RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 ECM2O94769 699 aaPredicted RBP15.84■□□□□ 0.13
MSL3-217ENST00000494268 HAX1O00165 279 aa15.83■□□□□ 0.12
MSL3-217ENST00000494268 ZRANB1Q9UGI0 708 aa15.81■□□□□ 0.12
MSL3-217ENST00000494268 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
MSL3-217ENST00000494268 CCDC61Q9Y6R9 512 aa15.8■□□□□ 0.12
MSL3-217ENST00000494268 PYGBP11216 843 aa15.79■□□□□ 0.12
MSL3-217ENST00000494268 EVX2Q03828 476 aa15.78■□□□□ 0.12
MSL3-217ENST00000494268 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
MSL3-217ENST00000494268 RGL2O15211 777 aa15.72■□□□□ 0.11
MSL3-217ENST00000494268 CHRM1P11229 460 aaPredicted RBP15.71■□□□□ 0.11
MSL3-217ENST00000494268 PHF12Q96QT6 1004 aa15.7■□□□□ 0.1
MSL3-217ENST00000494268 RNF25Q96BH1 459 aaPredicted RBP15.67■□□□□ 0.1
MSL3-217ENST00000494268 ZNF579Q8NAF0 562 aaKnown RBP15.64■□□□□ 0.09
MSL3-217ENST00000494268 KIF12Q96FN5 646 aa15.64■□□□□ 0.09
MSL3-217ENST00000494268 MAP3K13O43283 966 aa15.62■□□□□ 0.09
MSL3-217ENST00000494268 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
MSL3-217ENST00000494268 PCDHB8Q9UN66 801 aa15.57■□□□□ 0.08
MSL3-217ENST00000494268 PCDHB13Q9Y5F0 798 aa15.57■□□□□ 0.08
MSL3-217ENST00000494268 RIOK3O14730 519 aaKnown RBP15.56■□□□□ 0.08
MSL3-217ENST00000494268 IFNL1Q8IU54 200 aa15.54■□□□□ 0.08
MSL3-217ENST00000494268 SGIP1Q9BQI5 828 aa15.51■□□□□ 0.07
MSL3-217ENST00000494268 ZNF467Q7Z7K2 595 aaPredicted RBP15.5■□□□□ 0.07
MSL3-217ENST00000494268 MS4A3Q96HJ5 214 aa15.49■□□□□ 0.07
MSL3-217ENST00000494268 GALR2O43603 387 aaPredicted RBP15.45■□□□□ 0.06
MSL3-217ENST00000494268 VGFO15240 615 aaPredicted RBP15.44■□□□□ 0.06
MSL3-217ENST00000494268 TRPC6Q9Y210 931 aa15.43■□□□□ 0.06
MSL3-217ENST00000494268 GABBR2O75899 941 aa15.42■□□□□ 0.06
MSL3-217ENST00000494268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.41■□□□□ 0.06
MSL3-217ENST00000494268 CHGAP10645 457 aaKnown RBP15.41■□□□□ 0.06
MSL3-217ENST00000494268 ZFP91Q96JP5 570 aaPredicted RBP15.41■□□□□ 0.06
MSL3-217ENST00000494268 PDAP1Q13442 181 aaKnown RBP15.39■□□□□ 0.05
MSL3-217ENST00000494268 PSEN1P49768 467 aa15.38■□□□□ 0.05
MSL3-217ENST00000494268 TAOK2Q9UL54 1235 aa15.38■□□□□ 0.05
MSL3-217ENST00000494268 CLCN6P51797 869 aa15.36■□□□□ 0.05
MSL3-217ENST00000494268 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
MSL3-217ENST00000494268 STK25O00506 426 aa15.34■□□□□ 0.05
MSL3-217ENST00000494268 HS6ST3Q8IZP7 471 aa15.32■□□□□ 0.04
MSL3-217ENST00000494268 BCL11BQ9C0K0 894 aaPredicted RBP15.32■□□□□ 0.04
MSL3-217ENST00000494268 STK24Q9Y6E0 443 aa15.3■□□□□ 0.04
MSL3-217ENST00000494268 TMEM106CQ9BVX2 250 aa15.28■□□□□ 0.04
MSL3-217ENST00000494268 TIE1P35590 1138 aa15.25■□□□□ 0.03
MSL3-217ENST00000494268 BMP2KQ9NSY1 1161 aaPredicted RBP15.25■□□□□ 0.03
MSL3-217ENST00000494268 TTLL13PA6NNM8 815 aa15.23■□□□□ 0.03
MSL3-217ENST00000494268 BBXQ8WY36 941 aaPredicted RBP15.21■□□□□ 0.03
MSL3-217ENST00000494268 CABP2Q9NPB3 220 aa15.21■□□□□ 0.03
MSL3-217ENST00000494268 ATMINO43313 823 aaPredicted RBP15.17■□□□□ 0.02
MSL3-217ENST00000494268 ATN1P54259 1190 aaPredicted RBP15.17■□□□□ 0.02
MSL3-217ENST00000494268 NKX1-1Q15270 411 aaPredicted RBP15.17■□□□□ 0.02
MSL3-217ENST00000494268 DCBLD2Q96PD2 775 aa15.16■□□□□ 0.02
MSL3-217ENST00000494268 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
MSL3-217ENST00000494268 ASTLQ6HA08 431 aaPredicted RBP15.15■□□□□ 0.02
MSL3-217ENST00000494268 EFCAB3Q8N7B9 438 aa15.15■□□□□ 0.02
MSL3-217ENST00000494268 POTEIP0CG38 1075 aa15.13■□□□□ 0.01
MSL3-217ENST00000494268 TRIM35Q9UPQ4 493 aa15.13■□□□□ 0.01
MSL3-217ENST00000494268 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
MSL3-217ENST00000494268 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
MSL3-217ENST00000494268 GOLGA2Q08379 1002 aa15.09■□□□□ 0.01
MSL3-217ENST00000494268 PAXIP1Q6ZW49 1069 aaPredicted RBP15.06■□□□□ 0
MSL3-217ENST00000494268 MKRN3Q13064 507 aaKnown RBP15.04■□□□□ -0
MSL3-217ENST00000494268 CFAP44Q96MT7 982 aa15.04■□□□□ -0
MSL3-217ENST00000494268 MFRPQ9BY79 579 aa15.04■□□□□ -0
MSL3-217ENST00000494268 SOX12O15370 315 aa15.02■□□□□ -0
MSL3-217ENST00000494268 GTPBP6O43824 516 aaPredicted RBP15.02■□□□□ -0
MSL3-217ENST00000494268 SPRYD3Q8NCJ5 442 aa15.02■□□□□ -0
MSL3-217ENST00000494268 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
MSL3-217ENST00000494268 PLCB2Q00722 1185 aa15.01□□□□□ -0.01
MSL3-217ENST00000494268 FBXO22Q8NEZ5 403 aa14.97□□□□□ -0.01
MSL3-217ENST00000494268 NLRP6P59044 892 aa14.95□□□□□ -0.02
MSL3-217ENST00000494268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.95□□□□□ -0.022e-8■■■■■ 35.5
MSL3-217ENST00000494268 MS4A4AQ96JQ5 239 aa14.93□□□□□ -0.02
MSL3-217ENST00000494268 IRX5P78411 483 aaPredicted RBP14.92□□□□□ -0.02
MSL3-217ENST00000494268 IER5LQ5T953 404 aa14.92□□□□□ -0.02
MSL3-217ENST00000494268 ILDR1Q86SU0 546 aaPredicted RBP14.91□□□□□ -0.02
MSL3-217ENST00000494268 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
MSL3-217ENST00000494268 COLQQ9Y215 455 aaPredicted RBP14.9□□□□□ -0.02
MSL3-217ENST00000494268 PPP1R37O75864 691 aa14.89□□□□□ -0.03
MSL3-217ENST00000494268 C7P10643 843 aa14.88□□□□□ -0.03
MSL3-217ENST00000494268 DPY19L2Q6NUT2 758 aa14.88□□□□□ -0.03
MSL3-217ENST00000494268 RYDENQ9NUL5 291 aaKnown RBP14.88□□□□□ -0.03
MSL3-217ENST00000494268 METRNQ9UJH8 293 aa14.88□□□□□ -0.03
MSL3-217ENST00000494268 POTEFA5A3E0 1075 aa14.87□□□□□ -0.03
MSL3-217ENST00000494268 PDCD7Q8N8D1 485 aaKnown RBP14.87□□□□□ -0.03
MSL3-217ENST00000494268 OCEL1Q9H607 264 aa14.87□□□□□ -0.03
MSL3-217ENST00000494268 SEC24BO95487 1268 aa14.85□□□□□ -0.03
MSL3-217ENST00000494268 PLCG2P16885 1265 aa14.83□□□□□ -0.04
MSL3-217ENST00000494268 HAP1P54257 671 aaPredicted RBP14.81□□□□□ -0.04
MSL3-217ENST00000494268 TSHZ2Q9NRE2 1034 aa14.81□□□□□ -0.04
MSL3-217ENST00000494268 SLC24A1O60721 1099 aa14.72□□□□□ -0.05
MSL3-217ENST00000494268 CADPS2Q86UW7 1296 aa14.68□□□□□ -0.06
MSL3-217ENST00000494268 BOLA1Q9Y3E2 137 aa14.68□□□□□ -0.06
MSL3-217ENST00000494268 POTEB2H3BUK9 544 aa14.67□□□□□ -0.06
MSL3-217ENST00000494268 MICALL2Q8IY33 904 aa14.66□□□□□ -0.06
MSL3-217ENST00000494268 L3MBTL3Q96JM7 780 aaPredicted RBP14.66□□□□□ -0.06
MSL3-217ENST00000494268 TMEM121BQ9BXQ6 578 aaPredicted RBP14.64□□□□□ -0.07
MSL3-217ENST00000494268 POTEJP0CG39 1038 aa14.62□□□□□ -0.07
MSL3-217ENST00000494268 G3V3G9 751 aa14.61□□□□□ -0.07
MSL3-217ENST00000494268 KDM2AQ9Y2K7 1162 aa14.59□□□□□ -0.07
MSL3-217ENST00000494268 VSIG10Q8N0Z9 540 aa14.54□□□□□ -0.08
MSL3-217ENST00000494268 NCKAP5LQ9HCH0 1330 aa14.53□□□□□ -0.08
MSL3-217ENST00000494268 TMEM92Q6UXU6 159 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms