RNA–Protein interactions for RNA: ENST00000487947.6

PDCD10-214, Transcript of programmed cell death 10, humanhuman

TSL 5 BASIC

Gene PDCD10, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-214ENST00000487947 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
PDCD10-214ENST00000487947 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
PDCD10-214ENST00000487947 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
PDCD10-214ENST00000487947 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
PDCD10-214ENST00000487947 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
PDCD10-214ENST00000487947 MS4A3Q96HJ5 214 aa13.14□□□□□ -0.31
PDCD10-214ENST00000487947 KIF12Q96FN5 646 aa13.13□□□□□ -0.31
PDCD10-214ENST00000487947 DCAF8Q5TAQ9 597 aa13.11□□□□□ -0.31
PDCD10-214ENST00000487947 DCBLD2Q96PD2 775 aa13.11□□□□□ -0.31
PDCD10-214ENST00000487947 MAP3K13O43283 966 aa13.09□□□□□ -0.31
PDCD10-214ENST00000487947 SPOCK2Q92563 424 aa13.05□□□□□ -0.32
PDCD10-214ENST00000487947 PYGBP11216 843 aa13□□□□□ -0.33
PDCD10-214ENST00000487947 TRPC6Q9Y210 931 aa13□□□□□ -0.33
PDCD10-214ENST00000487947 GSE1Q14687 1217 aa12.99□□□□□ -0.33
PDCD10-214ENST00000487947 PCDHB13Q9Y5F0 798 aa12.99□□□□□ -0.33
PDCD10-214ENST00000487947 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
PDCD10-214ENST00000487947 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
PDCD10-214ENST00000487947 ATMINO43313 823 aaPredicted RBP12.94□□□□□ -0.34
PDCD10-214ENST00000487947 ASTLQ6HA08 431 aaPredicted RBP12.94□□□□□ -0.34
PDCD10-214ENST00000487947 IFNL1Q8IU54 200 aa12.94□□□□□ -0.34
PDCD10-214ENST00000487947 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
PDCD10-214ENST00000487947 BMP2KQ9NSY1 1161 aaPredicted RBP12.91□□□□□ -0.34
PDCD10-214ENST00000487947 TIE1P35590 1138 aa12.89□□□□□ -0.35
PDCD10-214ENST00000487947 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
PDCD10-214ENST00000487947 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
PDCD10-214ENST00000487947 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
PDCD10-214ENST00000487947 LHX8Q68G74 356 aa12.85□□□□□ -0.35
PDCD10-214ENST00000487947 TTLL13PA6NNM8 815 aa12.84□□□□□ -0.35
PDCD10-214ENST00000487947 SLC39A7Q92504 469 aa12.79□□□□□ -0.36
PDCD10-214ENST00000487947 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
PDCD10-214ENST00000487947 METRNQ9UJH8 293 aa12.79□□□□□ -0.36
PDCD10-214ENST00000487947 C7P10643 843 aa12.77□□□□□ -0.37
PDCD10-214ENST00000487947 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
PDCD10-214ENST00000487947 TRIM35Q9UPQ4 493 aa12.76□□□□□ -0.37
PDCD10-214ENST00000487947 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
PDCD10-214ENST00000487947 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
PDCD10-214ENST00000487947 POTEFA5A3E0 1075 aa12.7□□□□□ -0.38
PDCD10-214ENST00000487947 PSEN1P49768 467 aa12.68□□□□□ -0.38
PDCD10-214ENST00000487947 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
PDCD10-214ENST00000487947 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
PDCD10-214ENST00000487947 IER5LQ5T953 404 aa12.65□□□□□ -0.38
PDCD10-214ENST00000487947 SEC24BO95487 1268 aa12.63□□□□□ -0.39
PDCD10-214ENST00000487947 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
PDCD10-214ENST00000487947 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
PDCD10-214ENST00000487947 PKD2Q13563 968 aa12.59□□□□□ -0.39
PDCD10-214ENST00000487947 OTUD5Q96G74 571 aa12.59□□□□□ -0.39
PDCD10-214ENST00000487947 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
PDCD10-214ENST00000487947 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
PDCD10-214ENST00000487947 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
PDCD10-214ENST00000487947 GOLGA2Q08379 1002 aa12.55□□□□□ -0.4
PDCD10-214ENST00000487947 PLCG2P16885 1265 aa12.54□□□□□ -0.4
PDCD10-214ENST00000487947 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
PDCD10-214ENST00000487947 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
PDCD10-214ENST00000487947 OCEL1Q9H607 264 aa12.52□□□□□ -0.41
PDCD10-214ENST00000487947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
PDCD10-214ENST00000487947 VGFO15240 615 aaPredicted RBP12.5□□□□□ -0.41
PDCD10-214ENST00000487947 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
PDCD10-214ENST00000487947 MAMSTRQ6ZN01 415 aa12.48□□□□□ -0.41
PDCD10-214ENST00000487947 RGL2O15211 777 aa12.47□□□□□ -0.41
PDCD10-214ENST00000487947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.412e-6■■■□□ 14.8
PDCD10-214ENST00000487947 PDCD7Q8N8D1 485 aaKnown RBP12.45□□□□□ -0.42
PDCD10-214ENST00000487947 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
PDCD10-214ENST00000487947 EFCAB3Q8N7B9 438 aa12.43□□□□□ -0.42
PDCD10-214ENST00000487947 ILDR1Q86SU0 546 aaPredicted RBP12.4□□□□□ -0.42
PDCD10-214ENST00000487947 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
PDCD10-214ENST00000487947 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
PDCD10-214ENST00000487947 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
PDCD10-214ENST00000487947 STK24Q9Y6E0 443 aa12.36□□□□□ -0.43
PDCD10-214ENST00000487947 STK25O00506 426 aa12.34□□□□□ -0.43
PDCD10-214ENST00000487947 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
PDCD10-214ENST00000487947 SOX12O15370 315 aa12.31□□□□□ -0.44
PDCD10-214ENST00000487947 SLAIN1Q8ND83 568 aa12.3□□□□□ -0.44
PDCD10-214ENST00000487947 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
PDCD10-214ENST00000487947 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.27□□□□□ -0.45
PDCD10-214ENST00000487947 MS4A4AQ96JQ5 239 aa12.26□□□□□ -0.45
PDCD10-214ENST00000487947 BOLA1Q9Y3E2 137 aa12.25□□□□□ -0.45
PDCD10-214ENST00000487947 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
PDCD10-214ENST00000487947 MFRPQ9BY79 579 aa12.22□□□□□ -0.45
PDCD10-214ENST00000487947 G3V3G9 751 aa12.21□□□□□ -0.45
PDCD10-214ENST00000487947 NLRP6P59044 892 aa12.21□□□□□ -0.45
PDCD10-214ENST00000487947 FBXO22Q8NEZ5 403 aa12.21□□□□□ -0.45
PDCD10-214ENST00000487947 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
PDCD10-214ENST00000487947 CHGAP10645 457 aaKnown RBP12.17□□□□□ -0.46
PDCD10-214ENST00000487947 HS6ST3Q8IZP7 471 aa12.17□□□□□ -0.46
PDCD10-214ENST00000487947 TMEM121BQ9BXQ6 578 aaPredicted RBP12.17□□□□□ -0.46
PDCD10-214ENST00000487947 LCE2DQ5TA82 110 aaPredicted RBP12.16□□□□□ -0.46
PDCD10-214ENST00000487947 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
PDCD10-214ENST00000487947 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
PDCD10-214ENST00000487947 POTEMA6NI47 508 aa12.07□□□□□ -0.48
PDCD10-214ENST00000487947 TMEM92Q6UXU6 159 aa12.07□□□□□ -0.48
PDCD10-214ENST00000487947 ST18O60284 1047 aa12.06□□□□□ -0.48
PDCD10-214ENST00000487947 PPP1R37O75864 691 aa12.06□□□□□ -0.48
PDCD10-214ENST00000487947 POTEGQ6S5H5 508 aa12.06□□□□□ -0.48
PDCD10-214ENST00000487947 SNPHO15079 494 aa12.05□□□□□ -0.48
PDCD10-214ENST00000487947 NKX1-1Q15270 411 aaPredicted RBP12.05□□□□□ -0.48
PDCD10-214ENST00000487947 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
PDCD10-214ENST00000487947 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
PDCD10-214ENST00000487947 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
PDCD10-214ENST00000487947 HOXB3P14651 431 aaPredicted RBP11.97□□□□□ -0.49
PDCD10-214ENST00000487947 C2orf72A6NCS6 295 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms