RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 ZEB1P37275 1124 aaPredicted RBP9.06□□□□□ -0.96
PHC3-217ENST00000497658 POTEMA6NI47 508 aa9.06□□□□□ -0.96
PHC3-217ENST00000497658 PAK3O75914 559 aaPredicted RBP9.06□□□□□ -0.96
PHC3-217ENST00000497658 PHF12Q96QT6 1004 aa9.05□□□□□ -0.96
PHC3-217ENST00000497658 POTEGQ6S5H5 508 aa9.01□□□□□ -0.97
PHC3-217ENST00000497658 NPM1P06748 294 aaKnown RBP eCLIP8.98□□□□□ -0.97
PHC3-217ENST00000497658 MNX1P50219 401 aaPredicted RBP8.97□□□□□ -0.97
PHC3-217ENST00000497658 LOC105371045A0A1W2PR82 267 aa8.96□□□□□ -0.98
PHC3-217ENST00000497658 SPDYE4A6NLX3 237 aa8.95□□□□□ -0.98
PHC3-217ENST00000497658 ASTLQ6HA08 431 aaPredicted RBP8.95□□□□□ -0.98
PHC3-217ENST00000497658 PCDH10Q9P2E7 1040 aa8.95□□□□□ -0.98
PHC3-217ENST00000497658 CSRNP3Q8WYN3 585 aa8.94□□□□□ -0.98
PHC3-217ENST00000497658 METRNQ9UJH8 293 aa8.94□□□□□ -0.98
PHC3-217ENST00000497658 ATMINO43313 823 aaPredicted RBP8.93□□□□□ -0.98
PHC3-217ENST00000497658 DCAF8L2P0C7V8 631 aa8.93□□□□□ -0.98
PHC3-217ENST00000497658 POTEJP0CG39 1038 aa8.93□□□□□ -0.98
PHC3-217ENST00000497658 SLC39A7Q92504 469 aa8.93□□□□□ -0.98
PHC3-217ENST00000497658 MS4A3Q96HJ5 214 aa8.93□□□□□ -0.98
PHC3-217ENST00000497658 C7P10643 843 aa8.92□□□□□ -0.98
PHC3-217ENST00000497658 MAMSTRQ6ZN01 415 aa8.89□□□□□ -0.99
PHC3-217ENST00000497658 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
PHC3-217ENST00000497658 ABCC9O60706 1549 aa8.85□□□□□ -0.99
PHC3-217ENST00000497658 ATN1P54259 1190 aaPredicted RBP8.82□□□□□ -1
PHC3-217ENST00000497658 SCUBE2Q9NQ36 999 aa8.82□□□□□ -1
PHC3-217ENST00000497658 FAM163AQ96GL9 167 aaPredicted RBP8.81□□□□□ -1
PHC3-217ENST00000497658 MYT1Q01538 1121 aa8.8□□□□□ -1
PHC3-217ENST00000497658 TSPYL2Q9H2G4 693 aaPredicted RBP8.8□□□□□ -1
PHC3-217ENST00000497658 CCDC61Q9Y6R9 512 aa8.79□□□□□ -1
PHC3-217ENST00000497658 TRIM41Q8WV44 630 aa8.79□□□□□ -1
PHC3-217ENST00000497658 POTEFA5A3E0 1075 aa8.77□□□□□ -1
PHC3-217ENST00000497658 RSF1Q96T23 1441 aaPredicted RBP8.77□□□□□ -1.01
PHC3-217ENST00000497658 KIF12Q96FN5 646 aa8.77□□□□□ -1.01
PHC3-217ENST00000497658 BMP2KQ9NSY1 1161 aaPredicted RBP8.75□□□□□ -1.01
PHC3-217ENST00000497658 RB1CC1Q8TDY2 1594 aa8.74□□□□□ -1.01
PHC3-217ENST00000497658 TRPC6Q9Y210 931 aa8.73□□□□□ -1.01
PHC3-217ENST00000497658 TIE1P35590 1138 aa8.71□□□□□ -1.01
PHC3-217ENST00000497658 PROM2Q8N271 834 aa8.71□□□□□ -1.02
PHC3-217ENST00000497658 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
PHC3-217ENST00000497658 MAP3K13O43283 966 aa8.68□□□□□ -1.02
PHC3-217ENST00000497658 CENPBP07199 599 aaPredicted RBP8.66□□□□□ -1.02
PHC3-217ENST00000497658 COLQQ9Y215 455 aaPredicted RBP8.66□□□□□ -1.02
PHC3-217ENST00000497658 TTLL13PA6NNM8 815 aa8.65□□□□□ -1.03
PHC3-217ENST00000497658 CDAN1Q8IWY9 1227 aa8.65□□□□□ -1.03
PHC3-217ENST00000497658 SEC24BO95487 1268 aa8.63□□□□□ -1.03
PHC3-217ENST00000497658 RASEFQ8IZ41 740 aa8.62□□□□□ -1.03
PHC3-217ENST00000497658 FAM9AQ8IZU1 332 aaPredicted RBP8.62□□□□□ -1.03
PHC3-217ENST00000497658 CCER1Q8TC90 406 aaPredicted RBP8.61□□□□□ -1.03
PHC3-217ENST00000497658 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
PHC3-217ENST00000497658 SCRIBQ14160 1630 aa8.61□□□□□ -1.03
PHC3-217ENST00000497658 IER5LQ5T953 404 aa8.6□□□□□ -1.03
PHC3-217ENST00000497658 PLEKHG5O94827 1062 aa8.6□□□□□ -1.03
PHC3-217ENST00000497658 DIEXFQ68CQ4 756 aaKnown RBP8.6□□□□□ -1.03
PHC3-217ENST00000497658 SGIP1Q9BQI5 828 aa8.58□□□□□ -1.04
PHC3-217ENST00000497658 TRIM35Q9UPQ4 493 aa8.58□□□□□ -1.04
PHC3-217ENST00000497658 MIER1Q8N108 512 aa8.58□□□□□ -1.04
PHC3-217ENST00000497658 EHMT2Q96KQ7 1210 aa8.58□□□□□ -1.04
PHC3-217ENST00000497658 GTF3C3Q9Y5Q9 886 aa8.57□□□□□ -1.04
PHC3-217ENST00000497658 WRNQ14191 1432 aaPredicted RBP eCLIP8.57□□□□□ -1.04
PHC3-217ENST00000497658 ST18O60284 1047 aa8.55□□□□□ -1.04
PHC3-217ENST00000497658 SLAIN1Q8ND83 568 aa8.55□□□□□ -1.04
PHC3-217ENST00000497658 PCDHB13Q9Y5F0 798 aa8.54□□□□□ -1.04
PHC3-217ENST00000497658 NACADO15069 1562 aa8.51□□□□□ -1.05
PHC3-217ENST00000497658 MROH2BQ7Z745 1585 aa8.5□□□□□ -1.05
PHC3-217ENST00000497658 ZNF316A6NFI3 1004 aaPredicted RBP8.49□□□□□ -1.05
PHC3-217ENST00000497658 IFNL1Q8IU54 200 aa8.49□□□□□ -1.05
PHC3-217ENST00000497658 CECR2Q9BXF3 1484 aa8.48□□□□□ -1.05
PHC3-217ENST00000497658 EIF4G1Q04637 1599 aaKnown RBP8.48□□□□□ -1.05
PHC3-217ENST00000497658 BAZ1AQ9NRL2 1556 aaPredicted RBP8.48□□□□□ -1.05
PHC3-217ENST00000497658 PLCG2P16885 1265 aa8.47□□□□□ -1.05
PHC3-217ENST00000497658 NUBP1P53384 320 aa8.47□□□□□ -1.05
PHC3-217ENST00000497658 TMEM106CQ9BVX2 250 aa8.47□□□□□ -1.05
PHC3-217ENST00000497658 IRX5P78411 483 aaPredicted RBP8.46□□□□□ -1.05
PHC3-217ENST00000497658 MMRN1Q13201 1228 aa8.46□□□□□ -1.05
PHC3-217ENST00000497658 EEA1Q15075 1411 aa8.46□□□□□ -1.05
PHC3-217ENST00000497658 TNIKQ9UKE5 1360 aa8.46□□□□□ -1.05
PHC3-217ENST00000497658 PLCD3Q8N3E9 789 aa8.45□□□□□ -1.06
PHC3-217ENST00000497658 WIZO95785 1651 aa8.45□□□□□ -1.06
PHC3-217ENST00000497658 SPNS2Q8IVW8 549 aa8.45□□□□□ -1.06
PHC3-217ENST00000497658 CEP162Q5TB80 1403 aa8.44□□□□□ -1.06
PHC3-217ENST00000497658 TMEM121BQ9BXQ6 578 aaPredicted RBP8.44□□□□□ -1.06
PHC3-217ENST00000497658 ZBTB47Q9UFB7 747 aaPredicted RBP8.43□□□□□ -1.06
PHC3-217ENST00000497658 CLSPNQ9HAW4 1339 aa8.41□□□□□ -1.06
PHC3-217ENST00000497658 SNPHO15079 494 aa8.4□□□□□ -1.06
PHC3-217ENST00000497658 FAM212AQ96EL1 285 aa8.4□□□□□ -1.06
PHC3-217ENST00000497658 OCEL1Q9H607 264 aa8.4□□□□□ -1.06
PHC3-217ENST00000497658 TOP2AP11388 1531 aaKnown RBP8.38□□□□□ -1.07
PHC3-217ENST00000497658 CCDC88BA6NC98 1476 aa8.38□□□□□ -1.07
PHC3-217ENST00000497658 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.38□□□□□ -1.07
PHC3-217ENST00000497658 MARVELD3Q96A59 401 aa8.35□□□□□ -1.07
PHC3-217ENST00000497658 GOLGA3Q08378 1498 aa8.35□□□□□ -1.07
PHC3-217ENST00000497658 ABCC8Q09428 1581 aa8.34□□□□□ -1.07
PHC3-217ENST00000497658 SOGA1O94964 1423 aa8.33□□□□□ -1.08
PHC3-217ENST00000497658 SMARCA2P51531 1590 aa8.32□□□□□ -1.08
PHC3-217ENST00000497658 UBTFP17480 764 aaKnown RBP8.32□□□□□ -1.08
PHC3-217ENST00000497658 YTHDC1Q96MU7 727 aaKnown RBP8.31□□□□□ -1.08
PHC3-217ENST00000497658 SMARCA4P51532 1647 aa8.29□□□□□ -1.08
PHC3-217ENST00000497658 CEP164Q9UPV0 1460 aa8.29□□□□□ -1.08
PHC3-217ENST00000497658 PYGBP11216 843 aa8.29□□□□□ -1.08
PHC3-217ENST00000497658 DCAF8Q5TAQ9 597 aa8.28□□□□□ -1.08
PHC3-217ENST00000497658 PCDHB8Q9UN66 801 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms