RNA–Protein interactions for RNA: ENST00000502969.1

SRPK1-206, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-206ENST00000502969 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
SRPK1-206ENST00000502969 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
SRPK1-206ENST00000502969 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
SRPK1-206ENST00000502969 HAX1O00165 279 aa11.77□□□□□ -0.53
SRPK1-206ENST00000502969 RGL2O15211 777 aa11.76□□□□□ -0.53
SRPK1-206ENST00000502969 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
SRPK1-206ENST00000502969 CHRM1P11229 460 aaPredicted RBP11.72□□□□□ -0.53
SRPK1-206ENST00000502969 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
SRPK1-206ENST00000502969 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
SRPK1-206ENST00000502969 PYGBP11216 843 aa11.68□□□□□ -0.54
SRPK1-206ENST00000502969 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.67□□□□□ -0.54
SRPK1-206ENST00000502969 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
SRPK1-206ENST00000502969 VGFO15240 615 aaPredicted RBP11.62□□□□□ -0.55
SRPK1-206ENST00000502969 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
SRPK1-206ENST00000502969 ZNF467Q7Z7K2 595 aaPredicted RBP11.62□□□□□ -0.55
SRPK1-206ENST00000502969 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
SRPK1-206ENST00000502969 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
SRPK1-206ENST00000502969 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
SRPK1-206ENST00000502969 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
SRPK1-206ENST00000502969 HS6ST3Q8IZP7 471 aa11.58□□□□□ -0.56
SRPK1-206ENST00000502969 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
SRPK1-206ENST00000502969 STK25O00506 426 aa11.55□□□□□ -0.56
SRPK1-206ENST00000502969 SGIP1Q9BQI5 828 aa11.53□□□□□ -0.56
SRPK1-206ENST00000502969 PCDHB13Q9Y5F0 798 aa11.53□□□□□ -0.56
SRPK1-206ENST00000502969 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.57
SRPK1-206ENST00000502969 EVX2Q03828 476 aa11.51□□□□□ -0.57
SRPK1-206ENST00000502969 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
SRPK1-206ENST00000502969 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
SRPK1-206ENST00000502969 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
SRPK1-206ENST00000502969 KIF12Q96FN5 646 aa11.48□□□□□ -0.57
SRPK1-206ENST00000502969 ZFP91Q96JP5 570 aaPredicted RBP11.48□□□□□ -0.57
SRPK1-206ENST00000502969 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
SRPK1-206ENST00000502969 PAXIP1Q6ZW49 1069 aaPredicted RBP11.47□□□□□ -0.57
SRPK1-206ENST00000502969 SPRYD3Q8NCJ5 442 aa11.47□□□□□ -0.57
SRPK1-206ENST00000502969 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
SRPK1-206ENST00000502969 PCDHB8Q9UN66 801 aa11.47□□□□□ -0.57
SRPK1-206ENST00000502969 MAP3K13O43283 966 aa11.46□□□□□ -0.57
SRPK1-206ENST00000502969 CFAP44Q96MT7 982 aa11.46□□□□□ -0.57
SRPK1-206ENST00000502969 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
SRPK1-206ENST00000502969 PHF12Q96QT6 1004 aa11.44□□□□□ -0.58
SRPK1-206ENST00000502969 RYDENQ9NUL5 291 aaKnown RBP11.44□□□□□ -0.58
SRPK1-206ENST00000502969 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
SRPK1-206ENST00000502969 PSEN1P49768 467 aa11.42□□□□□ -0.58
SRPK1-206ENST00000502969 IFNL1Q8IU54 200 aa11.42□□□□□ -0.58
SRPK1-206ENST00000502969 CLCN6P51797 869 aa11.39□□□□□ -0.59
SRPK1-206ENST00000502969 GOLGA2Q08379 1002 aa11.34□□□□□ -0.59
SRPK1-206ENST00000502969 MS4A3Q96HJ5 214 aa11.33□□□□□ -0.6
SRPK1-206ENST00000502969 GABBR2O75899 941 aa11.31□□□□□ -0.6
SRPK1-206ENST00000502969 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
SRPK1-206ENST00000502969 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
SRPK1-206ENST00000502969 TMEM106CQ9BVX2 250 aa11.28□□□□□ -0.6
SRPK1-206ENST00000502969 GTPBP6O43824 516 aaPredicted RBP11.26□□□□□ -0.61
SRPK1-206ENST00000502969 VSIG10Q8N0Z9 540 aa11.26□□□□□ -0.61
SRPK1-206ENST00000502969 TIE1P35590 1138 aa11.25□□□□□ -0.61
SRPK1-206ENST00000502969 SOX12O15370 315 aa11.24□□□□□ -0.61
SRPK1-206ENST00000502969 NLRP6P59044 892 aa11.22□□□□□ -0.61
SRPK1-206ENST00000502969 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
SRPK1-206ENST00000502969 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.61
SRPK1-206ENST00000502969 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
SRPK1-206ENST00000502969 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
SRPK1-206ENST00000502969 TTLL13PA6NNM8 815 aa11.17□□□□□ -0.62
SRPK1-206ENST00000502969 MFRPQ9BY79 579 aa11.17□□□□□ -0.62
SRPK1-206ENST00000502969 TRPC6Q9Y210 931 aa11.17□□□□□ -0.62
SRPK1-206ENST00000502969 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
SRPK1-206ENST00000502969 PHF8Q9UPP1 1060 aa11.13□□□□□ -0.63
SRPK1-206ENST00000502969 TRIM35Q9UPQ4 493 aa11.12□□□□□ -0.63
SRPK1-206ENST00000502969 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
SRPK1-206ENST00000502969 FBXO22Q8NEZ5 403 aa11.09□□□□□ -0.63
SRPK1-206ENST00000502969 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.08□□□□□ -0.644e-11■■■■■ 44.8
SRPK1-206ENST00000502969 LHX8Q68G74 356 aa11.07□□□□□ -0.64
SRPK1-206ENST00000502969 ATMINO43313 823 aaPredicted RBP11.06□□□□□ -0.64
SRPK1-206ENST00000502969 ASTLQ6HA08 431 aaPredicted RBP11.06□□□□□ -0.64
SRPK1-206ENST00000502969 IER5LQ5T953 404 aa11.05□□□□□ -0.64
SRPK1-206ENST00000502969 ATN1P54259 1190 aaPredicted RBP11.04□□□□□ -0.64
SRPK1-206ENST00000502969 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
SRPK1-206ENST00000502969 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
SRPK1-206ENST00000502969 WDR70Q9NW82 654 aa11.02□□□□□ -0.65
SRPK1-206ENST00000502969 G3V3G9 751 aa11.01□□□□□ -0.65
SRPK1-206ENST00000502969 PPP1R37O75864 691 aa10.99□□□□□ -0.65
SRPK1-206ENST00000502969 PLCG2P16885 1265 aa10.99□□□□□ -0.65
SRPK1-206ENST00000502969 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
SRPK1-206ENST00000502969 BCANQ96GW7 911 aa10.98□□□□□ -0.65
SRPK1-206ENST00000502969 SEC24BO95487 1268 aa10.97□□□□□ -0.65
SRPK1-206ENST00000502969 OCEL1Q9H607 264 aa10.97□□□□□ -0.65
SRPK1-206ENST00000502969 SLC39A7Q92504 469 aa10.96□□□□□ -0.65
SRPK1-206ENST00000502969 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
SRPK1-206ENST00000502969 P3H3Q8IVL6 736 aa10.93□□□□□ -0.66
SRPK1-206ENST00000502969 IRX5P78411 483 aaPredicted RBP10.92□□□□□ -0.66
SRPK1-206ENST00000502969 C7P10643 843 aa10.91□□□□□ -0.66
SRPK1-206ENST00000502969 CADPS2Q86UW7 1296 aa10.91□□□□□ -0.66
SRPK1-206ENST00000502969 PDE4AP27815 886 aa10.9□□□□□ -0.66
SRPK1-206ENST00000502969 NBR1Q14596 966 aa10.9□□□□□ -0.66
SRPK1-206ENST00000502969 PDCD7Q8N8D1 485 aaKnown RBP10.9□□□□□ -0.66
SRPK1-206ENST00000502969 L3MBTL3Q96JM7 780 aaPredicted RBP10.9□□□□□ -0.66
SRPK1-206ENST00000502969 METRNQ9UJH8 293 aa10.87□□□□□ -0.67
SRPK1-206ENST00000502969 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
SRPK1-206ENST00000502969 DPY19L2Q6NUT2 758 aa10.86□□□□□ -0.67
SRPK1-206ENST00000502969 MICALL2Q8IY33 904 aa10.86□□□□□ -0.67
SRPK1-206ENST00000502969 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
SRPK1-206ENST00000502969 LARP6Q9BRS8 491 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms