RNA–Protein interactions for RNA: ENST00000505348.1

AC016550.1-201, humanhuman

BASIC

Gene AC016550.1, Length 785 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016550.1-201ENST00000505348 MS4A3Q96HJ5 214 aa16.41■□□□□ 0.22
AC016550.1-201ENST00000505348 METRNQ9UJH8 293 aa16.37■□□□□ 0.21
AC016550.1-201ENST00000505348 ATMINO43313 823 aaPredicted RBP16.35■□□□□ 0.21
AC016550.1-201ENST00000505348 PCDH10Q9P2E7 1040 aa16.32■□□□□ 0.2
AC016550.1-201ENST00000505348 POTEJP0CG39 1038 aa16.31■□□□□ 0.2
AC016550.1-201ENST00000505348 SLC39A7Q92504 469 aa16.31■□□□□ 0.2
AC016550.1-201ENST00000505348 C7P10643 843 aa16.3■□□□□ 0.2
AC016550.1-201ENST00000505348 PROM2Q8N271 834 aa16.26■□□□□ 0.19
AC016550.1-201ENST00000505348 CCDC61Q9Y6R9 512 aa16.22■□□□□ 0.19
AC016550.1-201ENST00000505348 TSPYL2Q9H2G4 693 aaPredicted RBP16.21■□□□□ 0.19
AC016550.1-201ENST00000505348 MAMSTRQ6ZN01 415 aa16.18■□□□□ 0.18
AC016550.1-201ENST00000505348 ATN1P54259 1190 aaPredicted RBP16.17■□□□□ 0.18
AC016550.1-201ENST00000505348 LCE2DQ5TA82 110 aaPredicted RBP16.14■□□□□ 0.17
AC016550.1-201ENST00000505348 KIF12Q96FN5 646 aa16.14■□□□□ 0.17
AC016550.1-201ENST00000505348 BMP2KQ9NSY1 1161 aaPredicted RBP16.09■□□□□ 0.17
AC016550.1-201ENST00000505348 POTEFA5A3E0 1075 aa16.08■□□□□ 0.16
AC016550.1-201ENST00000505348 SCUBE2Q9NQ36 999 aa16.07■□□□□ 0.16
AC016550.1-201ENST00000505348 TRPC6Q9Y210 931 aa16.07■□□□□ 0.16
AC016550.1-201ENST00000505348 MAP3K13O43283 966 aa16■□□□□ 0.15
AC016550.1-201ENST00000505348 TIE1P35590 1138 aa16■□□□□ 0.15
AC016550.1-201ENST00000505348 RASEFQ8IZ41 740 aa15.98■□□□□ 0.15
AC016550.1-201ENST00000505348 FAM163AQ96GL9 167 aaPredicted RBP15.97■□□□□ 0.15
AC016550.1-201ENST00000505348 TTLL13PA6NNM8 815 aa15.91■□□□□ 0.14
AC016550.1-201ENST00000505348 PLEKHG5O94827 1062 aa15.9■□□□□ 0.14
AC016550.1-201ENST00000505348 COLQQ9Y215 455 aaPredicted RBP15.9■□□□□ 0.14
AC016550.1-201ENST00000505348 MIER1Q8N108 512 aa15.89■□□□□ 0.13
AC016550.1-201ENST00000505348 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
AC016550.1-201ENST00000505348 SEC24BO95487 1268 aa15.81■□□□□ 0.12
AC016550.1-201ENST00000505348 SGIP1Q9BQI5 828 aa15.81■□□□□ 0.12
AC016550.1-201ENST00000505348 IER5LQ5T953 404 aa15.8■□□□□ 0.12
AC016550.1-201ENST00000505348 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
AC016550.1-201ENST00000505348 PCDHB13Q9Y5F0 798 aa15.76■□□□□ 0.11
AC016550.1-201ENST00000505348 NUBP1P53384 320 aa15.72■□□□□ 0.11
AC016550.1-201ENST00000505348 PLCD3Q8N3E9 789 aa15.71■□□□□ 0.11
AC016550.1-201ENST00000505348 IFNL1Q8IU54 200 aa15.69■□□□□ 0.1
AC016550.1-201ENST00000505348 CDAN1Q8IWY9 1227 aa15.68■□□□□ 0.1
AC016550.1-201ENST00000505348 VASPP50552 380 aaPredicted RBP15.66■□□□□ 0.1
AC016550.1-201ENST00000505348 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
AC016550.1-201ENST00000505348 SLAIN1Q8ND83 568 aa15.63■□□□□ 0.09
AC016550.1-201ENST00000505348 TMEM106CQ9BVX2 250 aa15.61■□□□□ 0.09
AC016550.1-201ENST00000505348 ST18O60284 1047 aa15.6■□□□□ 0.09
AC016550.1-201ENST00000505348 FAM212AQ96EL1 285 aa15.58■□□□□ 0.08
AC016550.1-201ENST00000505348 IRX5P78411 483 aaPredicted RBP15.57■□□□□ 0.08
AC016550.1-201ENST00000505348 PLCG2P16885 1265 aa15.56■□□□□ 0.08
AC016550.1-201ENST00000505348 IFNLR1Q8IU57 520 aaPredicted RBP15.51■□□□□ 0.07
AC016550.1-201ENST00000505348 OCEL1Q9H607 264 aa15.44■□□□□ 0.06
AC016550.1-201ENST00000505348 TMEM121BQ9BXQ6 578 aaPredicted RBP15.42■□□□□ 0.06
AC016550.1-201ENST00000505348 PYGBP11216 843 aa15.38■□□□□ 0.05
AC016550.1-201ENST00000505348 MMRN1Q13201 1228 aa15.37■□□□□ 0.05
AC016550.1-201ENST00000505348 SNPHO15079 494 aa15.33■□□□□ 0.04
AC016550.1-201ENST00000505348 DCAF8Q5TAQ9 597 aa15.33■□□□□ 0.04
AC016550.1-201ENST00000505348 SPNS2Q8IVW8 549 aa15.33■□□□□ 0.04
AC016550.1-201ENST00000505348 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.33■□□□□ 0.04
AC016550.1-201ENST00000505348 PCDHB8Q9UN66 801 aa15.33■□□□□ 0.04
AC016550.1-201ENST00000505348 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
AC016550.1-201ENST00000505348 MARVELD3Q96A59 401 aa15.28■□□□□ 0.04
AC016550.1-201ENST00000505348 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.04
AC016550.1-201ENST00000505348 AMER1Q5JTC6 1135 aaPredicted RBP15.26■□□□□ 0.03
AC016550.1-201ENST00000505348 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
AC016550.1-201ENST00000505348 SPOCK2Q92563 424 aa15.22■□□□□ 0.03
AC016550.1-201ENST00000505348 C3orf67Q6ZVT6 689 aa15.17■□□□□ 0.02
AC016550.1-201ENST00000505348 ZNF467Q7Z7K2 595 aaPredicted RBP15.16■□□□□ 0.02
AC016550.1-201ENST00000505348 EMP3P54852 163 aa15.12■□□□□ 0.01
AC016550.1-201ENST00000505348 MKRN3Q13064 507 aaKnown RBP15.12■□□□□ 0.01
AC016550.1-201ENST00000505348 L3MBTL3Q96JM7 780 aaPredicted RBP15.12■□□□□ 0.01
AC016550.1-201ENST00000505348 GOLGA2Q08379 1002 aa15.1■□□□□ 0.01
AC016550.1-201ENST00000505348 GSE1Q14687 1217 aa15.1■□□□□ 0.01
AC016550.1-201ENST00000505348 POTEB3A0JP26 581 aa15.08■□□□□ 0
AC016550.1-201ENST00000505348 POTEBQ6S5H4 581 aa15.08■□□□□ 0
AC016550.1-201ENST00000505348 KRTAP3-3Q9BYR6 98 aa15.08■□□□□ 0
AC016550.1-201ENST00000505348 KRTAP3-2Q9BYR7 98 aa15.08■□□□□ 0
AC016550.1-201ENST00000505348 CHRM1P11229 460 aaPredicted RBP15.07■□□□□ 0
AC016550.1-201ENST00000505348 PKD2Q13563 968 aa15.07■□□□□ 0
AC016550.1-201ENST00000505348 ILDR1Q86SU0 546 aaPredicted RBP15.06■□□□□ 0
AC016550.1-201ENST00000505348 HS3ST6Q96QI5 342 aa15.06■□□□□ 0
AC016550.1-201ENST00000505348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.06■□□□□ 0
AC016550.1-201ENST00000505348 PSEN1P49768 467 aa15.04■□□□□ -0
AC016550.1-201ENST00000505348 FAM205CA6NFA0 338 aa15□□□□□ -0.01
AC016550.1-201ENST00000505348 DPY19L2Q6NUT2 758 aa14.94□□□□□ -0.02
AC016550.1-201ENST00000505348 PDAP1Q13442 181 aaKnown RBP14.93□□□□□ -0.02
AC016550.1-201ENST00000505348 HOXB3P14651 431 aaPredicted RBP14.91□□□□□ -0.02
AC016550.1-201ENST00000505348 CIZ1Q9ULV3 898 aaPredicted RBP14.89□□□□□ -0.03
AC016550.1-201ENST00000505348 BOLA1Q9Y3E2 137 aa14.88□□□□□ -0.03
AC016550.1-201ENST00000505348 CABP2Q9NPB3 220 aa14.85□□□□□ -0.03
AC016550.1-201ENST00000505348 ECM2O94769 699 aaPredicted RBP14.82□□□□□ -0.04
AC016550.1-201ENST00000505348 HOXB1P14653 301 aaPredicted RBP14.82□□□□□ -0.04
AC016550.1-201ENST00000505348 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
AC016550.1-201ENST00000505348 G3V3G9 751 aa14.8□□□□□ -0.04
AC016550.1-201ENST00000505348 RGL2O15211 777 aa14.75□□□□□ -0.05
AC016550.1-201ENST00000505348 ZNF710Q8N1W2 664 aa14.75□□□□□ -0.05
AC016550.1-201ENST00000505348 DOK7Q18PE1 504 aa14.74□□□□□ -0.05
AC016550.1-201ENST00000505348 RNF25Q96BH1 459 aaPredicted RBP14.72□□□□□ -0.05
AC016550.1-201ENST00000505348 ERBB3P21860 1342 aa14.71□□□□□ -0.05
AC016550.1-201ENST00000505348 RNF166Q96A37 237 aaPredicted RBP14.66□□□□□ -0.06
AC016550.1-201ENST00000505348 VARS2Q5ST30 1063 aaKnown RBP14.64□□□□□ -0.07
AC016550.1-201ENST00000505348 RIMBP2O15034 1052 aa14.63□□□□□ -0.07
AC016550.1-201ENST00000505348 EFCAB3Q8N7B9 438 aa14.63□□□□□ -0.07
AC016550.1-201ENST00000505348 TMEM92Q6UXU6 159 aa14.61□□□□□ -0.07
AC016550.1-201ENST00000505348 ZSWIM6Q9HCJ5 1215 aa14.59□□□□□ -0.07
AC016550.1-201ENST00000505348 RIOK3O14730 519 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms