RNA–Protein interactions for RNA: ENST00000492983.1

ATP13A3-209, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-209ENST00000492983 MS4A3Q96HJ5 214 aa12.51□□□□□ -0.41
ATP13A3-209ENST00000492983 ATMINO43313 823 aaPredicted RBP12.49□□□□□ -0.41
ATP13A3-209ENST00000492983 METRNQ9UJH8 293 aa12.48□□□□□ -0.41
ATP13A3-209ENST00000492983 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
ATP13A3-209ENST00000492983 C7P10643 843 aa12.44□□□□□ -0.42
ATP13A3-209ENST00000492983 LCE2DQ5TA82 110 aaPredicted RBP12.44□□□□□ -0.42
ATP13A3-209ENST00000492983 PROM2Q8N271 834 aa12.4□□□□□ -0.42
ATP13A3-209ENST00000492983 PCDH10Q9P2E7 1040 aa12.38□□□□□ -0.43
ATP13A3-209ENST00000492983 CCDC61Q9Y6R9 512 aa12.38□□□□□ -0.43
ATP13A3-209ENST00000492983 FKBP8Q14318 412 aa12.35□□□□□ -0.43
ATP13A3-209ENST00000492983 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
ATP13A3-209ENST00000492983 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
ATP13A3-209ENST00000492983 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
ATP13A3-209ENST00000492983 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
ATP13A3-209ENST00000492983 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
ATP13A3-209ENST00000492983 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.45
ATP13A3-209ENST00000492983 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
ATP13A3-209ENST00000492983 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
ATP13A3-209ENST00000492983 TIE1P35590 1138 aa12.21□□□□□ -0.45
ATP13A3-209ENST00000492983 MAP3K13O43283 966 aa12.17□□□□□ -0.46
ATP13A3-209ENST00000492983 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
ATP13A3-209ENST00000492983 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
ATP13A3-209ENST00000492983 COLQQ9Y215 455 aaPredicted RBP12.15□□□□□ -0.46
ATP13A3-209ENST00000492983 TTLL13PA6NNM8 815 aa12.12□□□□□ -0.47
ATP13A3-209ENST00000492983 IER5LQ5T953 404 aa12.06□□□□□ -0.48
ATP13A3-209ENST00000492983 SGIP1Q9BQI5 828 aa12.04□□□□□ -0.48
ATP13A3-209ENST00000492983 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
ATP13A3-209ENST00000492983 SEC24BO95487 1268 aa11.99□□□□□ -0.49
ATP13A3-209ENST00000492983 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
ATP13A3-209ENST00000492983 MIER1Q8N108 512 aa11.98□□□□□ -0.49
ATP13A3-209ENST00000492983 NUBP1P53384 320 aa11.96□□□□□ -0.49
ATP13A3-209ENST00000492983 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
ATP13A3-209ENST00000492983 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
ATP13A3-209ENST00000492983 ST18O60284 1047 aa11.93□□□□□ -0.5
ATP13A3-209ENST00000492983 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
ATP13A3-209ENST00000492983 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
ATP13A3-209ENST00000492983 IRX5P78411 483 aaPredicted RBP11.88□□□□□ -0.51
ATP13A3-209ENST00000492983 RTN4Q9NQC3 1192 aaKnown RBP11.87□□□□□ -0.51
ATP13A3-209ENST00000492983 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
ATP13A3-209ENST00000492983 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
ATP13A3-209ENST00000492983 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
ATP13A3-209ENST00000492983 PLCG2P16885 1265 aa11.82□□□□□ -0.52
ATP13A3-209ENST00000492983 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
ATP13A3-209ENST00000492983 TMEM121BQ9BXQ6 578 aaPredicted RBP11.78□□□□□ -0.52
ATP13A3-209ENST00000492983 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
ATP13A3-209ENST00000492983 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
ATP13A3-209ENST00000492983 SPNS2Q8IVW8 549 aa11.75□□□□□ -0.53
ATP13A3-209ENST00000492983 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
ATP13A3-209ENST00000492983 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
ATP13A3-209ENST00000492983 SNPHO15079 494 aa11.66□□□□□ -0.54
ATP13A3-209ENST00000492983 PDCD7Q8N8D1 485 aaKnown RBP11.66□□□□□ -0.54
ATP13A3-209ENST00000492983 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
ATP13A3-209ENST00000492983 MARVELD3Q96A59 401 aa11.63□□□□□ -0.55
ATP13A3-209ENST00000492983 PCDHB8Q9UN66 801 aa11.63□□□□□ -0.55
ATP13A3-209ENST00000492983 PYGBP11216 843 aa11.62□□□□□ -0.55
ATP13A3-209ENST00000492983 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
ATP13A3-209ENST00000492983 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
ATP13A3-209ENST00000492983 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
ATP13A3-209ENST00000492983 KRTAP3-3Q9BYR6 98 aa11.57□□□□□ -0.56
ATP13A3-209ENST00000492983 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
ATP13A3-209ENST00000492983 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
ATP13A3-209ENST00000492983 ILDR1Q86SU0 546 aaPredicted RBP11.53□□□□□ -0.56
ATP13A3-209ENST00000492983 EMP3P54852 163 aa11.5□□□□□ -0.57
ATP13A3-209ENST00000492983 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
ATP13A3-209ENST00000492983 ZNF467Q7Z7K2 595 aaPredicted RBP11.48□□□□□ -0.57
ATP13A3-209ENST00000492983 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
ATP13A3-209ENST00000492983 HS3ST6Q96QI5 342 aa11.48□□□□□ -0.57
ATP13A3-209ENST00000492983 IFNLR1Q8IU57 520 aaPredicted RBP11.47□□□□□ -0.57
ATP13A3-209ENST00000492983 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.57
ATP13A3-209ENST00000492983 MKRN3Q13064 507 aaKnown RBP11.43□□□□□ -0.58
ATP13A3-209ENST00000492983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.584e-7■■■□□ 14.9
ATP13A3-209ENST00000492983 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
ATP13A3-209ENST00000492983 HOXB3P14651 431 aaPredicted RBP11.4□□□□□ -0.58
ATP13A3-209ENST00000492983 GSE1Q14687 1217 aa11.4□□□□□ -0.58
ATP13A3-209ENST00000492983 PSEN1P49768 467 aa11.39□□□□□ -0.59
ATP13A3-209ENST00000492983 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
ATP13A3-209ENST00000492983 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
ATP13A3-209ENST00000492983 DPY19L2Q6NUT2 758 aa11.36□□□□□ -0.59
ATP13A3-209ENST00000492983 SLC24A1O60721 1099 aa11.31□□□□□ -0.6
ATP13A3-209ENST00000492983 HOXB1P14653 301 aaPredicted RBP11.31□□□□□ -0.6
ATP13A3-209ENST00000492983 PDAP1Q13442 181 aaKnown RBP11.31□□□□□ -0.6
ATP13A3-209ENST00000492983 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
ATP13A3-209ENST00000492983 SPOCK2Q92563 424 aa11.27□□□□□ -0.61
ATP13A3-209ENST00000492983 DCAF8L2P0C7V8 631 aa11.25□□□□□ -0.61
ATP13A3-209ENST00000492983 CABP2Q9NPB3 220 aa11.24□□□□□ -0.61
ATP13A3-209ENST00000492983 PKD2Q13563 968 aa11.22□□□□□ -0.61
ATP13A3-209ENST00000492983 DOK7Q18PE1 504 aa11.19□□□□□ -0.62
ATP13A3-209ENST00000492983 RNF166Q96A37 237 aaPredicted RBP11.17□□□□□ -0.62
ATP13A3-209ENST00000492983 ERBB3P21860 1342 aa11.16□□□□□ -0.62
ATP13A3-209ENST00000492983 ZNF710Q8N1W2 664 aa11.16□□□□□ -0.62
ATP13A3-209ENST00000492983 G3V3G9 751 aa11.14□□□□□ -0.63
ATP13A3-209ENST00000492983 TMEM92Q6UXU6 159 aa11.14□□□□□ -0.63
ATP13A3-209ENST00000492983 ECM2O94769 699 aaPredicted RBP11.12□□□□□ -0.63
ATP13A3-209ENST00000492983 VARS2Q5ST30 1063 aaKnown RBP11.12□□□□□ -0.63
ATP13A3-209ENST00000492983 ZSWIM6Q9HCJ5 1215 aa11.1□□□□□ -0.63
ATP13A3-209ENST00000492983 MYT1LQ9UL68 1186 aa11.1□□□□□ -0.63
ATP13A3-209ENST00000492983 CIZ1Q9ULV3 898 aaPredicted RBP11.1□□□□□ -0.63
ATP13A3-209ENST00000492983 GPR153Q6NV75 609 aa11.09□□□□□ -0.63
ATP13A3-209ENST00000492983 ZNF687Q8N1G0 1237 aa11.09□□□□□ -0.63
ATP13A3-209ENST00000492983 MICALL2Q8IY33 904 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms