RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 ADAMTS12P58397 1594 aa11.35□□□□□ -0.59
ATP2C1-208ENST00000504948 FKBP8Q14318 412 aa11.35□□□□□ -0.59
ATP2C1-208ENST00000504948 POLA1P09884 1462 aaPredicted RBP11.35□□□□□ -0.59
ATP2C1-208ENST00000504948 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
ATP2C1-208ENST00000504948 SYNJ1O43426 1573 aa11.34□□□□□ -0.59
ATP2C1-208ENST00000504948 CSRNP3Q8WYN3 585 aa11.34□□□□□ -0.59
ATP2C1-208ENST00000504948 IRX6P78412 446 aaPredicted RBP11.33□□□□□ -0.6
ATP2C1-208ENST00000504948 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
ATP2C1-208ENST00000504948 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
ATP2C1-208ENST00000504948 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
ATP2C1-208ENST00000504948 POLR3GLQ9BT43 218 aa11.3□□□□□ -0.6
ATP2C1-208ENST00000504948 ANP32EQ9BTT0 268 aa11.29□□□□□ -0.6
ATP2C1-208ENST00000504948 ERICH3Q5RHP9 1530 aa11.28□□□□□ -0.6
ATP2C1-208ENST00000504948 SENP3-EIF4A1A0A087X0R7 540 aa11.27□□□□□ -0.61
ATP2C1-208ENST00000504948 MAGI1Q96QZ7 1491 aaPredicted RBP11.26□□□□□ -0.61
ATP2C1-208ENST00000504948 CUL7Q14999 1698 aa11.26□□□□□ -0.61
ATP2C1-208ENST00000504948 TRIM52Q96A61 297 aa11.26□□□□□ -0.61
ATP2C1-208ENST00000504948 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
ATP2C1-208ENST00000504948 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
ATP2C1-208ENST00000504948 RUSC2Q8N2Y8 1516 aa11.24□□□□□ -0.61
ATP2C1-208ENST00000504948 DNAJC5Q9H3Z4 198 aa11.24□□□□□ -0.61
ATP2C1-208ENST00000504948 CCDC136Q96JN2 1154 aa11.22□□□□□ -0.61
ATP2C1-208ENST00000504948 FGD5Q6ZNL6 1462 aa11.21□□□□□ -0.61
ATP2C1-208ENST00000504948 HIRIP3Q9BW71 556 aaPredicted RBP11.21□□□□□ -0.62
ATP2C1-208ENST00000504948 NPM2Q86SE8 214 aaKnown RBP11.2□□□□□ -0.62
ATP2C1-208ENST00000504948 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
ATP2C1-208ENST00000504948 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.18□□□□□ -0.62
ATP2C1-208ENST00000504948 NUP160Q12769 1436 aa11.16□□□□□ -0.62
ATP2C1-208ENST00000504948 KIF13AQ9H1H9 1805 aa11.15□□□□□ -0.62
ATP2C1-208ENST00000504948 ARXQ96QS3 562 aa11.13□□□□□ -0.63
ATP2C1-208ENST00000504948 CTTNBP2Q8WZ74 1663 aa11.13□□□□□ -0.63
ATP2C1-208ENST00000504948 SUPT16HQ9Y5B9 1047 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-208ENST00000504948 CDK11AQ9UQ88 783 aaPredicted RBP11.12□□□□□ -0.63
ATP2C1-208ENST00000504948 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
ATP2C1-208ENST00000504948 ARHGEF11O15085 1522 aa11.1□□□□□ -0.63
ATP2C1-208ENST00000504948 GRIN2BQ13224 1484 aa11.09□□□□□ -0.63
ATP2C1-208ENST00000504948 DDX10Q13206 875 aaKnown RBP11.09□□□□□ -0.63
ATP2C1-208ENST00000504948 TSHZ2Q9NRE2 1034 aa11.07□□□□□ -0.64
ATP2C1-208ENST00000504948 DAXXQ9UER7 740 aaPredicted RBP11.06□□□□□ -0.64
ATP2C1-208ENST00000504948 PPRC1Q5VV67 1664 aaKnown RBP11.05□□□□□ -0.64
ATP2C1-208ENST00000504948 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
ATP2C1-208ENST00000504948 RAD54L2Q9Y4B4 1467 aa11.04□□□□□ -0.64
ATP2C1-208ENST00000504948 ARAP1Q96P48 1450 aa11.04□□□□□ -0.64
ATP2C1-208ENST00000504948 GRIN2AQ12879 1464 aa11.03□□□□□ -0.64
ATP2C1-208ENST00000504948 PRKCSHP14314 528 aaPredicted RBP11.02□□□□□ -0.65
ATP2C1-208ENST00000504948 GAPVD1Q14C86 1478 aa10.99□□□□□ -0.65
ATP2C1-208ENST00000504948 RBM19Q9Y4C8 960 aaKnown RBP10.99□□□□□ -0.65
ATP2C1-208ENST00000504948 SAMD9Q5K651 1589 aa10.98□□□□□ -0.65
ATP2C1-208ENST00000504948 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
ATP2C1-208ENST00000504948 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
ATP2C1-208ENST00000504948 MAPKBP1O60336 1514 aa10.98□□□□□ -0.65
ATP2C1-208ENST00000504948 ANO8Q9HCE9 1232 aaPredicted RBP10.98□□□□□ -0.65
ATP2C1-208ENST00000504948 DEKP35659 375 aaKnown RBP10.97□□□□□ -0.65
ATP2C1-208ENST00000504948 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
ATP2C1-208ENST00000504948 SOGA1O94964 1423 aa10.97□□□□□ -0.65
ATP2C1-208ENST00000504948 ADCY10Q96PN6 1610 aa10.97□□□□□ -0.65
ATP2C1-208ENST00000504948 ERCC6L2Q5T890 1561 aa10.96□□□□□ -0.66
ATP2C1-208ENST00000504948 UGGT2Q9NYU1 1516 aa10.95□□□□□ -0.66
ATP2C1-208ENST00000504948 WRNQ14191 1432 aaPredicted RBP eCLIP10.95□□□□□ -0.66
ATP2C1-208ENST00000504948 AQRO60306 1485 aaKnown RBP eCLIP10.94□□□□□ -0.662e-7■■■■■ 33.1
ATP2C1-208ENST00000504948 GLI2P10070 1586 aa10.94□□□□□ -0.66
ATP2C1-208ENST00000504948 FHAD1B1AJZ9 1412 aa10.94□□□□□ -0.66
ATP2C1-208ENST00000504948 ANP32CO43423 234 aa10.93□□□□□ -0.66
ATP2C1-208ENST00000504948 MAP3K4Q9Y6R4 1608 aa10.92□□□□□ -0.66
ATP2C1-208ENST00000504948 LAS1LQ9Y4W2 734 aaKnown RBP10.92□□□□□ -0.66
ATP2C1-208ENST00000504948 FAM9BQ8IZU0 186 aa10.91□□□□□ -0.66
ATP2C1-208ENST00000504948 CLSPNQ9HAW4 1339 aa10.91□□□□□ -0.66
ATP2C1-208ENST00000504948 ARID4BQ4LE39 1312 aaPredicted RBP10.91□□□□□ -0.66
ATP2C1-208ENST00000504948 FAM50AQ14320 339 aaKnown RBP10.9□□□□□ -0.66
ATP2C1-208ENST00000504948 UHRF1BP1LA0JNW5 1464 aa10.9□□□□□ -0.67
ATP2C1-208ENST00000504948 KDM5BQ9UGL1 1544 aa10.89□□□□□ -0.67
ATP2C1-208ENST00000504948 KIF21BO75037 1637 aa10.89□□□□□ -0.67
ATP2C1-208ENST00000504948 ANP32AP39687 249 aaKnown RBP10.88□□□□□ -0.67
ATP2C1-208ENST00000504948 DIP2BQ9P265 1576 aa10.87□□□□□ -0.67
ATP2C1-208ENST00000504948 LRRIQ1Q96JM4 1722 aa10.87□□□□□ -0.67
ATP2C1-208ENST00000504948 KIAA0556O60303 1618 aa10.87□□□□□ -0.67
ATP2C1-208ENST00000504948 B4GALNT3Q6L9W6 998 aa10.86□□□□□ -0.67
ATP2C1-208ENST00000504948 ZNF326Q5BKZ1 582 aaKnown RBP10.85□□□□□ -0.67
ATP2C1-208ENST00000504948 PRXQ9BXM0 1461 aa10.84□□□□□ -0.67
ATP2C1-208ENST00000504948 ABCA8O94911 1581 aa10.84□□□□□ -0.67
ATP2C1-208ENST00000504948 DISP1Q96F81 1524 aa10.83□□□□□ -0.68
ATP2C1-208ENST00000504948 IQGAP2Q13576 1575 aa10.83□□□□□ -0.68
ATP2C1-208ENST00000504948 ZBTB47Q9UFB7 747 aaPredicted RBP10.83□□□□□ -0.68
ATP2C1-208ENST00000504948 KIAA0586Q9BVV6 1533 aa10.82□□□□□ -0.68
ATP2C1-208ENST00000504948 ZCCHC11Q5TAX3 1644 aaKnown RBP10.78□□□□□ -0.68
ATP2C1-208ENST00000504948 CFAP43Q8NDM7 1665 aa10.77□□□□□ -0.68
ATP2C1-208ENST00000504948 TIMELESSQ9UNS1 1208 aa10.77□□□□□ -0.69
ATP2C1-208ENST00000504948 IGF1RP08069 1367 aa10.76□□□□□ -0.69
ATP2C1-208ENST00000504948 NEFMP07197 916 aa10.73□□□□□ -0.69
ATP2C1-208ENST00000504948 IL27Q8NEV9 243 aa10.72□□□□□ -0.69
ATP2C1-208ENST00000504948 ABCC2Q92887 1545 aa10.72□□□□□ -0.69
ATP2C1-208ENST00000504948 P3H3Q8IVL6 736 aa10.72□□□□□ -0.69
ATP2C1-208ENST00000504948 ARID3AQ99856 593 aa10.72□□□□□ -0.69
ATP2C1-208ENST00000504948 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
ATP2C1-208ENST00000504948 ABCA9Q8IUA7 1624 aa10.71□□□□□ -0.7
ATP2C1-208ENST00000504948 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
ATP2C1-208ENST00000504948 ARID3CA6NKF2 412 aa10.7□□□□□ -0.7
ATP2C1-208ENST00000504948 NOP58Q9Y2X3 529 aaKnown RBP10.7□□□□□ -0.7
ATP2C1-208ENST00000504948 OSCARQ8IYS5 282 aa10.68□□□□□ -0.7
ATP2C1-208ENST00000504948 SIN3AQ96ST3 1273 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms