RNA–Protein interactions for RNA: ENST00000487678.1

PDCD10-213, Transcript of programmed cell death 10, humanhuman

TSL 3

Gene PDCD10, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-213ENST00000487678 POTEB2H3BUK9 544 aa18.38■□□□□ 0.53
PDCD10-213ENST00000487678 PLCD3Q8N3E9 789 aa18.31■□□□□ 0.52
PDCD10-213ENST00000487678 KIF12Q96FN5 646 aa18.31■□□□□ 0.52
PDCD10-213ENST00000487678 ATMINO43313 823 aaPredicted RBP18.28■□□□□ 0.52
PDCD10-213ENST00000487678 ASTLQ6HA08 431 aaPredicted RBP18.28■□□□□ 0.52
PDCD10-213ENST00000487678 TRPC6Q9Y210 931 aa18.28■□□□□ 0.52
PDCD10-213ENST00000487678 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
PDCD10-213ENST00000487678 OTUD5Q96G74 571 aa18.23■□□□□ 0.51
PDCD10-213ENST00000487678 MAP3K13O43283 966 aa18.22■□□□□ 0.51
PDCD10-213ENST00000487678 NUBP1P53384 320 aa18.19■□□□□ 0.5
PDCD10-213ENST00000487678 ATN1P54259 1190 aaPredicted RBP18.17■□□□□ 0.5
PDCD10-213ENST00000487678 METRNQ9UJH8 293 aa18.17■□□□□ 0.5
PDCD10-213ENST00000487678 POTEJP0CG39 1038 aa18.13■□□□□ 0.49
PDCD10-213ENST00000487678 BMP2KQ9NSY1 1161 aaPredicted RBP18.13■□□□□ 0.49
PDCD10-213ENST00000487678 SLC39A7Q92504 469 aa18.08■□□□□ 0.48
PDCD10-213ENST00000487678 C7P10643 843 aa18.05■□□□□ 0.48
PDCD10-213ENST00000487678 POTEFA5A3E0 1075 aa18.03■□□□□ 0.48
PDCD10-213ENST00000487678 ZBTB47Q9UFB7 747 aaPredicted RBP18.02■□□□□ 0.48
PDCD10-213ENST00000487678 PCDHB13Q9Y5F0 798 aa17.98■□□□□ 0.47
PDCD10-213ENST00000487678 TTLL13PA6NNM8 815 aa17.97■□□□□ 0.47
PDCD10-213ENST00000487678 TIE1P35590 1138 aa17.97■□□□□ 0.47
PDCD10-213ENST00000487678 IFNL1Q8IU54 200 aa17.95■□□□□ 0.46
PDCD10-213ENST00000487678 FAM212AQ96EL1 285 aa17.93■□□□□ 0.46
PDCD10-213ENST00000487678 FBXO3Q9UK99 471 aa17.9■□□□□ 0.46
PDCD10-213ENST00000487678 COLQQ9Y215 455 aaPredicted RBP17.9■□□□□ 0.46
PDCD10-213ENST00000487678 SGIP1Q9BQI5 828 aa17.87■□□□□ 0.45
PDCD10-213ENST00000487678 DCAF8Q5TAQ9 597 aa17.85■□□□□ 0.45
PDCD10-213ENST00000487678 PYGBP11216 843 aa17.84■□□□□ 0.45
PDCD10-213ENST00000487678 VASPP50552 380 aaPredicted RBP17.84■□□□□ 0.45
PDCD10-213ENST00000487678 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
PDCD10-213ENST00000487678 TMEM106CQ9BVX2 250 aa17.78■□□□□ 0.44
PDCD10-213ENST00000487678 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
PDCD10-213ENST00000487678 PCDHB8Q9UN66 801 aa17.74■□□□□ 0.43
PDCD10-213ENST00000487678 SEC24BO95487 1268 aa17.73■□□□□ 0.43
PDCD10-213ENST00000487678 MAMSTRQ6ZN01 415 aa17.72■□□□□ 0.43
PDCD10-213ENST00000487678 LCE2DQ5TA82 110 aaPredicted RBP17.68■□□□□ 0.42
PDCD10-213ENST00000487678 SCUBE2Q9NQ36 999 aa17.68■□□□□ 0.42
PDCD10-213ENST00000487678 POTEMA6NI47 508 aa17.67■□□□□ 0.42
PDCD10-213ENST00000487678 IER5LQ5T953 404 aa17.66■□□□□ 0.42
PDCD10-213ENST00000487678 POTEGQ6S5H5 508 aa17.63■□□□□ 0.41
PDCD10-213ENST00000487678 IFNLR1Q8IU57 520 aaPredicted RBP17.61■□□□□ 0.41
PDCD10-213ENST00000487678 IRX5P78411 483 aaPredicted RBP17.58■□□□□ 0.4
PDCD10-213ENST00000487678 FAM163AQ96GL9 167 aaPredicted RBP17.57■□□□□ 0.4
PDCD10-213ENST00000487678 PLSCR2Q9NRY7 297 aa17.57■□□□□ 0.4
PDCD10-213ENST00000487678 GSE1Q14687 1217 aa17.54■□□□□ 0.4
PDCD10-213ENST00000487678 PLCG2P16885 1265 aa17.51■□□□□ 0.39
PDCD10-213ENST00000487678 CHRM1P11229 460 aaPredicted RBP17.45■□□□□ 0.38
PDCD10-213ENST00000487678 SPOCK2Q92563 424 aa17.43■□□□□ 0.38
PDCD10-213ENST00000487678 OCEL1Q9H607 264 aa17.43■□□□□ 0.38
PDCD10-213ENST00000487678 ZNF467Q7Z7K2 595 aaPredicted RBP17.41■□□□□ 0.38
PDCD10-213ENST00000487678 SLAIN1Q8ND83 568 aa17.41■□□□□ 0.38
PDCD10-213ENST00000487678 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
PDCD10-213ENST00000487678 PSEN1P49768 467 aa17.37■□□□□ 0.37
PDCD10-213ENST00000487678 PDCD7Q8N8D1 485 aaKnown RBP17.36■□□□□ 0.37
PDCD10-213ENST00000487678 ST18O60284 1047 aa17.26■□□□□ 0.35
PDCD10-213ENST00000487678 MKRN3Q13064 507 aaKnown RBP17.26■□□□□ 0.35
PDCD10-213ENST00000487678 PDAP1Q13442 181 aaKnown RBP17.24■□□□□ 0.35
PDCD10-213ENST00000487678 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
PDCD10-213ENST00000487678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.22■□□□□ 0.355e-6■■□□□ 14.3
PDCD10-213ENST00000487678 DPY19L2Q6NUT2 758 aa17.21■□□□□ 0.35
PDCD10-213ENST00000487678 CABP2Q9NPB3 220 aa17.19■□□□□ 0.34
PDCD10-213ENST00000487678 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.18■□□□□ 0.34
PDCD10-213ENST00000487678 PCDH10Q9P2E7 1040 aa17.16■□□□□ 0.34
PDCD10-213ENST00000487678 ILDR1Q86SU0 546 aaPredicted RBP17.15■□□□□ 0.34
PDCD10-213ENST00000487678 CDAN1Q8IWY9 1227 aa17.09■□□□□ 0.33
PDCD10-213ENST00000487678 L3MBTL3Q96JM7 780 aaPredicted RBP17.07■□□□□ 0.32
PDCD10-213ENST00000487678 C3orf67Q6ZVT6 689 aa17.06■□□□□ 0.32
PDCD10-213ENST00000487678 RNF25Q96BH1 459 aaPredicted RBP17.05■□□□□ 0.32
PDCD10-213ENST00000487678 MARVELD3Q96A59 401 aa17.02■□□□□ 0.32
PDCD10-213ENST00000487678 EFCAB3Q8N7B9 438 aa17.01■□□□□ 0.31
PDCD10-213ENST00000487678 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
PDCD10-213ENST00000487678 BOLA1Q9Y3E2 137 aa16.95■□□□□ 0.3
PDCD10-213ENST00000487678 SNPHO15079 494 aa16.94■□□□□ 0.3
PDCD10-213ENST00000487678 TMEM121BQ9BXQ6 578 aaPredicted RBP16.91■□□□□ 0.3
PDCD10-213ENST00000487678 RIOK3O14730 519 aaKnown RBP16.9■□□□□ 0.3
PDCD10-213ENST00000487678 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.89■□□□□ 0.29
PDCD10-213ENST00000487678 ZFP91Q96JP5 570 aaPredicted RBP16.89■□□□□ 0.29
PDCD10-213ENST00000487678 POTEB3A0JP26 581 aa16.85■□□□□ 0.29
PDCD10-213ENST00000487678 POTEBQ6S5H4 581 aa16.85■□□□□ 0.29
PDCD10-213ENST00000487678 MS4A4AQ96JQ5 239 aa16.83■□□□□ 0.28
PDCD10-213ENST00000487678 HOXB3P14651 431 aaPredicted RBP16.82■□□□□ 0.28
PDCD10-213ENST00000487678 G3V3G9 751 aa16.8■□□□□ 0.28
PDCD10-213ENST00000487678 EMP3P54852 163 aa16.79■□□□□ 0.28
PDCD10-213ENST00000487678 PHF8Q9UPP1 1060 aa16.79■□□□□ 0.28
PDCD10-213ENST00000487678 TMEM92Q6UXU6 159 aa16.78■□□□□ 0.28
PDCD10-213ENST00000487678 VGFO15240 615 aaPredicted RBP16.77■□□□□ 0.28
PDCD10-213ENST00000487678 MICALL2Q8IY33 904 aa16.74■□□□□ 0.27
PDCD10-213ENST00000487678 FAM205CA6NFA0 338 aa16.72■□□□□ 0.27
PDCD10-213ENST00000487678 SOX12O15370 315 aa16.71■□□□□ 0.27
PDCD10-213ENST00000487678 HS3ST6Q96QI5 342 aa16.71■□□□□ 0.27
PDCD10-213ENST00000487678 SPNS2Q8IVW8 549 aa16.69■□□□□ 0.26
PDCD10-213ENST00000487678 BCL11BQ9C0K0 894 aaPredicted RBP16.68■□□□□ 0.26
PDCD10-213ENST00000487678 KRTAP3-3Q9BYR6 98 aa16.66■□□□□ 0.26
PDCD10-213ENST00000487678 KRTAP3-2Q9BYR7 98 aa16.66■□□□□ 0.26
PDCD10-213ENST00000487678 MMRN1Q13201 1228 aa16.63■□□□□ 0.25
PDCD10-213ENST00000487678 PKD2Q13563 968 aa16.62■□□□□ 0.25
PDCD10-213ENST00000487678 FBXO22Q8NEZ5 403 aa16.62■□□□□ 0.25
PDCD10-213ENST00000487678 STK24Q9Y6E0 443 aa16.61■□□□□ 0.25
PDCD10-213ENST00000487678 ECM2O94769 699 aaPredicted RBP16.6■□□□□ 0.25
PDCD10-213ENST00000487678 HOXB1P14653 301 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms