RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 RSF1Q96T23 1441 aaPredicted RBP2.6□□□□□ -1.99
XRN1-214ENST00000498077 ZNF692Q9BU19 519 aaPredicted RBP2.6□□□□□ -1.99
XRN1-214ENST00000498077 SPINK5Q9NQ38 1064 aaPredicted RBP2.59□□□□□ -1.99
XRN1-214ENST00000498077 SLC4A2P04920 1241 aa2.59□□□□□ -2
XRN1-214ENST00000498077 EIF4G1Q04637 1599 aaKnown RBP2.58□□□□□ -2
XRN1-214ENST00000498077 LTBP4Q8N2S1 1624 aa2.58□□□□□ -2
XRN1-214ENST00000498077 PRR29P0C7W0 189 aa2.57□□□□□ -2
XRN1-214ENST00000498077 KDM4FA0A1W2PPD8 638 aa2.57□□□□□ -2
XRN1-214ENST00000498077 CERKQ8TCT0 537 aa2.57□□□□□ -2
XRN1-214ENST00000498077 FBXO3Q9UK99 471 aa2.55□□□□□ -2
XRN1-214ENST00000498077 CLEC11AQ9Y240 323 aa2.55□□□□□ -2
XRN1-214ENST00000498077 TAOK2Q9UL54 1235 aa2.55□□□□□ -2
XRN1-214ENST00000498077 CHRDL2Q6WN34 429 aa2.54□□□□□ -2
XRN1-214ENST00000498077 ARAP1Q96P48 1450 aa2.53□□□□□ -2
XRN1-214ENST00000498077 ADGRL1O94910 1474 aa2.53□□□□□ -2
XRN1-214ENST00000498077 REM2Q8IYK8 340 aaPredicted RBP2.53□□□□□ -2
XRN1-214ENST00000498077 RANGAP1P46060 587 aaPredicted RBP2.52□□□□□ -2.01
XRN1-214ENST00000498077 MED1Q15648 1581 aaPredicted RBP2.52□□□□□ -2.01
XRN1-214ENST00000498077 HAX1O00165 279 aa2.51□□□□□ -2.01
XRN1-214ENST00000498077 UNC13AQ9UPW8 1703 aa2.51□□□□□ -2.01
XRN1-214ENST00000498077 G3V3G9 751 aa2.5□□□□□ -2.01
XRN1-214ENST00000498077 DCAF8Q5TAQ9 597 aa2.5□□□□□ -2.01
XRN1-214ENST00000498077 CEP164Q9UPV0 1460 aa2.5□□□□□ -2.01
XRN1-214ENST00000498077 SPDYE4A6NLX3 237 aa2.5□□□□□ -2.01
XRN1-214ENST00000498077 SMARCA4P51532 1647 aa2.49□□□□□ -2.01
XRN1-214ENST00000498077 MAMSTRQ6ZN01 415 aa2.49□□□□□ -2.01
XRN1-214ENST00000498077 EHMT2Q96KQ7 1210 aa2.49□□□□□ -2.01
XRN1-214ENST00000498077 MYO15BQ96JP2 1530 aa2.48□□□□□ -2.01
XRN1-214ENST00000498077 CYB5RLQ6IPT4 315 aa2.48□□□□□ -2.01
XRN1-214ENST00000498077 PLCD3Q8N3E9 789 aa2.48□□□□□ -2.01
XRN1-214ENST00000498077 DCBLD2Q96PD2 775 aa2.47□□□□□ -2.01
XRN1-214ENST00000498077 PRKAR2AP13861 404 aaKnown RBP2.47□□□□□ -2.01
XRN1-214ENST00000498077 LAMC3Q9Y6N6 1575 aa2.47□□□□□ -2.01
XRN1-214ENST00000498077 WDR62O43379 1518 aa2.46□□□□□ -2.02
XRN1-214ENST00000498077 PLSCR2Q9NRY7 297 aa2.46□□□□□ -2.02
XRN1-214ENST00000498077 FXR2P51116 673 aaKnown RBP eCLIP2.46□□□□□ -2.02
XRN1-214ENST00000498077 GSE1Q14687 1217 aa2.46□□□□□ -2.02
XRN1-214ENST00000498077 KLHL34Q8N239 644 aa2.46□□□□□ -2.02
XRN1-214ENST00000498077 LRP5O75197 1615 aa2.46□□□□□ -2.02
XRN1-214ENST00000498077 SSUH2Q9Y2M2 353 aa2.45□□□□□ -2.02
XRN1-214ENST00000498077 GOLGA2Q08379 1002 aa2.45□□□□□ -2.02
XRN1-214ENST00000498077 MIER1Q8N108 512 aa2.45□□□□□ -2.02
XRN1-214ENST00000498077 PTPRTO14522 1441 aa2.45□□□□□ -2.02
XRN1-214ENST00000498077 PRELPP51888 382 aa2.45□□□□□ -2.02
XRN1-214ENST00000498077 SP7Q8TDD2 431 aaPredicted RBP2.45□□□□□ -2.02
XRN1-214ENST00000498077 AATKQ6ZMQ8 1374 aa2.45□□□□□ -2.02
XRN1-214ENST00000498077 PITPNM2Q9BZ72 1349 aa2.45□□□□□ -2.02
XRN1-214ENST00000498077 PCF11O94913 1555 aaKnown RBP2.44□□□□□ -2.02
XRN1-214ENST00000498077 PDS5BQ9NTI5 1447 aa2.44□□□□□ -2.02
XRN1-214ENST00000498077 MRC2Q9UBG0 1479 aa2.44□□□□□ -2.02
XRN1-214ENST00000498077 PITPNM1O00562 1244 aa2.44□□□□□ -2.02
XRN1-214ENST00000498077 PIP4P2Q8N4L2 257 aa2.44□□□□□ -2.02
XRN1-214ENST00000498077 ATF5Q9Y2D1 282 aaPredicted RBP2.44□□□□□ -2.02
XRN1-214ENST00000498077 ZRANB1Q9UGI0 708 aa2.44□□□□□ -2.02
XRN1-214ENST00000498077 TRIM52Q96A61 297 aa2.43□□□□□ -2.02
XRN1-214ENST00000498077 FAM212AQ96EL1 285 aa2.43□□□□□ -2.02
XRN1-214ENST00000498077 SNPHO15079 494 aa2.42□□□□□ -2.02
XRN1-214ENST00000498077 CD44P16070 742 aaKnown RBP2.42□□□□□ -2.02
XRN1-214ENST00000498077 SENP3-EIF4A1A0A087X0R7 540 aa2.41□□□□□ -2.02
XRN1-214ENST00000498077 SNAPC4Q5SXM2 1469 aa2.41□□□□□ -2.02
XRN1-214ENST00000498077 FARP1Q9Y4F1 1045 aaPredicted RBP2.41□□□□□ -2.02
XRN1-214ENST00000498077 SCUBE2Q9NQ36 999 aa2.41□□□□□ -2.02
XRN1-214ENST00000498077 MAP10Q9P2G4 905 aa2.41□□□□□ -2.02
XRN1-214ENST00000498077 BAZ1BQ9UIG0 1483 aaKnown RBP2.41□□□□□ -2.02
XRN1-214ENST00000498077 KIF13AQ9H1H9 1805 aa2.41□□□□□ -2.02
XRN1-214ENST00000498077 SGIP1Q9BQI5 828 aa2.4□□□□□ -2.02
XRN1-214ENST00000498077 RBM33Q96EV2 1170 aaKnown RBP2.4□□□□□ -2.03
XRN1-214ENST00000498077 CSRNP3Q8WYN3 585 aa2.4□□□□□ -2.03
XRN1-214ENST00000498077 SLC39A7Q92504 469 aa2.4□□□□□ -2.03
XRN1-214ENST00000498077 C19orf67A6NJJ6 358 aa2.39□□□□□ -2.03
XRN1-214ENST00000498077 HRCP23327 699 aa2.39□□□□□ -2.03
XRN1-214ENST00000498077 SEC24BO95487 1268 aa2.39□□□□□ -2.03
XRN1-214ENST00000498077 L3MBTL3Q96JM7 780 aaPredicted RBP2.38□□□□□ -2.03
XRN1-214ENST00000498077 ZNF579Q8NAF0 562 aaKnown RBP2.38□□□□□ -2.03
XRN1-214ENST00000498077 CFAP43Q8NDM7 1665 aa2.38□□□□□ -2.03
XRN1-214ENST00000498077 NBPF1Q3BBV0 1214 aa2.37□□□□□ -2.03
XRN1-214ENST00000498077 SPOCK2Q92563 424 aa2.37□□□□□ -2.03
XRN1-214ENST00000498077 NESP48681 1621 aa2.37□□□□□ -2.03
XRN1-214ENST00000498077 ABCC10Q5T3U5 1492 aa2.36□□□□□ -2.03
XRN1-214ENST00000498077 C7P10643 843 aa2.36□□□□□ -2.03
XRN1-214ENST00000498077 ZNF467Q7Z7K2 595 aaPredicted RBP2.36□□□□□ -2.03
XRN1-214ENST00000498077 RYDENQ9NUL5 291 aaKnown RBP2.36□□□□□ -2.03
XRN1-214ENST00000498077 SMARCA2P51531 1590 aa2.36□□□□□ -2.03
XRN1-214ENST00000498077 CDK12Q9NYV4 1490 aaPredicted RBP2.36□□□□□ -2.03
XRN1-214ENST00000498077 NHSL1Q5SYE7 1610 aa2.36□□□□□ -2.03
XRN1-214ENST00000498077 PLCG2P16885 1265 aa2.36□□□□□ -2.03
XRN1-214ENST00000498077 MKRN3Q13064 507 aaKnown RBP2.36□□□□□ -2.03
XRN1-214ENST00000498077 ATRXP46100 2492 aa2.36□□□□□ -2.03
XRN1-214ENST00000498077 ZBTB22O15209 634 aa2.36□□□□□ -2.03
XRN1-214ENST00000498077 YY1P25490 414 aa2.35□□□□□ -2.03
XRN1-214ENST00000498077 MAPKBP1O60336 1514 aa2.35□□□□□ -2.03
XRN1-214ENST00000498077 MED14O60244 1454 aa2.35□□□□□ -2.03
XRN1-214ENST00000498077 NCAPD3P42695 1498 aa2.35□□□□□ -2.03
XRN1-214ENST00000498077 STAC3Q96MF2 364 aa2.35□□□□□ -2.03
XRN1-214ENST00000498077 FKBP8Q14318 412 aa2.35□□□□□ -2.03
XRN1-214ENST00000498077 RIMBP2O15034 1052 aa2.34□□□□□ -2.03
XRN1-214ENST00000498077 RNF40O75150 1001 aa2.34□□□□□ -2.03
XRN1-214ENST00000498077 CDK11BP21127 795 aaKnown RBP2.34□□□□□ -2.03
XRN1-214ENST00000498077 IER5LQ5T953 404 aa2.34□□□□□ -2.03
XRN1-214ENST00000498077 SYNJ1O43426 1573 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms