RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 CSRNP3Q8WYN3 585 aa10.05□□□□□ -0.8
COPB2-204ENST00000504295 TCOF1Q13428 1488 aaKnown RBP10.04□□□□□ -0.8
COPB2-204ENST00000504295 GRIN2BQ13224 1484 aa10.04□□□□□ -0.8
COPB2-204ENST00000504295 LRRC9Q6ZRR7 1453 aa10.03□□□□□ -0.8
COPB2-204ENST00000504295 E9PCH4 1651 aa10.02□□□□□ -0.81
COPB2-204ENST00000504295 PTPN23Q9H3S7 1636 aa10.01□□□□□ -0.81
COPB2-204ENST00000504295 UGGT2Q9NYU1 1516 aa10□□□□□ -0.81
COPB2-204ENST00000504295 ADAMTS12P58397 1594 aa10□□□□□ -0.81
COPB2-204ENST00000504295 ADGBQ8N7X0 1667 aa10□□□□□ -0.81
COPB2-204ENST00000504295 MAGI3Q5TCQ9 1506 aa10□□□□□ -0.81
COPB2-204ENST00000504295 TOPBP1Q92547 1522 aa9.99□□□□□ -0.81
COPB2-204ENST00000504295 AKNAQ7Z591 1439 aa9.98□□□□□ -0.81
COPB2-204ENST00000504295 IGF1RP08069 1367 aa9.96□□□□□ -0.81
COPB2-204ENST00000504295 SUPT6HQ7KZ85 1726 aaKnown RBP9.96□□□□□ -0.81
COPB2-204ENST00000504295 KIF27Q86VH2 1401 aa9.96□□□□□ -0.81
COPB2-204ENST00000504295 URB2Q14146 1524 aaKnown RBP9.95□□□□□ -0.82
COPB2-204ENST00000504295 POLA1P09884 1462 aaPredicted RBP9.95□□□□□ -0.82
COPB2-204ENST00000504295 CASKIN1Q8WXD9 1431 aa9.95□□□□□ -0.82
COPB2-204ENST00000504295 WDR62O43379 1518 aa9.94□□□□□ -0.82
COPB2-204ENST00000504295 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
COPB2-204ENST00000504295 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
COPB2-204ENST00000504295 CADPSQ9ULU8 1353 aa9.92□□□□□ -0.82
COPB2-204ENST00000504295 PDS5BQ9NTI5 1447 aa9.92□□□□□ -0.82
COPB2-204ENST00000504295 KDM6BO15054 1643 aa9.92□□□□□ -0.82
COPB2-204ENST00000504295 DNMT1P26358 1616 aaKnown RBP9.91□□□□□ -0.82
COPB2-204ENST00000504295 EHBP1L1Q8N3D4 1523 aa9.91□□□□□ -0.82
COPB2-204ENST00000504295 CDC42BPAQ5VT25 1732 aa9.91□□□□□ -0.82
COPB2-204ENST00000504295 NCOA2Q15596 1464 aa9.89□□□□□ -0.83
COPB2-204ENST00000504295 ERCC6Q03468 1493 aa9.89□□□□□ -0.83
COPB2-204ENST00000504295 MBD5Q9P267 1494 aa9.88□□□□□ -0.83
COPB2-204ENST00000504295 IQGAP2Q13576 1575 aa9.88□□□□□ -0.83
COPB2-204ENST00000504295 NESP48681 1621 aa9.87□□□□□ -0.83
COPB2-204ENST00000504295 KDM5DQ9BY66 1539 aa9.87□□□□□ -0.83
COPB2-204ENST00000504295 LAMC1P11047 1609 aa9.86□□□□□ -0.83
COPB2-204ENST00000504295 FANCD2Q9BXW9 1451 aa9.85□□□□□ -0.83
COPB2-204ENST00000504295 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
COPB2-204ENST00000504295 KIAA0556O60303 1618 aa9.83□□□□□ -0.84
COPB2-204ENST00000504295 ITSN2Q9NZM3 1697 aa9.82□□□□□ -0.84
COPB2-204ENST00000504295 HFM1A2PYH4 1435 aa9.82□□□□□ -0.84
COPB2-204ENST00000504295 PHLDB1Q86UU1 1377 aa9.82□□□□□ -0.84
COPB2-204ENST00000504295 SHROOM2Q13796 1616 aa9.81□□□□□ -0.84
COPB2-204ENST00000504295 PTPRKQ15262 1439 aa9.81□□□□□ -0.84
COPB2-204ENST00000504295 CEP170Q5SW79 1584 aa9.81□□□□□ -0.84
COPB2-204ENST00000504295 CCNB3Q8WWL7 1395 aa9.8□□□□□ -0.84
COPB2-204ENST00000504295 FHAD1B1AJZ9 1412 aa9.79□□□□□ -0.84
COPB2-204ENST00000504295 RNF17Q9BXT8 1623 aaKnown RBP9.78□□□□□ -0.84
COPB2-204ENST00000504295 KIF14Q15058 1648 aa9.77□□□□□ -0.84
COPB2-204ENST00000504295 ZNF316A6NFI3 1004 aaPredicted RBP9.77□□□□□ -0.84
COPB2-204ENST00000504295 CCDC18Q5T9S5 1454 aa9.77□□□□□ -0.85
COPB2-204ENST00000504295 TEX14Q8IWB6 1497 aa9.77□□□□□ -0.85
COPB2-204ENST00000504295 MRC2Q9UBG0 1479 aa9.77□□□□□ -0.85
COPB2-204ENST00000504295 ADGRL2O95490 1459 aa9.76□□□□□ -0.85
COPB2-204ENST00000504295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
COPB2-204ENST00000504295 MAST1Q9Y2H9 1570 aa9.75□□□□□ -0.85
COPB2-204ENST00000504295 BCORL1Q5H9F3 1711 aa9.75□□□□□ -0.85
COPB2-204ENST00000504295 MYO5CQ9NQX4 1742 aa9.75□□□□□ -0.85
COPB2-204ENST00000504295 DISP1Q96F81 1524 aa9.75□□□□□ -0.85
COPB2-204ENST00000504295 RAPGEF6Q8TEU7 1601 aa9.74□□□□□ -0.85
COPB2-204ENST00000504295 ABCA8O94911 1581 aa9.74□□□□□ -0.85
COPB2-204ENST00000504295 KDM5CP41229 1560 aa9.74□□□□□ -0.85
COPB2-204ENST00000504295 KANK4Q5T7N3 995 aaPredicted RBP9.74□□□□□ -0.85
COPB2-204ENST00000504295 EIF4G3O43432 1585 aaKnown RBP9.74□□□□□ -0.85
COPB2-204ENST00000504295 FGD6Q6ZV73 1430 aa9.74□□□□□ -0.85
COPB2-204ENST00000504295 UNC13BO14795 1591 aa9.73□□□□□ -0.85
COPB2-204ENST00000504295 NAIPQ13075 1403 aa9.73□□□□□ -0.85
COPB2-204ENST00000504295 GAPVD1Q14C86 1478 aa9.72□□□□□ -0.85
COPB2-204ENST00000504295 SETD5Q9C0A6 1442 aa9.71□□□□□ -0.85
COPB2-204ENST00000504295 RAB3GAP2Q9H2M9 1393 aa9.71□□□□□ -0.86
COPB2-204ENST00000504295 NEURL4Q96JN8 1562 aa9.71□□□□□ -0.86
COPB2-204ENST00000504295 SPATA31E1Q6ZUB1 1445 aa9.71□□□□□ -0.86
COPB2-204ENST00000504295 DIEXFQ68CQ4 756 aaKnown RBP9.71□□□□□ -0.86
COPB2-204ENST00000504295 IFT172Q9UG01 1749 aa9.71□□□□□ -0.86
COPB2-204ENST00000504295 CDC42BPBQ9Y5S2 1711 aa9.71□□□□□ -0.86
COPB2-204ENST00000504295 UACAQ9BZF9 1416 aa9.71□□□□□ -0.86
COPB2-204ENST00000504295 RAD54L2Q9Y4B4 1467 aa9.7□□□□□ -0.86
COPB2-204ENST00000504295 ARHGEF12Q9NZN5 1544 aa9.7□□□□□ -0.86
COPB2-204ENST00000504295 ARHGEF5Q12774 1597 aa9.7□□□□□ -0.86
COPB2-204ENST00000504295 CARMIL1Q5VZK9 1371 aa9.69□□□□□ -0.86
COPB2-204ENST00000504295 MAGI2Q86UL8 1455 aa9.68□□□□□ -0.86
COPB2-204ENST00000504295 FAM9AQ8IZU1 332 aaPredicted RBP9.68□□□□□ -0.86
COPB2-204ENST00000504295 DEPDC5O75140 1603 aa9.68□□□□□ -0.86
COPB2-204ENST00000504295 PREX2Q70Z35 1606 aa9.68□□□□□ -0.86
COPB2-204ENST00000504295 TRPM1Q7Z4N2 1603 aa9.68□□□□□ -0.86
COPB2-204ENST00000504295 VIRMAQ69YN4 1812 aaKnown RBP9.68□□□□□ -0.86
COPB2-204ENST00000504295 MYOM3Q5VTT5 1437 aa9.67□□□□□ -0.86
COPB2-204ENST00000504295 MIA2Q96PC5 1412 aa9.67□□□□□ -0.86
COPB2-204ENST00000504295 FMN1Q68DA7 1419 aa9.67□□□□□ -0.86
COPB2-204ENST00000504295 SHANK2Q9UPX8 1470 aa9.66□□□□□ -0.86
COPB2-204ENST00000504295 TIMELESSQ9UNS1 1208 aa9.66□□□□□ -0.86
COPB2-204ENST00000504295 PLXNC1O60486 1568 aa9.66□□□□□ -0.86
COPB2-204ENST00000504295 EPRSP07814 1512 aaKnown RBP9.65□□□□□ -0.86
COPB2-204ENST00000504295 ZMYM4Q5VZL5 1548 aa9.64□□□□□ -0.87
COPB2-204ENST00000504295 PPP1R15AO75807 674 aaPredicted RBP9.64□□□□□ -0.87
COPB2-204ENST00000504295 PTPRGP23470 1445 aa9.63□□□□□ -0.87
COPB2-204ENST00000504295 ROCK1Q13464 1354 aa9.63□□□□□ -0.87
COPB2-204ENST00000504295 ZC3H13Q5T200 1668 aaKnown RBP9.63□□□□□ -0.87
COPB2-204ENST00000504295 IQGAP1P46940 1657 aa9.63□□□□□ -0.87
COPB2-204ENST00000504295 ABCC10Q5T3U5 1492 aa9.63□□□□□ -0.87
COPB2-204ENST00000504295 MYOM1P52179 1685 aa9.62□□□□□ -0.87
COPB2-204ENST00000504295 IQGAP3Q86VI3 1631 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms