RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 THOC2Q8NI27 1593 aaKnown RBP10.76□□□□□ -0.69
LYSMD3-203ENST00000500869 CCNB3Q8WWL7 1395 aa10.76□□□□□ -0.69
LYSMD3-203ENST00000500869 FHAD1B1AJZ9 1412 aa10.76□□□□□ -0.69
LYSMD3-203ENST00000500869 SAMD9Q5K651 1589 aa10.76□□□□□ -0.69
LYSMD3-203ENST00000500869 TOPBP1Q92547 1522 aa10.75□□□□□ -0.69
LYSMD3-203ENST00000500869 CENPBP07199 599 aaPredicted RBP10.75□□□□□ -0.69
LYSMD3-203ENST00000500869 NEUROD1Q13562 356 aa10.74□□□□□ -0.69
LYSMD3-203ENST00000500869 CARMIL1Q5VZK9 1371 aa10.74□□□□□ -0.69
LYSMD3-203ENST00000500869 MAPKBP1O60336 1514 aa10.74□□□□□ -0.69
LYSMD3-203ENST00000500869 POLA1P09884 1462 aaPredicted RBP10.73□□□□□ -0.69
LYSMD3-203ENST00000500869 KANK4Q5T7N3 995 aaPredicted RBP10.72□□□□□ -0.69
LYSMD3-203ENST00000500869 CASKIN1Q8WXD9 1431 aa10.71□□□□□ -0.7
LYSMD3-203ENST00000500869 TTBK1Q5TCY1 1321 aaPredicted RBP10.7□□□□□ -0.7
LYSMD3-203ENST00000500869 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
LYSMD3-203ENST00000500869 SNAPC4Q5SXM2 1469 aa10.69□□□□□ -0.7
LYSMD3-203ENST00000500869 LRRIQ1Q96JM4 1722 aa10.69□□□□□ -0.7
LYSMD3-203ENST00000500869 URB2Q14146 1524 aaKnown RBP10.65□□□□□ -0.7
LYSMD3-203ENST00000500869 ARHGEF11O15085 1522 aa10.65□□□□□ -0.7
LYSMD3-203ENST00000500869 TARBP1Q13395 1621 aaKnown RBP10.64□□□□□ -0.71
LYSMD3-203ENST00000500869 SETD5Q9C0A6 1442 aa10.64□□□□□ -0.71
LYSMD3-203ENST00000500869 PHLDB1Q86UU1 1377 aa10.63□□□□□ -0.71
LYSMD3-203ENST00000500869 GRIN2BQ13224 1484 aa10.62□□□□□ -0.71
LYSMD3-203ENST00000500869 FMN1Q68DA7 1419 aa10.62□□□□□ -0.71
LYSMD3-203ENST00000500869 RAB3GAP2Q9H2M9 1393 aa10.62□□□□□ -0.71
LYSMD3-203ENST00000500869 RAD54L2Q9Y4B4 1467 aa10.62□□□□□ -0.71
LYSMD3-203ENST00000500869 PBRM1Q86U86 1689 aa10.61□□□□□ -0.71
LYSMD3-203ENST00000500869 EHBP1L1Q8N3D4 1523 aa10.6□□□□□ -0.71
LYSMD3-203ENST00000500869 MIER1Q8N108 512 aa10.6□□□□□ -0.71
LYSMD3-203ENST00000500869 TIMELESSQ9UNS1 1208 aa10.59□□□□□ -0.71
LYSMD3-203ENST00000500869 GTF3C3Q9Y5Q9 886 aa10.59□□□□□ -0.71
LYSMD3-203ENST00000500869 GCC2Q8IWJ2 1684 aa10.59□□□□□ -0.71
LYSMD3-203ENST00000500869 SUPT6HQ7KZ85 1726 aaKnown RBP10.59□□□□□ -0.71
LYSMD3-203ENST00000500869 NESP48681 1621 aa10.57□□□□□ -0.72
LYSMD3-203ENST00000500869 PTPN23Q9H3S7 1636 aa10.57□□□□□ -0.72
LYSMD3-203ENST00000500869 TCOF1Q13428 1488 aaKnown RBP10.57□□□□□ -0.72
LYSMD3-203ENST00000500869 UGGT2Q9NYU1 1516 aa10.57□□□□□ -0.72
LYSMD3-203ENST00000500869 FHOD3Q2V2M9 1422 aa10.56□□□□□ -0.72
LYSMD3-203ENST00000500869 ADAMTS12P58397 1594 aa10.56□□□□□ -0.72
LYSMD3-203ENST00000500869 FGD6Q6ZV73 1430 aa10.56□□□□□ -0.72
LYSMD3-203ENST00000500869 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
LYSMD3-203ENST00000500869 AKNAQ7Z591 1439 aa10.55□□□□□ -0.72
LYSMD3-203ENST00000500869 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
LYSMD3-203ENST00000500869 HECW1Q76N89 1606 aa10.55□□□□□ -0.72
LYSMD3-203ENST00000500869 HFM1A2PYH4 1435 aa10.54□□□□□ -0.72
LYSMD3-203ENST00000500869 PDS5BQ9NTI5 1447 aa10.54□□□□□ -0.72
LYSMD3-203ENST00000500869 KDM5BQ9UGL1 1544 aa10.51□□□□□ -0.73
LYSMD3-203ENST00000500869 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
LYSMD3-203ENST00000500869 UACAQ9BZF9 1416 aa10.5□□□□□ -0.73
LYSMD3-203ENST00000500869 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
LYSMD3-203ENST00000500869 NCOA2Q15596 1464 aa10.5□□□□□ -0.73
LYSMD3-203ENST00000500869 WDR62O43379 1518 aa10.49□□□□□ -0.73
LYSMD3-203ENST00000500869 RANGAP1P46060 587 aaPredicted RBP10.49□□□□□ -0.73
LYSMD3-203ENST00000500869 MAGI3Q5TCQ9 1506 aa10.49□□□□□ -0.73
LYSMD3-203ENST00000500869 NAIPQ13075 1403 aa10.46□□□□□ -0.74
LYSMD3-203ENST00000500869 PTPRKQ15262 1439 aa10.46□□□□□ -0.74
LYSMD3-203ENST00000500869 MIA2Q96PC5 1412 aa10.45□□□□□ -0.74
LYSMD3-203ENST00000500869 MRC2Q9UBG0 1479 aa10.45□□□□□ -0.74
LYSMD3-203ENST00000500869 ADCY10Q96PN6 1610 aa10.43□□□□□ -0.74
LYSMD3-203ENST00000500869 POLR1AO95602 1720 aaPredicted RBP10.43□□□□□ -0.74
LYSMD3-203ENST00000500869 KIAA0556O60303 1618 aa10.42□□□□□ -0.74
LYSMD3-203ENST00000500869 EPRSP07814 1512 aaKnown RBP10.42□□□□□ -0.74
LYSMD3-203ENST00000500869 DENND4BO75064 1496 aaPredicted RBP10.41□□□□□ -0.74
LYSMD3-203ENST00000500869 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
LYSMD3-203ENST00000500869 IFT140Q96RY7 1462 aa10.4□□□□□ -0.74
LYSMD3-203ENST00000500869 MTUS2Q5JR59 1369 aa10.4□□□□□ -0.74
LYSMD3-203ENST00000500869 PPP1R15AO75807 674 aaPredicted RBP10.4□□□□□ -0.74
LYSMD3-203ENST00000500869 CROCC2H7BZ55 1655 aa10.39□□□□□ -0.75
LYSMD3-203ENST00000500869 ADGBQ8N7X0 1667 aa10.38□□□□□ -0.75
LYSMD3-203ENST00000500869 TDRD9Q8NDG6 1382 aaKnown RBP10.38□□□□□ -0.75
LYSMD3-203ENST00000500869 ROCK1Q13464 1354 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 RAPGEF6Q8TEU7 1601 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 MYT1Q01538 1121 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 ITSN2Q9NZM3 1697 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 DISP1Q96F81 1524 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 KIAA0586Q9BVV6 1533 aa10.37□□□□□ -0.75
LYSMD3-203ENST00000500869 CCER2I3L3R5 266 aa10.36□□□□□ -0.75
LYSMD3-203ENST00000500869 KDM6BO15054 1643 aa10.36□□□□□ -0.75
LYSMD3-203ENST00000500869 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
LYSMD3-203ENST00000500869 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
LYSMD3-203ENST00000500869 FAM50AQ14320 339 aaKnown RBP10.34□□□□□ -0.75
LYSMD3-203ENST00000500869 CDK13Q14004 1512 aaKnown RBP10.32□□□□□ -0.76
LYSMD3-203ENST00000500869 SUPT16HQ9Y5B9 1047 aaKnown RBP10.32□□□□□ -0.76
LYSMD3-203ENST00000500869 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
LYSMD3-203ENST00000500869 NUP153P49790 1475 aaKnown RBP10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 MAGI1Q96QZ7 1491 aaPredicted RBP10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 GRIN2AQ12879 1464 aa10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 P3H3Q8IVL6 736 aa10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 SIN3AQ96ST3 1273 aa10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 ITGAEP38570 1179 aa10.31□□□□□ -0.76
LYSMD3-203ENST00000500869 TEX14Q8IWB6 1497 aa10.3□□□□□ -0.76
LYSMD3-203ENST00000500869 DAPK1P53355 1430 aa10.3□□□□□ -0.76
LYSMD3-203ENST00000500869 TONSLQ96HA7 1378 aa10.29□□□□□ -0.76
LYSMD3-203ENST00000500869 RPRD2Q5VT52 1461 aaKnown RBP10.28□□□□□ -0.76
LYSMD3-203ENST00000500869 CEP170Q5SW79 1584 aa10.28□□□□□ -0.76
LYSMD3-203ENST00000500869 MBD5Q9P267 1494 aa10.28□□□□□ -0.76
LYSMD3-203ENST00000500869 KDM5DQ9BY66 1539 aa10.27□□□□□ -0.77
LYSMD3-203ENST00000500869 ABCC5O15440 1437 aa10.26□□□□□ -0.77
LYSMD3-203ENST00000500869 SHANK2Q9UPX8 1470 aa10.26□□□□□ -0.77
LYSMD3-203ENST00000500869 ZNF608Q9ULD9 1512 aaPredicted RBP10.26□□□□□ -0.77
LYSMD3-203ENST00000500869 NUP160Q12769 1436 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms