RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 DHX57Q6P158 1386 aaKnown RBP15.2■□□□□ 0.02
CRNKL1-204ENST00000490910 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
CRNKL1-204ENST00000490910 DDRGK1Q96HY6 314 aa15.15■□□□□ 0.02
CRNKL1-204ENST00000490910 ANO8Q9HCE9 1232 aaPredicted RBP15.15■□□□□ 0.02
CRNKL1-204ENST00000490910 TIMELESSQ9UNS1 1208 aa15.14■□□□□ 0.01
CRNKL1-204ENST00000490910 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
CRNKL1-204ENST00000490910 IPO9Q96P70 1041 aaKnown RBP15.13■□□□□ 0.01
CRNKL1-204ENST00000490910 ZNF326Q5BKZ1 582 aaKnown RBP15.13■□□□□ 0.01
CRNKL1-204ENST00000490910 EIF4G2P78344 907 aaKnown RBP eCLIP15.12■□□□□ 0.01
CRNKL1-204ENST00000490910 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
CRNKL1-204ENST00000490910 MSH5O43196 834 aa15.1■□□□□ 0.01
CRNKL1-204ENST00000490910 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
CRNKL1-204ENST00000490910 ABCC8Q09428 1581 aa15.1■□□□□ 0.01
CRNKL1-204ENST00000490910 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
CRNKL1-204ENST00000490910 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ 0
CRNKL1-204ENST00000490910 KANK4Q5T7N3 995 aaPredicted RBP15.03■□□□□ -0
CRNKL1-204ENST00000490910 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
CRNKL1-204ENST00000490910 RAB3GAP2Q9H2M9 1393 aa15.03■□□□□ -0
CRNKL1-204ENST00000490910 ARXQ96QS3 562 aa15.03■□□□□ -0
CRNKL1-204ENST00000490910 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
CRNKL1-204ENST00000490910 USP35Q9P2H5 1018 aa15□□□□□ -0.01
CRNKL1-204ENST00000490910 PPP1R15AO75807 674 aaPredicted RBP14.99□□□□□ -0.01
CRNKL1-204ENST00000490910 SENP3-EIF4A1A0A087X0R7 540 aa14.98□□□□□ -0.01
CRNKL1-204ENST00000490910 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
CRNKL1-204ENST00000490910 NAP1L5Q96NT1 182 aaPredicted RBP14.95□□□□□ -0.02
CRNKL1-204ENST00000490910 IL27Q8NEV9 243 aa14.94□□□□□ -0.02
CRNKL1-204ENST00000490910 UPF2Q9HAU5 1272 aaKnown RBP14.93□□□□□ -0.02
CRNKL1-204ENST00000490910 TCERG1O14776 1098 aaKnown RBP14.92□□□□□ -0.02
CRNKL1-204ENST00000490910 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
CRNKL1-204ENST00000490910 BAZ1AQ9NRL2 1556 aaPredicted RBP14.92□□□□□ -0.02
CRNKL1-204ENST00000490910 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
CRNKL1-204ENST00000490910 CANXP27824 592 aaKnown RBP14.91□□□□□ -0.02
CRNKL1-204ENST00000490910 ANP32BQ92688 251 aaKnown RBP14.9□□□□□ -0.02
CRNKL1-204ENST00000490910 WIZO95785 1651 aa14.9□□□□□ -0.02
CRNKL1-204ENST00000490910 CHIC2Q9UKJ5 165 aa14.89□□□□□ -0.03
CRNKL1-204ENST00000490910 RSPH6AQ9H0K4 717 aa14.89□□□□□ -0.03
CRNKL1-204ENST00000490910 HSPA5P11021 654 aaKnown RBP14.88□□□□□ -0.03
CRNKL1-204ENST00000490910 BECN1Q14457 450 aa14.88□□□□□ -0.03
CRNKL1-204ENST00000490910 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.88□□□□□ -0.03
CRNKL1-204ENST00000490910 GSE1Q14687 1217 aa14.87□□□□□ -0.03
CRNKL1-204ENST00000490910 NUDCQ9Y266 331 aa14.85□□□□□ -0.03
CRNKL1-204ENST00000490910 MTUS2Q5JR59 1369 aa14.84□□□□□ -0.03
CRNKL1-204ENST00000490910 TRIM44Q96DX7 344 aaPredicted RBP14.83□□□□□ -0.03
CRNKL1-204ENST00000490910 ZBED9Q6R2W3 1325 aa14.83□□□□□ -0.04
CRNKL1-204ENST00000490910 RRP7BPQ9NSQ0 103 aa14.82□□□□□ -0.04
CRNKL1-204ENST00000490910 L1TD1Q5T7N2 865 aaKnown RBP14.82□□□□□ -0.04
CRNKL1-204ENST00000490910 BAZ1BQ9UIG0 1483 aaKnown RBP14.81□□□□□ -0.04
CRNKL1-204ENST00000490910 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
CRNKL1-204ENST00000490910 PDE4AP27815 886 aa14.8□□□□□ -0.04
CRNKL1-204ENST00000490910 HSP90AA1P07900 732 aaKnown RBP14.79□□□□□ -0.04
CRNKL1-204ENST00000490910 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
CRNKL1-204ENST00000490910 RGS3P49796 1198 aa14.77□□□□□ -0.04
CRNKL1-204ENST00000490910 VSIG10Q8N0Z9 540 aa14.77□□□□□ -0.05
CRNKL1-204ENST00000490910 KIF27Q86VH2 1401 aa14.76□□□□□ -0.05
CRNKL1-204ENST00000490910 PRKRIP1Q9H875 184 aaPredicted RBP14.76□□□□□ -0.05
CRNKL1-204ENST00000490910 BRPF3Q9ULD4 1205 aa14.75□□□□□ -0.05
CRNKL1-204ENST00000490910 RCAN3Q9UKA8 241 aa14.74□□□□□ -0.05
CRNKL1-204ENST00000490910 NACADO15069 1562 aa14.74□□□□□ -0.05
CRNKL1-204ENST00000490910 TOP2AP11388 1531 aaKnown RBP14.73□□□□□ -0.05
CRNKL1-204ENST00000490910 UBE2Q2Q8WVN8 375 aa14.72□□□□□ -0.05
CRNKL1-204ENST00000490910 HSP90AA2PQ14568 343 aaPredicted RBP14.72□□□□□ -0.05
CRNKL1-204ENST00000490910 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
CRNKL1-204ENST00000490910 PKNOX2Q96KN3 472 aa14.71□□□□□ -0.05
CRNKL1-204ENST00000490910 ARID3CA6NKF2 412 aa14.7□□□□□ -0.06
CRNKL1-204ENST00000490910 WDR43Q15061 677 aaKnown RBP eCLIP14.7□□□□□ -0.06
CRNKL1-204ENST00000490910 MS4A1P11836 297 aa14.7□□□□□ -0.06
CRNKL1-204ENST00000490910 FHAD1B1AJZ9 1412 aa14.69□□□□□ -0.06
CRNKL1-204ENST00000490910 SLC4A3P48751 1232 aa14.69□□□□□ -0.06
CRNKL1-204ENST00000490910 KIF21BO75037 1637 aa14.68□□□□□ -0.06
CRNKL1-204ENST00000490910 NFKBIBQ15653 356 aa14.67□□□□□ -0.06
CRNKL1-204ENST00000490910 RRBP1Q9P2E9 1410 aaKnown RBP14.66□□□□□ -0.06
CRNKL1-204ENST00000490910 ARHGAP35Q9NRY4 1499 aa14.66□□□□□ -0.06
CRNKL1-204ENST00000490910 EXOC6Q8TAG9 804 aa14.66□□□□□ -0.06
CRNKL1-204ENST00000490910 KDM2AQ9Y2K7 1162 aa14.65□□□□□ -0.06
CRNKL1-204ENST00000490910 ARID4BQ4LE39 1312 aaPredicted RBP14.65□□□□□ -0.06
CRNKL1-204ENST00000490910 FRAT1Q92837 279 aaPredicted RBP14.65□□□□□ -0.06
CRNKL1-204ENST00000490910 WDR97A6NE52 1622 aa14.64□□□□□ -0.07
CRNKL1-204ENST00000490910 SLKQ9H2G2 1235 aaPredicted RBP14.63□□□□□ -0.07
CRNKL1-204ENST00000490910 RRP1P56182 461 aaKnown RBP14.63□□□□□ -0.07
CRNKL1-204ENST00000490910 GOLGA6L3A6NEY3 463 aa14.61□□□□□ -0.07
CRNKL1-204ENST00000490910 CARD11Q9BXL7 1154 aa14.61□□□□□ -0.07
CRNKL1-204ENST00000490910 TNNT2P45379 298 aaPredicted RBP14.6□□□□□ -0.07
CRNKL1-204ENST00000490910 ZNF777Q9ULD5 760 aaPredicted RBP14.6□□□□□ -0.07
CRNKL1-204ENST00000490910 FAM43AQ8N2R8 423 aa14.6□□□□□ -0.07
CRNKL1-204ENST00000490910 L3MBTL2Q969R5 705 aa14.6□□□□□ -0.07
CRNKL1-204ENST00000490910 WASHC2AQ641Q2 1341 aa14.59□□□□□ -0.07
CRNKL1-204ENST00000490910 GZF1Q9H116 711 aaPredicted RBP14.59□□□□□ -0.07
CRNKL1-204ENST00000490910 CNTLNQ9NXG0 1405 aa14.58□□□□□ -0.08
CRNKL1-204ENST00000490910 PDE3BQ13370 1112 aa14.58□□□□□ -0.08
CRNKL1-204ENST00000490910 GOLGA6L22H0YM25 854 aa14.58□□□□□ -0.08
CRNKL1-204ENST00000490910 FMN1Q68DA7 1419 aa14.57□□□□□ -0.08
CRNKL1-204ENST00000490910 AKNAQ7Z591 1439 aa14.56□□□□□ -0.08
CRNKL1-204ENST00000490910 FAM161AQ3B820 660 aa14.56□□□□□ -0.08
CRNKL1-204ENST00000490910 BACH2Q9BYV9 841 aa14.55□□□□□ -0.08
CRNKL1-204ENST00000490910 FOXD1Q16676 465 aa14.54□□□□□ -0.08
CRNKL1-204ENST00000490910 CCDC184Q52MB2 194 aa14.54□□□□□ -0.08
CRNKL1-204ENST00000490910 SMARCA2P51531 1590 aa14.53□□□□□ -0.08
CRNKL1-204ENST00000490910 RALBP1Q15311 655 aa14.53□□□□□ -0.08
CRNKL1-204ENST00000490910 SPRYD3Q8NCJ5 442 aa14.53□□□□□ -0.08
CRNKL1-204ENST00000490910 MPHOSPH9Q99550 1183 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms