RNA–Protein interactions for RNA: ENST00000491510.1

TOP2B-207, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 584 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-207ENST00000491510 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
TOP2B-207ENST00000491510 MS4A3Q96HJ5 214 aa14.4□□□□□ -0.1
TOP2B-207ENST00000491510 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
TOP2B-207ENST00000491510 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
TOP2B-207ENST00000491510 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
TOP2B-207ENST00000491510 KIF12Q96FN5 646 aa14.3□□□□□ -0.12
TOP2B-207ENST00000491510 ATMINO43313 823 aaPredicted RBP14.26□□□□□ -0.13
TOP2B-207ENST00000491510 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
TOP2B-207ENST00000491510 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
TOP2B-207ENST00000491510 SLC39A7Q92504 469 aa14.24□□□□□ -0.13
TOP2B-207ENST00000491510 MAP3K13O43283 966 aa14.22□□□□□ -0.13
TOP2B-207ENST00000491510 C7P10643 843 aa14.21□□□□□ -0.13
TOP2B-207ENST00000491510 METRNQ9UJH8 293 aa14.21□□□□□ -0.13
TOP2B-207ENST00000491510 NUBP1P53384 320 aa14.2□□□□□ -0.14
TOP2B-207ENST00000491510 FAM212AQ96EL1 285 aa14.2□□□□□ -0.14
TOP2B-207ENST00000491510 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
TOP2B-207ENST00000491510 POTEB2H3BUK9 544 aa14.15□□□□□ -0.14
TOP2B-207ENST00000491510 TIE1P35590 1138 aa14.15□□□□□ -0.14
TOP2B-207ENST00000491510 IFNLR1Q8IU57 520 aaPredicted RBP14.15□□□□□ -0.14
TOP2B-207ENST00000491510 SGIP1Q9BQI5 828 aa14.15□□□□□ -0.14
TOP2B-207ENST00000491510 OTUD5Q96G74 571 aa14.13□□□□□ -0.15
TOP2B-207ENST00000491510 BMP2KQ9NSY1 1161 aaPredicted RBP14.13□□□□□ -0.15
TOP2B-207ENST00000491510 PCDHB13Q9Y5F0 798 aa14.13□□□□□ -0.15
TOP2B-207ENST00000491510 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
TOP2B-207ENST00000491510 TRPC6Q9Y210 931 aa14.1□□□□□ -0.15
TOP2B-207ENST00000491510 DCAF8Q5TAQ9 597 aa14.06□□□□□ -0.16
TOP2B-207ENST00000491510 MAMSTRQ6ZN01 415 aa14.05□□□□□ -0.16
TOP2B-207ENST00000491510 TTLL13PA6NNM8 815 aa14.04□□□□□ -0.16
TOP2B-207ENST00000491510 IFNL1Q8IU54 200 aa14□□□□□ -0.17
TOP2B-207ENST00000491510 SEC24BO95487 1268 aa13.99□□□□□ -0.17
TOP2B-207ENST00000491510 SCUBE2Q9NQ36 999 aa13.98□□□□□ -0.17
TOP2B-207ENST00000491510 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
TOP2B-207ENST00000491510 PYGBP11216 843 aa13.95□□□□□ -0.18
TOP2B-207ENST00000491510 IER5LQ5T953 404 aa13.95□□□□□ -0.18
TOP2B-207ENST00000491510 POTEJP0CG39 1038 aa13.94□□□□□ -0.18
TOP2B-207ENST00000491510 GSE1Q14687 1217 aa13.94□□□□□ -0.18
TOP2B-207ENST00000491510 TMEM106CQ9BVX2 250 aa13.94□□□□□ -0.18
TOP2B-207ENST00000491510 POTEFA5A3E0 1075 aa13.91□□□□□ -0.18
TOP2B-207ENST00000491510 CIZ1Q9ULV3 898 aaPredicted RBP13.89□□□□□ -0.19
TOP2B-207ENST00000491510 AMER1Q5JTC6 1135 aaPredicted RBP13.88□□□□□ -0.19
TOP2B-207ENST00000491510 COLQQ9Y215 455 aaPredicted RBP13.87□□□□□ -0.19
TOP2B-207ENST00000491510 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
TOP2B-207ENST00000491510 PCDHB8Q9UN66 801 aa13.83□□□□□ -0.2
TOP2B-207ENST00000491510 PLCG2P16885 1265 aa13.81□□□□□ -0.2
TOP2B-207ENST00000491510 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
TOP2B-207ENST00000491510 POTEMA6NI47 508 aa13.77□□□□□ -0.21
TOP2B-207ENST00000491510 CHRM1P11229 460 aaPredicted RBP13.76□□□□□ -0.21
TOP2B-207ENST00000491510 IRX5P78411 483 aaPredicted RBP13.73□□□□□ -0.21
TOP2B-207ENST00000491510 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
TOP2B-207ENST00000491510 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
TOP2B-207ENST00000491510 OCEL1Q9H607 264 aa13.72□□□□□ -0.21
TOP2B-207ENST00000491510 GOLGA2Q08379 1002 aa13.71□□□□□ -0.21
TOP2B-207ENST00000491510 ECM2O94769 699 aaPredicted RBP13.7□□□□□ -0.22
TOP2B-207ENST00000491510 RTN4Q9NQC3 1192 aaKnown RBP13.67□□□□□ -0.22
TOP2B-207ENST00000491510 PLSCR2Q9NRY7 297 aa13.67□□□□□ -0.22
TOP2B-207ENST00000491510 PKD2Q13563 968 aa13.66□□□□□ -0.22
TOP2B-207ENST00000491510 MKRN3Q13064 507 aaKnown RBP13.65□□□□□ -0.22
TOP2B-207ENST00000491510 SLAIN1Q8ND83 568 aa13.65□□□□□ -0.22
TOP2B-207ENST00000491510 PSEN1P49768 467 aa13.64□□□□□ -0.23
TOP2B-207ENST00000491510 PDAP1Q13442 181 aaKnown RBP13.61□□□□□ -0.23
TOP2B-207ENST00000491510 PCDH10Q9P2E7 1040 aa13.61□□□□□ -0.23
TOP2B-207ENST00000491510 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
TOP2B-207ENST00000491510 LCE2DQ5TA82 110 aaPredicted RBP13.58□□□□□ -0.24
TOP2B-207ENST00000491510 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
TOP2B-207ENST00000491510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.54□□□□□ -0.249e-9■■■■■ 31.6
TOP2B-207ENST00000491510 L3MBTL3Q96JM7 780 aaPredicted RBP13.53□□□□□ -0.24
TOP2B-207ENST00000491510 RIOK3O14730 519 aaKnown RBP13.52□□□□□ -0.25
TOP2B-207ENST00000491510 PDCD7Q8N8D1 485 aaKnown RBP13.52□□□□□ -0.25
TOP2B-207ENST00000491510 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
TOP2B-207ENST00000491510 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
TOP2B-207ENST00000491510 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
TOP2B-207ENST00000491510 SNPHO15079 494 aa13.47□□□□□ -0.25
TOP2B-207ENST00000491510 RGL2O15211 777 aa13.47□□□□□ -0.25
TOP2B-207ENST00000491510 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
TOP2B-207ENST00000491510 ST18O60284 1047 aa13.44□□□□□ -0.26
TOP2B-207ENST00000491510 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
TOP2B-207ENST00000491510 G3V3G9 751 aa13.42□□□□□ -0.26
TOP2B-207ENST00000491510 ILDR1Q86SU0 546 aaPredicted RBP13.4□□□□□ -0.26
TOP2B-207ENST00000491510 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
TOP2B-207ENST00000491510 CDAN1Q8IWY9 1227 aa13.35□□□□□ -0.27
TOP2B-207ENST00000491510 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-207ENST00000491510 DPY19L2Q6NUT2 758 aa13.33□□□□□ -0.28
TOP2B-207ENST00000491510 ZFP91Q96JP5 570 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-207ENST00000491510 BOLA1Q9Y3E2 137 aa13.33□□□□□ -0.28
TOP2B-207ENST00000491510 STK25O00506 426 aa13.32□□□□□ -0.28
TOP2B-207ENST00000491510 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
TOP2B-207ENST00000491510 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
TOP2B-207ENST00000491510 STK24Q9Y6E0 443 aa13.28□□□□□ -0.28
TOP2B-207ENST00000491510 HS6ST3Q8IZP7 471 aa13.27□□□□□ -0.29
TOP2B-207ENST00000491510 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
TOP2B-207ENST00000491510 SOX12O15370 315 aa13.23□□□□□ -0.29
TOP2B-207ENST00000491510 MARVELD3Q96A59 401 aa13.22□□□□□ -0.29
TOP2B-207ENST00000491510 EMP3P54852 163 aa13.19□□□□□ -0.3
TOP2B-207ENST00000491510 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
TOP2B-207ENST00000491510 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
TOP2B-207ENST00000491510 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
TOP2B-207ENST00000491510 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
TOP2B-207ENST00000491510 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
TOP2B-207ENST00000491510 DNAJC5Q9H3Z4 198 aa13.11□□□□□ -0.31
TOP2B-207ENST00000491510 PHF8Q9UPP1 1060 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms