□□□ -0.15
LINC02428-201ENST00000508099 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms