RNA–Protein interactions for RNA: ENST00000498268.1

USP34-222, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 497 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-222ENST00000498268 NUBP1P53384 320 aa13.3□□□□□ -0.28
USP34-222ENST00000498268 LHX8Q68G74 356 aa13.3□□□□□ -0.28
USP34-222ENST00000498268 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
USP34-222ENST00000498268 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
USP34-222ENST00000498268 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
USP34-222ENST00000498268 MAP3K13O43283 966 aa13.22□□□□□ -0.29
USP34-222ENST00000498268 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.29
USP34-222ENST00000498268 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
USP34-222ENST00000498268 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
USP34-222ENST00000498268 ATMINO43313 823 aaPredicted RBP13.17□□□□□ -0.3
USP34-222ENST00000498268 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
USP34-222ENST00000498268 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
USP34-222ENST00000498268 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
USP34-222ENST00000498268 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
USP34-222ENST00000498268 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
USP34-222ENST00000498268 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
USP34-222ENST00000498268 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
USP34-222ENST00000498268 PCDHB13Q9Y5F0 798 aa13.06□□□□□ -0.32
USP34-222ENST00000498268 IFNL1Q8IU54 200 aa13.04□□□□□ -0.32
USP34-222ENST00000498268 IFNLR1Q8IU57 520 aaPredicted RBP13.04□□□□□ -0.32
USP34-222ENST00000498268 PYGBP11216 843 aa13.02□□□□□ -0.33
USP34-222ENST00000498268 METRNQ9UJH8 293 aa13.02□□□□□ -0.33
USP34-222ENST00000498268 TIE1P35590 1138 aa13.01□□□□□ -0.33
USP34-222ENST00000498268 SGIP1Q9BQI5 828 aa13.01□□□□□ -0.33
USP34-222ENST00000498268 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
USP34-222ENST00000498268 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
USP34-222ENST00000498268 C7P10643 843 aa12.99□□□□□ -0.33
USP34-222ENST00000498268 SLC39A7Q92504 469 aa12.99□□□□□ -0.33
USP34-222ENST00000498268 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
USP34-222ENST00000498268 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
USP34-222ENST00000498268 PCDHB8Q9UN66 801 aa12.93□□□□□ -0.34
USP34-222ENST00000498268 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
USP34-222ENST00000498268 GSE1Q14687 1217 aa12.89□□□□□ -0.35
USP34-222ENST00000498268 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
USP34-222ENST00000498268 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
USP34-222ENST00000498268 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
USP34-222ENST00000498268 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
USP34-222ENST00000498268 CIZ1Q9ULV3 898 aaPredicted RBP12.81□□□□□ -0.36
USP34-222ENST00000498268 SEC24BO95487 1268 aa12.78□□□□□ -0.36
USP34-222ENST00000498268 IER5LQ5T953 404 aa12.77□□□□□ -0.37
USP34-222ENST00000498268 ZNF467Q7Z7K2 595 aaPredicted RBP12.73□□□□□ -0.37
USP34-222ENST00000498268 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
USP34-222ENST00000498268 MAMSTRQ6ZN01 415 aa12.7□□□□□ -0.38
USP34-222ENST00000498268 PSEN1P49768 467 aa12.68□□□□□ -0.38
USP34-222ENST00000498268 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
USP34-222ENST00000498268 PLCG2P16885 1265 aa12.65□□□□□ -0.38
USP34-222ENST00000498268 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
USP34-222ENST00000498268 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
USP34-222ENST00000498268 LCE2DQ5TA82 110 aaPredicted RBP12.58□□□□□ -0.4
USP34-222ENST00000498268 PDCD7Q8N8D1 485 aaKnown RBP12.57□□□□□ -0.4
USP34-222ENST00000498268 MKRN3Q13064 507 aaKnown RBP12.55□□□□□ -0.4
USP34-222ENST00000498268 RNF25Q96BH1 459 aaPredicted RBP12.55□□□□□ -0.4
USP34-222ENST00000498268 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
USP34-222ENST00000498268 FAM163AQ96GL9 167 aaPredicted RBP12.54□□□□□ -0.4
USP34-222ENST00000498268 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
USP34-222ENST00000498268 TRIM41Q8WV44 630 aa12.52□□□□□ -0.41
USP34-222ENST00000498268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.416e-12■□□□□ 9.5
USP34-222ENST00000498268 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
USP34-222ENST00000498268 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
USP34-222ENST00000498268 POTEMA6NI47 508 aa12.5□□□□□ -0.41
USP34-222ENST00000498268 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
USP34-222ENST00000498268 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
USP34-222ENST00000498268 RIOK3O14730 519 aaKnown RBP12.44□□□□□ -0.42
USP34-222ENST00000498268 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
USP34-222ENST00000498268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.41□□□□□ -0.42
USP34-222ENST00000498268 ZFP91Q96JP5 570 aaPredicted RBP12.41□□□□□ -0.42
USP34-222ENST00000498268 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
USP34-222ENST00000498268 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
USP34-222ENST00000498268 PKD2Q13563 968 aa12.38□□□□□ -0.43
USP34-222ENST00000498268 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
USP34-222ENST00000498268 ST18O60284 1047 aa12.35□□□□□ -0.43
USP34-222ENST00000498268 ECM2O94769 699 aaPredicted RBP12.33□□□□□ -0.44
USP34-222ENST00000498268 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
USP34-222ENST00000498268 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
USP34-222ENST00000498268 RGL2O15211 777 aa12.3□□□□□ -0.44
USP34-222ENST00000498268 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
USP34-222ENST00000498268 PHF8Q9UPP1 1060 aa12.28□□□□□ -0.44
USP34-222ENST00000498268 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
USP34-222ENST00000498268 PLSCR2Q9NRY7 297 aa12.27□□□□□ -0.45
USP34-222ENST00000498268 SOX12O15370 315 aa12.26□□□□□ -0.45
USP34-222ENST00000498268 TMEM121BQ9BXQ6 578 aaPredicted RBP12.26□□□□□ -0.45
USP34-222ENST00000498268 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
USP34-222ENST00000498268 G3V3G9 751 aa12.2□□□□□ -0.46
USP34-222ENST00000498268 SNPHO15079 494 aa12.2□□□□□ -0.46
USP34-222ENST00000498268 STK25O00506 426 aa12.19□□□□□ -0.46
USP34-222ENST00000498268 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
USP34-222ENST00000498268 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
USP34-222ENST00000498268 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
USP34-222ENST00000498268 FBXO22Q8NEZ5 403 aa12.18□□□□□ -0.46
USP34-222ENST00000498268 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
USP34-222ENST00000498268 MFRPQ9BY79 579 aa12.17□□□□□ -0.46
USP34-222ENST00000498268 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
USP34-222ENST00000498268 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
USP34-222ENST00000498268 HOXB3P14651 431 aaPredicted RBP12.15□□□□□ -0.46
USP34-222ENST00000498268 NLRP6P59044 892 aa12.13□□□□□ -0.47
USP34-222ENST00000498268 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
USP34-222ENST00000498268 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
USP34-222ENST00000498268 EMP3P54852 163 aa12.03□□□□□ -0.48
USP34-222ENST00000498268 PPP1R37O75864 691 aa12.02□□□□□ -0.49
USP34-222ENST00000498268 FAM205CA6NFA0 338 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms