RNA–Protein interactions for RNA: ENST00000505119.1

NEK1-202, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-202ENST00000505119 FAM212AQ96EL1 285 aa16.58■□□□□ 0.24
NEK1-202ENST00000505119 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
NEK1-202ENST00000505119 PHF12Q96QT6 1004 aa16.57■□□□□ 0.24
NEK1-202ENST00000505119 SPOCK2Q92563 424 aa16.52■□□□□ 0.24
NEK1-202ENST00000505119 DCAF8Q5TAQ9 597 aa16.44■□□□□ 0.22
NEK1-202ENST00000505119 GALR2O43603 387 aaPredicted RBP16.42■□□□□ 0.22
NEK1-202ENST00000505119 GSE1Q14687 1217 aa16.42■□□□□ 0.22
NEK1-202ENST00000505119 KIF12Q96FN5 646 aa16.42■□□□□ 0.22
NEK1-202ENST00000505119 MS4A3Q96HJ5 214 aa16.38■□□□□ 0.21
NEK1-202ENST00000505119 MAP3K13O43283 966 aa16.34■□□□□ 0.21
NEK1-202ENST00000505119 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
NEK1-202ENST00000505119 DCBLD2Q96PD2 775 aa16.31■□□□□ 0.2
NEK1-202ENST00000505119 PYGBP11216 843 aa16.29■□□□□ 0.2
NEK1-202ENST00000505119 CIZ1Q9ULV3 898 aaPredicted RBP16.29■□□□□ 0.2
NEK1-202ENST00000505119 PCDHB13Q9Y5F0 798 aa16.28■□□□□ 0.2
NEK1-202ENST00000505119 POTEIP0CG38 1075 aa16.25■□□□□ 0.19
NEK1-202ENST00000505119 CHRM1P11229 460 aaPredicted RBP16.21■□□□□ 0.19
NEK1-202ENST00000505119 IFNL1Q8IU54 200 aa16.19■□□□□ 0.18
NEK1-202ENST00000505119 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
NEK1-202ENST00000505119 TRPC6Q9Y210 931 aa16.16■□□□□ 0.18
NEK1-202ENST00000505119 TIE1P35590 1138 aa16.15■□□□□ 0.18
NEK1-202ENST00000505119 ASTLQ6HA08 431 aaPredicted RBP16.15■□□□□ 0.18
NEK1-202ENST00000505119 ZNF467Q7Z7K2 595 aaPredicted RBP16.13■□□□□ 0.17
NEK1-202ENST00000505119 ATMINO43313 823 aaPredicted RBP16.12■□□□□ 0.17
NEK1-202ENST00000505119 BMP2KQ9NSY1 1161 aaPredicted RBP16.12■□□□□ 0.17
NEK1-202ENST00000505119 PCDHB8Q9UN66 801 aa16.09■□□□□ 0.17
NEK1-202ENST00000505119 TTLL13PA6NNM8 815 aa16.06■□□□□ 0.16
NEK1-202ENST00000505119 ATN1P54259 1190 aaPredicted RBP16.04■□□□□ 0.16
NEK1-202ENST00000505119 PELP1Q8IZL8 1130 aaKnown RBP16.02■□□□□ 0.16
NEK1-202ENST00000505119 TMEM106CQ9BVX2 250 aa16.01■□□□□ 0.15
NEK1-202ENST00000505119 SLC39A7Q92504 469 aa15.98■□□□□ 0.15
NEK1-202ENST00000505119 PKD2Q13563 968 aa15.96■□□□□ 0.15
NEK1-202ENST00000505119 TRIM35Q9UPQ4 493 aa15.96■□□□□ 0.15
NEK1-202ENST00000505119 PDAP1Q13442 181 aaKnown RBP15.95■□□□□ 0.14
NEK1-202ENST00000505119 C7P10643 843 aa15.94■□□□□ 0.14
NEK1-202ENST00000505119 METRNQ9UJH8 293 aa15.93■□□□□ 0.14
NEK1-202ENST00000505119 ECM2O94769 699 aaPredicted RBP15.92■□□□□ 0.14
NEK1-202ENST00000505119 PSEN1P49768 467 aa15.92■□□□□ 0.14
NEK1-202ENST00000505119 RNF25Q96BH1 459 aaPredicted RBP15.92■□□□□ 0.14
NEK1-202ENST00000505119 RIOK3O14730 519 aaKnown RBP15.9■□□□□ 0.14
NEK1-202ENST00000505119 IER5LQ5T953 404 aa15.87■□□□□ 0.13
NEK1-202ENST00000505119 LHX8Q68G74 356 aa15.85■□□□□ 0.13
NEK1-202ENST00000505119 VGFO15240 615 aaPredicted RBP15.82■□□□□ 0.12
NEK1-202ENST00000505119 GOLGA2Q08379 1002 aa15.79■□□□□ 0.12
NEK1-202ENST00000505119 TAOK2Q9UL54 1235 aa15.79■□□□□ 0.12
NEK1-202ENST00000505119 RGL2O15211 777 aa15.77■□□□□ 0.12
NEK1-202ENST00000505119 SEC24BO95487 1268 aa15.77■□□□□ 0.12
NEK1-202ENST00000505119 POTEFA5A3E0 1075 aa15.75■□□□□ 0.11
NEK1-202ENST00000505119 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.74■□□□□ 0.11
NEK1-202ENST00000505119 ZFP91Q96JP5 570 aaPredicted RBP15.74■□□□□ 0.11
NEK1-202ENST00000505119 MKRN3Q13064 507 aaKnown RBP15.73■□□□□ 0.11
NEK1-202ENST00000505119 CABP2Q9NPB3 220 aa15.73■□□□□ 0.11
NEK1-202ENST00000505119 COLQQ9Y215 455 aaPredicted RBP15.73■□□□□ 0.11
NEK1-202ENST00000505119 POTEB2H3BUK9 544 aa15.72■□□□□ 0.11
NEK1-202ENST00000505119 IRX5P78411 483 aaPredicted RBP15.72■□□□□ 0.11
NEK1-202ENST00000505119 PLCG2P16885 1265 aa15.71■□□□□ 0.11
NEK1-202ENST00000505119 OCEL1Q9H607 264 aa15.66■□□□□ 0.1
NEK1-202ENST00000505119 BCL11BQ9C0K0 894 aaPredicted RBP15.62■□□□□ 0.09
NEK1-202ENST00000505119 STK25O00506 426 aa15.61■□□□□ 0.09
NEK1-202ENST00000505119 EFCAB3Q8N7B9 438 aa15.61■□□□□ 0.09
NEK1-202ENST00000505119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.61■□□□□ 0.092e-7■■□□□ 12
NEK1-202ENST00000505119 POTEJP0CG39 1038 aa15.6■□□□□ 0.09
NEK1-202ENST00000505119 ILDR1Q86SU0 546 aaPredicted RBP15.59■□□□□ 0.09
NEK1-202ENST00000505119 PDCD7Q8N8D1 485 aaKnown RBP15.59■□□□□ 0.09
NEK1-202ENST00000505119 MAMSTRQ6ZN01 415 aa15.58■□□□□ 0.08
NEK1-202ENST00000505119 STK24Q9Y6E0 443 aa15.58■□□□□ 0.08
NEK1-202ENST00000505119 OTUD5Q96G74 571 aa15.56■□□□□ 0.08
NEK1-202ENST00000505119 AMER1Q5JTC6 1135 aaPredicted RBP15.55■□□□□ 0.08
NEK1-202ENST00000505119 SCUBE2Q9NQ36 999 aa15.53■□□□□ 0.08
NEK1-202ENST00000505119 SOX12O15370 315 aa15.52■□□□□ 0.08
NEK1-202ENST00000505119 HS6ST3Q8IZP7 471 aa15.48■□□□□ 0.07
NEK1-202ENST00000505119 L3MBTL3Q96JM7 780 aaPredicted RBP15.46■□□□□ 0.07
NEK1-202ENST00000505119 RTN4Q9NQC3 1192 aaKnown RBP15.44■□□□□ 0.06
NEK1-202ENST00000505119 PHF8Q9UPP1 1060 aa15.44■□□□□ 0.06
NEK1-202ENST00000505119 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
NEK1-202ENST00000505119 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
NEK1-202ENST00000505119 NLRP6P59044 892 aa15.41■□□□□ 0.06
NEK1-202ENST00000505119 MFRPQ9BY79 579 aa15.39■□□□□ 0.05
NEK1-202ENST00000505119 MS4A4AQ96JQ5 239 aa15.38■□□□□ 0.05
NEK1-202ENST00000505119 FBXO22Q8NEZ5 403 aa15.37■□□□□ 0.05
NEK1-202ENST00000505119 BOLA1Q9Y3E2 137 aa15.37■□□□□ 0.05
NEK1-202ENST00000505119 G3V3G9 751 aa15.36■□□□□ 0.05
NEK1-202ENST00000505119 DCAF8L2P0C7V8 631 aa15.36■□□□□ 0.05
NEK1-202ENST00000505119 C3orf67Q6ZVT6 689 aa15.36■□□□□ 0.05
NEK1-202ENST00000505119 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.34■□□□□ 0.05
NEK1-202ENST00000505119 DNAJC5Q9H3Z4 198 aa15.33■□□□□ 0.04
NEK1-202ENST00000505119 SLAIN1Q8ND83 568 aa15.3■□□□□ 0.04
NEK1-202ENST00000505119 TMEM121BQ9BXQ6 578 aaPredicted RBP15.3■□□□□ 0.04
NEK1-202ENST00000505119 MICALL2Q8IY33 904 aa15.27■□□□□ 0.04
NEK1-202ENST00000505119 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
NEK1-202ENST00000505119 RYDENQ9NUL5 291 aaKnown RBP15.19■□□□□ 0.02
NEK1-202ENST00000505119 PPP1R37O75864 691 aa15.12■□□□□ 0.01
NEK1-202ENST00000505119 SNPHO15079 494 aa15.08■□□□□ 0
NEK1-202ENST00000505119 TMEM92Q6UXU6 159 aa15.07■□□□□ 0
NEK1-202ENST00000505119 GTPBP6O43824 516 aaPredicted RBP15.04■□□□□ -0
NEK1-202ENST00000505119 BBXQ8WY36 941 aaPredicted RBP15.04■□□□□ -0
NEK1-202ENST00000505119 FAM163AQ96GL9 167 aaPredicted RBP15.04■□□□□ -0
NEK1-202ENST00000505119 LCE2DQ5TA82 110 aaPredicted RBP15.01□□□□□ -0.01
NEK1-202ENST00000505119 KIF3CO14782 793 aa14.96□□□□□ -0.01
NEK1-202ENST00000505119 ST18O60284 1047 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms