RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 GSE1Q14687 1217 aa13.04□□□□□ -0.32
RAB4A-204ENST00000489342 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
RAB4A-204ENST00000489342 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
RAB4A-204ENST00000489342 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
RAB4A-204ENST00000489342 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
RAB4A-204ENST00000489342 CLCN6P51797 869 aa12.92□□□□□ -0.34
RAB4A-204ENST00000489342 PYGBP11216 843 aa12.91□□□□□ -0.34
RAB4A-204ENST00000489342 GABBR2O75899 941 aa12.89□□□□□ -0.35
RAB4A-204ENST00000489342 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
RAB4A-204ENST00000489342 KIF12Q96FN5 646 aa12.86□□□□□ -0.35
RAB4A-204ENST00000489342 MAP3K13O43283 966 aa12.85□□□□□ -0.35
RAB4A-204ENST00000489342 PCDHB13Q9Y5F0 798 aa12.84□□□□□ -0.35
RAB4A-204ENST00000489342 MS4A3Q96HJ5 214 aa12.82□□□□□ -0.36
RAB4A-204ENST00000489342 GALR2O43603 387 aaPredicted RBP12.81□□□□□ -0.36
RAB4A-204ENST00000489342 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
RAB4A-204ENST00000489342 SGIP1Q9BQI5 828 aa12.79□□□□□ -0.36
RAB4A-204ENST00000489342 CHRM1P11229 460 aaPredicted RBP12.78□□□□□ -0.36
RAB4A-204ENST00000489342 ZNF467Q7Z7K2 595 aaPredicted RBP12.75□□□□□ -0.37
RAB4A-204ENST00000489342 DCBLD2Q96PD2 775 aa12.75□□□□□ -0.37
RAB4A-204ENST00000489342 PKD2Q13563 968 aa12.74□□□□□ -0.37
RAB4A-204ENST00000489342 IFNL1Q8IU54 200 aa12.73□□□□□ -0.37
RAB4A-204ENST00000489342 PCDHB8Q9UN66 801 aa12.72□□□□□ -0.37
RAB4A-204ENST00000489342 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
RAB4A-204ENST00000489342 TRPC6Q9Y210 931 aa12.65□□□□□ -0.38
RAB4A-204ENST00000489342 RIOK3O14730 519 aaKnown RBP12.64□□□□□ -0.39
RAB4A-204ENST00000489342 TIE1P35590 1138 aa12.64□□□□□ -0.39
RAB4A-204ENST00000489342 TAOK2Q9UL54 1235 aa12.62□□□□□ -0.39
RAB4A-204ENST00000489342 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
RAB4A-204ENST00000489342 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
RAB4A-204ENST00000489342 RGL2O15211 777 aa12.6□□□□□ -0.39
RAB4A-204ENST00000489342 PSEN1P49768 467 aa12.6□□□□□ -0.39
RAB4A-204ENST00000489342 RNF25Q96BH1 459 aaPredicted RBP12.6□□□□□ -0.39
RAB4A-204ENST00000489342 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
RAB4A-204ENST00000489342 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
RAB4A-204ENST00000489342 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.4
RAB4A-204ENST00000489342 TTLL13PA6NNM8 815 aa12.57□□□□□ -0.4
RAB4A-204ENST00000489342 ATMINO43313 823 aaPredicted RBP12.57□□□□□ -0.4
RAB4A-204ENST00000489342 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
RAB4A-204ENST00000489342 ASTLQ6HA08 431 aaPredicted RBP12.56□□□□□ -0.4
RAB4A-204ENST00000489342 POTEIP0CG38 1075 aa12.55□□□□□ -0.4
RAB4A-204ENST00000489342 ATN1P54259 1190 aaPredicted RBP12.54□□□□□ -0.4
RAB4A-204ENST00000489342 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
RAB4A-204ENST00000489342 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
RAB4A-204ENST00000489342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.51□□□□□ -0.41
RAB4A-204ENST00000489342 ZFP91Q96JP5 570 aaPredicted RBP12.51□□□□□ -0.41
RAB4A-204ENST00000489342 STK25O00506 426 aa12.47□□□□□ -0.41
RAB4A-204ENST00000489342 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
RAB4A-204ENST00000489342 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
RAB4A-204ENST00000489342 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
RAB4A-204ENST00000489342 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
RAB4A-204ENST00000489342 STK24Q9Y6E0 443 aa12.45□□□□□ -0.42
RAB4A-204ENST00000489342 BCL11BQ9C0K0 894 aaPredicted RBP12.44□□□□□ -0.42
RAB4A-204ENST00000489342 C7P10643 843 aa12.42□□□□□ -0.42
RAB4A-204ENST00000489342 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
RAB4A-204ENST00000489342 SEC24BO95487 1268 aa12.41□□□□□ -0.42
RAB4A-204ENST00000489342 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
RAB4A-204ENST00000489342 IER5LQ5T953 404 aa12.39□□□□□ -0.43
RAB4A-204ENST00000489342 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
RAB4A-204ENST00000489342 PLCG2P16885 1265 aa12.35□□□□□ -0.43
RAB4A-204ENST00000489342 HS6ST3Q8IZP7 471 aa12.33□□□□□ -0.44
RAB4A-204ENST00000489342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.33□□□□□ -0.44
RAB4A-204ENST00000489342 SOX12O15370 315 aa12.29□□□□□ -0.44
RAB4A-204ENST00000489342 OCEL1Q9H607 264 aa12.29□□□□□ -0.44
RAB4A-204ENST00000489342 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
RAB4A-204ENST00000489342 COLQQ9Y215 455 aaPredicted RBP12.28□□□□□ -0.44
RAB4A-204ENST00000489342 POTEFA5A3E0 1075 aa12.24□□□□□ -0.45
RAB4A-204ENST00000489342 PHF8Q9UPP1 1060 aa12.24□□□□□ -0.45
RAB4A-204ENST00000489342 NLRP6P59044 892 aa12.23□□□□□ -0.45
RAB4A-204ENST00000489342 LHX8Q68G74 356 aa12.23□□□□□ -0.45
RAB4A-204ENST00000489342 G3V3G9 751 aa12.2□□□□□ -0.46
RAB4A-204ENST00000489342 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
RAB4A-204ENST00000489342 MFRPQ9BY79 579 aa12.18□□□□□ -0.46
RAB4A-204ENST00000489342 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
RAB4A-204ENST00000489342 L3MBTL3Q96JM7 780 aaPredicted RBP12.17□□□□□ -0.46
RAB4A-204ENST00000489342 DPY19L2Q6NUT2 758 aa12.15□□□□□ -0.46
RAB4A-204ENST00000489342 ILDR1Q86SU0 546 aaPredicted RBP12.15□□□□□ -0.46
RAB4A-204ENST00000489342 DNAJC5Q9H3Z4 198 aa12.15□□□□□ -0.46
RAB4A-204ENST00000489342 RYDENQ9NUL5 291 aaKnown RBP12.14□□□□□ -0.47
RAB4A-204ENST00000489342 MAMSTRQ6ZN01 415 aa12.13□□□□□ -0.47
RAB4A-204ENST00000489342 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
RAB4A-204ENST00000489342 BBXQ8WY36 941 aaPredicted RBP12.13□□□□□ -0.47
RAB4A-204ENST00000489342 SCUBE2Q9NQ36 999 aa12.13□□□□□ -0.47
RAB4A-204ENST00000489342 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.13□□□□□ -0.47
RAB4A-204ENST00000489342 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
RAB4A-204ENST00000489342 MS4A4AQ96JQ5 239 aa12.11□□□□□ -0.47
RAB4A-204ENST00000489342 BOLA1Q9Y3E2 137 aa12.11□□□□□ -0.47
RAB4A-204ENST00000489342 C3orf67Q6ZVT6 689 aa12.09□□□□□ -0.47
RAB4A-204ENST00000489342 POTEJP0CG39 1038 aa12.07□□□□□ -0.48
RAB4A-204ENST00000489342 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.06□□□□□ -0.48
RAB4A-204ENST00000489342 MICALL2Q8IY33 904 aa12.02□□□□□ -0.49
RAB4A-204ENST00000489342 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
RAB4A-204ENST00000489342 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
RAB4A-204ENST00000489342 PPP1R37O75864 691 aa12.01□□□□□ -0.49
RAB4A-204ENST00000489342 SPRYD3Q8NCJ5 442 aa12.01□□□□□ -0.49
RAB4A-204ENST00000489342 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
RAB4A-204ENST00000489342 PAXIP1Q6ZW49 1069 aaPredicted RBP11.99□□□□□ -0.49
RAB4A-204ENST00000489342 SLAIN1Q8ND83 568 aa11.98□□□□□ -0.49
RAB4A-204ENST00000489342 TMEM121BQ9BXQ6 578 aaPredicted RBP11.97□□□□□ -0.49
RAB4A-204ENST00000489342 TMC2Q8TDI7 906 aa11.87□□□□□ -0.51
RAB4A-204ENST00000489342 NISCHQ9Y2I1 1504 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms