RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.29
HMGCR-204ENST00000504466 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
HMGCR-204ENST00000504466 MS4A3Q96HJ5 214 aa13.18□□□□□ -0.3
HMGCR-204ENST00000504466 NUBP1P53384 320 aa13.16□□□□□ -0.3
HMGCR-204ENST00000504466 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
HMGCR-204ENST00000504466 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
HMGCR-204ENST00000504466 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
HMGCR-204ENST00000504466 MAP3K13O43283 966 aa13.06□□□□□ -0.32
HMGCR-204ENST00000504466 ATMINO43313 823 aaPredicted RBP13.06□□□□□ -0.32
HMGCR-204ENST00000504466 VASPP50552 380 aaPredicted RBP13.03□□□□□ -0.32
HMGCR-204ENST00000504466 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
HMGCR-204ENST00000504466 FAM212AQ96EL1 285 aa13□□□□□ -0.33
HMGCR-204ENST00000504466 TIE1P35590 1138 aa12.97□□□□□ -0.33
HMGCR-204ENST00000504466 SLC39A7Q92504 469 aa12.97□□□□□ -0.33
HMGCR-204ENST00000504466 TRPC6Q9Y210 931 aa12.97□□□□□ -0.33
HMGCR-204ENST00000504466 POTEB2H3BUK9 544 aa12.96□□□□□ -0.33
HMGCR-204ENST00000504466 C7P10643 843 aa12.96□□□□□ -0.33
HMGCR-204ENST00000504466 ATN1P54259 1190 aaPredicted RBP12.96□□□□□ -0.33
HMGCR-204ENST00000504466 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
HMGCR-204ENST00000504466 METRNQ9UJH8 293 aa12.93□□□□□ -0.34
HMGCR-204ENST00000504466 PCDHB13Q9Y5F0 798 aa12.92□□□□□ -0.34
HMGCR-204ENST00000504466 TTLL13PA6NNM8 815 aa12.88□□□□□ -0.35
HMGCR-204ENST00000504466 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
HMGCR-204ENST00000504466 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
HMGCR-204ENST00000504466 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
HMGCR-204ENST00000504466 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
HMGCR-204ENST00000504466 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
HMGCR-204ENST00000504466 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
HMGCR-204ENST00000504466 GSE1Q14687 1217 aa12.82□□□□□ -0.36
HMGCR-204ENST00000504466 IFNLR1Q8IU57 520 aaPredicted RBP12.82□□□□□ -0.36
HMGCR-204ENST00000504466 PYGBP11216 843 aa12.8□□□□□ -0.36
HMGCR-204ENST00000504466 IER5LQ5T953 404 aa12.78□□□□□ -0.36
HMGCR-204ENST00000504466 CHRM1P11229 460 aaPredicted RBP12.77□□□□□ -0.37
HMGCR-204ENST00000504466 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
HMGCR-204ENST00000504466 SPOCK2Q92563 424 aa12.75□□□□□ -0.37
HMGCR-204ENST00000504466 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
HMGCR-204ENST00000504466 MAMSTRQ6ZN01 415 aa12.73□□□□□ -0.37
HMGCR-204ENST00000504466 COLQQ9Y215 455 aaPredicted RBP12.73□□□□□ -0.37
HMGCR-204ENST00000504466 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.37
HMGCR-204ENST00000504466 ZNF467Q7Z7K2 595 aaPredicted RBP12.68□□□□□ -0.38
HMGCR-204ENST00000504466 SEC24BO95487 1268 aa12.67□□□□□ -0.38
HMGCR-204ENST00000504466 IRX5P78411 483 aaPredicted RBP12.63□□□□□ -0.39
HMGCR-204ENST00000504466 SCUBE2Q9NQ36 999 aa12.63□□□□□ -0.39
HMGCR-204ENST00000504466 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
HMGCR-204ENST00000504466 PLCG2P16885 1265 aa12.56□□□□□ -0.4
HMGCR-204ENST00000504466 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
HMGCR-204ENST00000504466 PSEN1P49768 467 aa12.55□□□□□ -0.4
HMGCR-204ENST00000504466 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
HMGCR-204ENST00000504466 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
HMGCR-204ENST00000504466 ILDR1Q86SU0 546 aaPredicted RBP12.47□□□□□ -0.41
HMGCR-204ENST00000504466 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
HMGCR-204ENST00000504466 LCE2DQ5TA82 110 aaPredicted RBP12.46□□□□□ -0.41
HMGCR-204ENST00000504466 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
HMGCR-204ENST00000504466 GOLGA2Q08379 1002 aa12.43□□□□□ -0.42
HMGCR-204ENST00000504466 POTEMA6NI47 508 aa12.42□□□□□ -0.42
HMGCR-204ENST00000504466 POTEGQ6S5H5 508 aa12.4□□□□□ -0.42
HMGCR-204ENST00000504466 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
HMGCR-204ENST00000504466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.432e-8■□□□□ 8.8
HMGCR-204ENST00000504466 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
HMGCR-204ENST00000504466 CABP2Q9NPB3 220 aa12.36□□□□□ -0.43
HMGCR-204ENST00000504466 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
HMGCR-204ENST00000504466 L3MBTL3Q96JM7 780 aaPredicted RBP12.35□□□□□ -0.43
HMGCR-204ENST00000504466 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
HMGCR-204ENST00000504466 RIOK3O14730 519 aaKnown RBP12.32□□□□□ -0.44
HMGCR-204ENST00000504466 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
HMGCR-204ENST00000504466 VGFO15240 615 aaPredicted RBP12.27□□□□□ -0.45
HMGCR-204ENST00000504466 DPY19L2Q6NUT2 758 aa12.27□□□□□ -0.45
HMGCR-204ENST00000504466 C3orf67Q6ZVT6 689 aa12.25□□□□□ -0.45
HMGCR-204ENST00000504466 EFCAB3Q8N7B9 438 aa12.25□□□□□ -0.45
HMGCR-204ENST00000504466 ST18O60284 1047 aa12.24□□□□□ -0.45
HMGCR-204ENST00000504466 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
HMGCR-204ENST00000504466 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
HMGCR-204ENST00000504466 SNPHO15079 494 aa12.22□□□□□ -0.45
HMGCR-204ENST00000504466 TMEM121BQ9BXQ6 578 aaPredicted RBP12.21□□□□□ -0.45
HMGCR-204ENST00000504466 BOLA1Q9Y3E2 137 aa12.21□□□□□ -0.45
HMGCR-204ENST00000504466 SOX12O15370 315 aa12.2□□□□□ -0.46
HMGCR-204ENST00000504466 PKD2Q13563 968 aa12.17□□□□□ -0.46
HMGCR-204ENST00000504466 TAOK2Q9UL54 1235 aa12.17□□□□□ -0.46
HMGCR-204ENST00000504466 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
HMGCR-204ENST00000504466 MS4A4AQ96JQ5 239 aa12.13□□□□□ -0.47
HMGCR-204ENST00000504466 G3V3G9 751 aa12.12□□□□□ -0.47
HMGCR-204ENST00000504466 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
HMGCR-204ENST00000504466 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
HMGCR-204ENST00000504466 PHF8Q9UPP1 1060 aa12.09□□□□□ -0.47
HMGCR-204ENST00000504466 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
HMGCR-204ENST00000504466 RGL2O15211 777 aa12.06□□□□□ -0.48
HMGCR-204ENST00000504466 CDAN1Q8IWY9 1227 aa12.06□□□□□ -0.48
HMGCR-204ENST00000504466 FBXO22Q8NEZ5 403 aa12.06□□□□□ -0.48
HMGCR-204ENST00000504466 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
HMGCR-204ENST00000504466 HOXB3P14651 431 aaPredicted RBP12.03□□□□□ -0.48
HMGCR-204ENST00000504466 NLRP6P59044 892 aa12.03□□□□□ -0.48
HMGCR-204ENST00000504466 STK25O00506 426 aa12.02□□□□□ -0.49
HMGCR-204ENST00000504466 TMEM92Q6UXU6 159 aa12.01□□□□□ -0.49
HMGCR-204ENST00000504466 MFRPQ9BY79 579 aa12.01□□□□□ -0.49
HMGCR-204ENST00000504466 MARVELD3Q96A59 401 aa12□□□□□ -0.49
HMGCR-204ENST00000504466 EMP3P54852 163 aa11.94□□□□□ -0.5
HMGCR-204ENST00000504466 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
HMGCR-204ENST00000504466 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
HMGCR-204ENST00000504466 POTEB3A0JP26 581 aa11.9□□□□□ -0.5
HMGCR-204ENST00000504466 POTEBQ6S5H4 581 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms