RNA–Protein interactions for RNA: ENST00000495541.1

ACSL3-208, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 2

Gene ACSL3, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-208ENST00000495541 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
ACSL3-208ENST00000495541 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
ACSL3-208ENST00000495541 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
ACSL3-208ENST00000495541 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
ACSL3-208ENST00000495541 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
ACSL3-208ENST00000495541 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
ACSL3-208ENST00000495541 NPM1P06748 294 aaKnown RBP eCLIP11.68□□□□□ -0.54
ACSL3-208ENST00000495541 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
ACSL3-208ENST00000495541 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
ACSL3-208ENST00000495541 NUBP1P53384 320 aa11.63□□□□□ -0.55
ACSL3-208ENST00000495541 RASEFQ8IZ41 740 aa11.62□□□□□ -0.55
ACSL3-208ENST00000495541 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
ACSL3-208ENST00000495541 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
ACSL3-208ENST00000495541 METRNQ9UJH8 293 aa11.56□□□□□ -0.56
ACSL3-208ENST00000495541 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
ACSL3-208ENST00000495541 CCDC61Q9Y6R9 512 aa11.52□□□□□ -0.57
ACSL3-208ENST00000495541 SPOCK2Q92563 424 aa11.51□□□□□ -0.57
ACSL3-208ENST00000495541 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
ACSL3-208ENST00000495541 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
ACSL3-208ENST00000495541 FAM212AQ96EL1 285 aa11.47□□□□□ -0.57
ACSL3-208ENST00000495541 MAMSTRQ6ZN01 415 aa11.46□□□□□ -0.57
ACSL3-208ENST00000495541 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
ACSL3-208ENST00000495541 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
ACSL3-208ENST00000495541 C7P10643 843 aa11.43□□□□□ -0.58
ACSL3-208ENST00000495541 SLC39A7Q92504 469 aa11.42□□□□□ -0.58
ACSL3-208ENST00000495541 KIF12Q96FN5 646 aa11.4□□□□□ -0.58
ACSL3-208ENST00000495541 GSE1Q14687 1217 aa11.38□□□□□ -0.59
ACSL3-208ENST00000495541 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
ACSL3-208ENST00000495541 SCUBE2Q9NQ36 999 aa11.38□□□□□ -0.59
ACSL3-208ENST00000495541 POTEFA5A3E0 1075 aa11.36□□□□□ -0.59
ACSL3-208ENST00000495541 MMRN1Q13201 1228 aa11.36□□□□□ -0.59
ACSL3-208ENST00000495541 MS4A3Q96HJ5 214 aa11.36□□□□□ -0.59
ACSL3-208ENST00000495541 MAP3K13O43283 966 aa11.34□□□□□ -0.59
ACSL3-208ENST00000495541 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
ACSL3-208ENST00000495541 PYGBP11216 843 aa11.31□□□□□ -0.6
ACSL3-208ENST00000495541 CHRM1P11229 460 aaPredicted RBP11.29□□□□□ -0.6
ACSL3-208ENST00000495541 SGIP1Q9BQI5 828 aa11.29□□□□□ -0.6
ACSL3-208ENST00000495541 ATN1P54259 1190 aaPredicted RBP11.28□□□□□ -0.6
ACSL3-208ENST00000495541 SPNS2Q8IVW8 549 aa11.28□□□□□ -0.6
ACSL3-208ENST00000495541 IFNL1Q8IU54 200 aa11.26□□□□□ -0.61
ACSL3-208ENST00000495541 TRPC6Q9Y210 931 aa11.26□□□□□ -0.61
ACSL3-208ENST00000495541 PCDHB13Q9Y5F0 798 aa11.26□□□□□ -0.61
ACSL3-208ENST00000495541 PKD2Q13563 968 aa11.25□□□□□ -0.61
ACSL3-208ENST00000495541 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
ACSL3-208ENST00000495541 ST18O60284 1047 aa11.2□□□□□ -0.62
ACSL3-208ENST00000495541 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
ACSL3-208ENST00000495541 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
ACSL3-208ENST00000495541 BMP2KQ9NSY1 1161 aaPredicted RBP11.18□□□□□ -0.62
ACSL3-208ENST00000495541 TIE1P35590 1138 aa11.16□□□□□ -0.62
ACSL3-208ENST00000495541 ZNF467Q7Z7K2 595 aaPredicted RBP11.16□□□□□ -0.62
ACSL3-208ENST00000495541 COLQQ9Y215 455 aaPredicted RBP11.14□□□□□ -0.63
ACSL3-208ENST00000495541 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
ACSL3-208ENST00000495541 ECM2O94769 699 aaPredicted RBP11.12□□□□□ -0.63
ACSL3-208ENST00000495541 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
ACSL3-208ENST00000495541 RGL2O15211 777 aa11.08□□□□□ -0.64
ACSL3-208ENST00000495541 PDAP1Q13442 181 aaKnown RBP11.08□□□□□ -0.64
ACSL3-208ENST00000495541 TMEM106CQ9BVX2 250 aa11.08□□□□□ -0.64
ACSL3-208ENST00000495541 PSEN1P49768 467 aa11.06□□□□□ -0.64
ACSL3-208ENST00000495541 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
ACSL3-208ENST00000495541 VGFO15240 615 aaPredicted RBP11.01□□□□□ -0.65
ACSL3-208ENST00000495541 SLAIN1Q8ND83 568 aa11.01□□□□□ -0.65
ACSL3-208ENST00000495541 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
ACSL3-208ENST00000495541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.99□□□□□ -0.65
ACSL3-208ENST00000495541 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
ACSL3-208ENST00000495541 ZFP91Q96JP5 570 aaPredicted RBP10.99□□□□□ -0.65
ACSL3-208ENST00000495541 SEC24BO95487 1268 aa10.97□□□□□ -0.65
ACSL3-208ENST00000495541 IER5LQ5T953 404 aa10.96□□□□□ -0.65
ACSL3-208ENST00000495541 MARVELD3Q96A59 401 aa10.94□□□□□ -0.66
ACSL3-208ENST00000495541 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
ACSL3-208ENST00000495541 IRX5P78411 483 aaPredicted RBP10.91□□□□□ -0.66
ACSL3-208ENST00000495541 BCL11BQ9C0K0 894 aaPredicted RBP10.9□□□□□ -0.66
ACSL3-208ENST00000495541 TAOK2Q9UL54 1235 aa10.9□□□□□ -0.66
ACSL3-208ENST00000495541 ILDR1Q86SU0 546 aaPredicted RBP10.88□□□□□ -0.67
ACSL3-208ENST00000495541 STK25O00506 426 aa10.86□□□□□ -0.67
ACSL3-208ENST00000495541 HS6ST3Q8IZP7 471 aa10.86□□□□□ -0.67
ACSL3-208ENST00000495541 EFCAB3Q8N7B9 438 aa10.86□□□□□ -0.67
ACSL3-208ENST00000495541 PDCD7Q8N8D1 485 aaKnown RBP10.86□□□□□ -0.67
ACSL3-208ENST00000495541 MKRN3Q13064 507 aaKnown RBP10.85□□□□□ -0.67
ACSL3-208ENST00000495541 TMEM121BQ9BXQ6 578 aaPredicted RBP10.85□□□□□ -0.67
ACSL3-208ENST00000495541 KRTAP3-3Q9BYR6 98 aa10.85□□□□□ -0.67
ACSL3-208ENST00000495541 KRTAP3-2Q9BYR7 98 aa10.85□□□□□ -0.67
ACSL3-208ENST00000495541 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
ACSL3-208ENST00000495541 GOLGA2Q08379 1002 aa10.84□□□□□ -0.67
ACSL3-208ENST00000495541 POTEB3A0JP26 581 aa10.82□□□□□ -0.68
ACSL3-208ENST00000495541 PLCG2P16885 1265 aa10.82□□□□□ -0.68
ACSL3-208ENST00000495541 POTEBQ6S5H4 581 aa10.82□□□□□ -0.68
ACSL3-208ENST00000495541 OCEL1Q9H607 264 aa10.81□□□□□ -0.68
ACSL3-208ENST00000495541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.8□□□□□ -0.685e-18■■□□□ 11.6
ACSL3-208ENST00000495541 CHGAP10645 457 aaKnown RBP10.78□□□□□ -0.68
ACSL3-208ENST00000495541 DNAJC5Q9H3Z4 198 aa10.78□□□□□ -0.68
ACSL3-208ENST00000495541 SOX12O15370 315 aa10.77□□□□□ -0.69
ACSL3-208ENST00000495541 MS4A4AQ96JQ5 239 aa10.77□□□□□ -0.69
ACSL3-208ENST00000495541 MFRPQ9BY79 579 aa10.77□□□□□ -0.69
ACSL3-208ENST00000495541 FBXO22Q8NEZ5 403 aa10.76□□□□□ -0.69
ACSL3-208ENST00000495541 PHF8Q9UPP1 1060 aa10.76□□□□□ -0.69
ACSL3-208ENST00000495541 NKX1-1Q15270 411 aaPredicted RBP10.74□□□□□ -0.69
ACSL3-208ENST00000495541 DPY19L2Q6NUT2 758 aa10.73□□□□□ -0.69
ACSL3-208ENST00000495541 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
ACSL3-208ENST00000495541 NLRP6P59044 892 aa10.69□□□□□ -0.7
ACSL3-208ENST00000495541 HS3ST6Q96QI5 342 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms