RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
PRPF4B-207ENST00000490399 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
PRPF4B-207ENST00000490399 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
PRPF4B-207ENST00000490399 CCDC61Q9Y6R9 512 aa12.54□□□□□ -0.4
PRPF4B-207ENST00000490399 NUBP1P53384 320 aa12.52□□□□□ -0.41
PRPF4B-207ENST00000490399 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
PRPF4B-207ENST00000490399 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
PRPF4B-207ENST00000490399 MS4A3Q96HJ5 214 aa12.49□□□□□ -0.41
PRPF4B-207ENST00000490399 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
PRPF4B-207ENST00000490399 SPOCK2Q92563 424 aa12.42□□□□□ -0.42
PRPF4B-207ENST00000490399 FAM212AQ96EL1 285 aa12.42□□□□□ -0.42
PRPF4B-207ENST00000490399 MAP3K13O43283 966 aa12.39□□□□□ -0.43
PRPF4B-207ENST00000490399 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
PRPF4B-207ENST00000490399 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
PRPF4B-207ENST00000490399 LHX8Q68G74 356 aa12.31□□□□□ -0.44
PRPF4B-207ENST00000490399 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
PRPF4B-207ENST00000490399 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
PRPF4B-207ENST00000490399 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
PRPF4B-207ENST00000490399 ATMINO43313 823 aaPredicted RBP12.29□□□□□ -0.44
PRPF4B-207ENST00000490399 PYGBP11216 843 aa12.29□□□□□ -0.44
PRPF4B-207ENST00000490399 PKD2Q13563 968 aa12.28□□□□□ -0.44
PRPF4B-207ENST00000490399 BMP2KQ9NSY1 1161 aaPredicted RBP12.26□□□□□ -0.45
PRPF4B-207ENST00000490399 ATN1P54259 1190 aaPredicted RBP12.25□□□□□ -0.45
PRPF4B-207ENST00000490399 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
PRPF4B-207ENST00000490399 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
PRPF4B-207ENST00000490399 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
PRPF4B-207ENST00000490399 GSE1Q14687 1217 aa12.23□□□□□ -0.45
PRPF4B-207ENST00000490399 TIE1P35590 1138 aa12.22□□□□□ -0.45
PRPF4B-207ENST00000490399 TTLL13PA6NNM8 815 aa12.19□□□□□ -0.46
PRPF4B-207ENST00000490399 METRNQ9UJH8 293 aa12.19□□□□□ -0.46
PRPF4B-207ENST00000490399 SLC39A7Q92504 469 aa12.18□□□□□ -0.46
PRPF4B-207ENST00000490399 ECM2O94769 699 aaPredicted RBP12.16□□□□□ -0.46
PRPF4B-207ENST00000490399 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
PRPF4B-207ENST00000490399 POTEB2H3BUK9 544 aa12.14□□□□□ -0.47
PRPF4B-207ENST00000490399 C7P10643 843 aa12.14□□□□□ -0.47
PRPF4B-207ENST00000490399 TMEM106CQ9BVX2 250 aa12.12□□□□□ -0.47
PRPF4B-207ENST00000490399 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
PRPF4B-207ENST00000490399 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
PRPF4B-207ENST00000490399 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
PRPF4B-207ENST00000490399 ZNF467Q7Z7K2 595 aaPredicted RBP12.07□□□□□ -0.48
PRPF4B-207ENST00000490399 RGL2O15211 777 aa12.06□□□□□ -0.48
PRPF4B-207ENST00000490399 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
PRPF4B-207ENST00000490399 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
PRPF4B-207ENST00000490399 COLQQ9Y215 455 aaPredicted RBP12.02□□□□□ -0.49
PRPF4B-207ENST00000490399 SEC24BO95487 1268 aa12.01□□□□□ -0.49
PRPF4B-207ENST00000490399 POTEJP0CG39 1038 aa12.01□□□□□ -0.49
PRPF4B-207ENST00000490399 IER5LQ5T953 404 aa12□□□□□ -0.49
PRPF4B-207ENST00000490399 TRIM41Q8WV44 630 aa12□□□□□ -0.49
PRPF4B-207ENST00000490399 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
PRPF4B-207ENST00000490399 PSEN1P49768 467 aa11.97□□□□□ -0.49
PRPF4B-207ENST00000490399 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
PRPF4B-207ENST00000490399 PLCG2P16885 1265 aa11.92□□□□□ -0.5
PRPF4B-207ENST00000490399 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
PRPF4B-207ENST00000490399 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
PRPF4B-207ENST00000490399 RIOK3O14730 519 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-207ENST00000490399 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
PRPF4B-207ENST00000490399 SCUBE2Q9NQ36 999 aa11.88□□□□□ -0.51
PRPF4B-207ENST00000490399 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
PRPF4B-207ENST00000490399 OCEL1Q9H607 264 aa11.86□□□□□ -0.51
PRPF4B-207ENST00000490399 CABP2Q9NPB3 220 aa11.85□□□□□ -0.51
PRPF4B-207ENST00000490399 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
PRPF4B-207ENST00000490399 PDCD7Q8N8D1 485 aaKnown RBP11.8□□□□□ -0.52
PRPF4B-207ENST00000490399 VGFO15240 615 aaPredicted RBP11.79□□□□□ -0.52
PRPF4B-207ENST00000490399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.523e-16■■■■■ 50.9
PRPF4B-207ENST00000490399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.78□□□□□ -0.52
PRPF4B-207ENST00000490399 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
PRPF4B-207ENST00000490399 STK25O00506 426 aa11.75□□□□□ -0.53
PRPF4B-207ENST00000490399 HS6ST3Q8IZP7 471 aa11.74□□□□□ -0.53
PRPF4B-207ENST00000490399 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
PRPF4B-207ENST00000490399 EFCAB3Q8N7B9 438 aa11.73□□□□□ -0.53
PRPF4B-207ENST00000490399 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
PRPF4B-207ENST00000490399 ILDR1Q86SU0 546 aaPredicted RBP11.71□□□□□ -0.53
PRPF4B-207ENST00000490399 SLAIN1Q8ND83 568 aa11.71□□□□□ -0.53
PRPF4B-207ENST00000490399 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
PRPF4B-207ENST00000490399 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
PRPF4B-207ENST00000490399 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
PRPF4B-207ENST00000490399 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-207ENST00000490399 C3orf67Q6ZVT6 689 aa11.65□□□□□ -0.54
PRPF4B-207ENST00000490399 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
PRPF4B-207ENST00000490399 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-207ENST00000490399 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-207ENST00000490399 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-207ENST00000490399 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
PRPF4B-207ENST00000490399 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
PRPF4B-207ENST00000490399 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
PRPF4B-207ENST00000490399 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
PRPF4B-207ENST00000490399 BOLA1Q9Y3E2 137 aa11.6□□□□□ -0.55
PRPF4B-207ENST00000490399 POTEMA6NI47 508 aa11.59□□□□□ -0.55
PRPF4B-207ENST00000490399 G3V3G9 751 aa11.59□□□□□ -0.55
PRPF4B-207ENST00000490399 DNAJC5Q9H3Z4 198 aa11.59□□□□□ -0.55
PRPF4B-207ENST00000490399 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
PRPF4B-207ENST00000490399 SOX12O15370 315 aa11.58□□□□□ -0.56
PRPF4B-207ENST00000490399 MS4A4AQ96JQ5 239 aa11.57□□□□□ -0.56
PRPF4B-207ENST00000490399 POTEGQ6S5H5 508 aa11.56□□□□□ -0.56
PRPF4B-207ENST00000490399 SPRYD3Q8NCJ5 442 aa11.56□□□□□ -0.56
PRPF4B-207ENST00000490399 SLC24A1O60721 1099 aa11.55□□□□□ -0.56
PRPF4B-207ENST00000490399 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.57
PRPF4B-207ENST00000490399 MFRPQ9BY79 579 aa11.51□□□□□ -0.57
PRPF4B-207ENST00000490399 ST18O60284 1047 aa11.5□□□□□ -0.57
PRPF4B-207ENST00000490399 HAP1P54257 671 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms