RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 IRX6P78412 446 aaPredicted RBP18.66■□□□□ 0.58
TFAM-204ENST00000487519 RGL3Q3MIN7 710 aa18.66■□□□□ 0.58
TFAM-204ENST00000487519 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
TFAM-204ENST00000487519 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
TFAM-204ENST00000487519 EIF4G2P78344 907 aaKnown RBP eCLIP18.62■□□□□ 0.57
TFAM-204ENST00000487519 ARXQ96QS3 562 aa18.6■□□□□ 0.57
TFAM-204ENST00000487519 SENP3-EIF4A1A0A087X0R7 540 aa18.6■□□□□ 0.57
TFAM-204ENST00000487519 MIER1Q8N108 512 aa18.58■□□□□ 0.57
TFAM-204ENST00000487519 ARID4BQ4LE39 1312 aaPredicted RBP18.57■□□□□ 0.56
TFAM-204ENST00000487519 EIF5BO60841 1220 aaKnown RBP18.56■□□□□ 0.56
TFAM-204ENST00000487519 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
TFAM-204ENST00000487519 NBR1Q14596 966 aa18.55■□□□□ 0.56
TFAM-204ENST00000487519 CFDP1Q9UEE9 299 aaPredicted RBP18.52■□□□□ 0.55
TFAM-204ENST00000487519 PPM1GO15355 546 aaPredicted RBP18.5■□□□□ 0.55
TFAM-204ENST00000487519 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
TFAM-204ENST00000487519 HAP1P54257 671 aaPredicted RBP18.48■□□□□ 0.55
TFAM-204ENST00000487519 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
TFAM-204ENST00000487519 GOLGA3Q08378 1498 aa18.42■□□□□ 0.54
TFAM-204ENST00000487519 KNSTRNQ9Y448 316 aa18.42■□□□□ 0.54
TFAM-204ENST00000487519 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
TFAM-204ENST00000487519 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
TFAM-204ENST00000487519 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
TFAM-204ENST00000487519 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
TFAM-204ENST00000487519 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
TFAM-204ENST00000487519 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
TFAM-204ENST00000487519 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
TFAM-204ENST00000487519 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
TFAM-204ENST00000487519 EEA1Q15075 1411 aa18.34■□□□□ 0.53
TFAM-204ENST00000487519 KIF27Q86VH2 1401 aa18.34■□□□□ 0.53
TFAM-204ENST00000487519 POGKQ9P215 609 aa18.34■□□□□ 0.53
TFAM-204ENST00000487519 LAS1LQ9Y4W2 734 aaKnown RBP18.34■□□□□ 0.53
TFAM-204ENST00000487519 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.53
TFAM-204ENST00000487519 SIN3AQ96ST3 1273 aa18.32■□□□□ 0.52
TFAM-204ENST00000487519 FTSJ3Q8IY81 847 aaKnown RBP18.28■□□□□ 0.52
TFAM-204ENST00000487519 ERCC6Q03468 1493 aa18.28■□□□□ 0.52
TFAM-204ENST00000487519 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
TFAM-204ENST00000487519 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
TFAM-204ENST00000487519 CDK11BP21127 795 aaKnown RBP18.26■□□□□ 0.51
TFAM-204ENST00000487519 BECN1Q14457 450 aa18.25■□□□□ 0.51
TFAM-204ENST00000487519 CCDC180Q9P1Z9 1646 aa18.25■□□□□ 0.51
TFAM-204ENST00000487519 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
TFAM-204ENST00000487519 MLECQ14165 292 aa18.24■□□□□ 0.51
TFAM-204ENST00000487519 CC2D1BQ5T0F9 858 aaKnown RBP18.24■□□□□ 0.51
TFAM-204ENST00000487519 NUDCQ9Y266 331 aa18.23■□□□□ 0.51
TFAM-204ENST00000487519 TPRNQ4KMQ1 711 aa18.23■□□□□ 0.51
TFAM-204ENST00000487519 NCLP19338 710 aaKnown RBP18.22■□□□□ 0.51
TFAM-204ENST00000487519 FRAT1Q92837 279 aaPredicted RBP18.22■□□□□ 0.51
TFAM-204ENST00000487519 U2SURPO15042 1029 aaKnown RBP18.21■□□□□ 0.51
TFAM-204ENST00000487519 TNIKQ9UKE5 1360 aa18.21■□□□□ 0.51
TFAM-204ENST00000487519 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.51
TFAM-204ENST00000487519 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
TFAM-204ENST00000487519 SOX12O15370 315 aa18.19■□□□□ 0.5
TFAM-204ENST00000487519 CCNB3Q8WWL7 1395 aa18.19■□□□□ 0.5
TFAM-204ENST00000487519 DDRGK1Q96HY6 314 aa18.18■□□□□ 0.5
TFAM-204ENST00000487519 DCAF11Q8TEB1 546 aa18.18■□□□□ 0.5
TFAM-204ENST00000487519 RGS3P49796 1198 aa18.17■□□□□ 0.5
TFAM-204ENST00000487519 GOLGA6L22H0YM25 854 aa18.16■□□□□ 0.5
TFAM-204ENST00000487519 NPHP1O15259 732 aa18.16■□□□□ 0.5
TFAM-204ENST00000487519 TAOK2Q9UL54 1235 aa18.16■□□□□ 0.5
TFAM-204ENST00000487519 SAFB2Q14151 953 aaKnown RBP eCLIP18.15■□□□□ 0.5
TFAM-204ENST00000487519 CASC1Q6TDU7 716 aa18.15■□□□□ 0.5
TFAM-204ENST00000487519 TULP1O00294 542 aaPredicted RBP18.12■□□□□ 0.49
TFAM-204ENST00000487519 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
TFAM-204ENST00000487519 ZRSR1Q15695 479 aaKnown RBP18.1■□□□□ 0.49
TFAM-204ENST00000487519 SRPK2P78362 688 aaKnown RBP18.1■□□□□ 0.49
TFAM-204ENST00000487519 TRIM44Q96DX7 344 aaPredicted RBP18.1■□□□□ 0.49
TFAM-204ENST00000487519 OS9Q13438 667 aaPredicted RBP18.1■□□□□ 0.49
TFAM-204ENST00000487519 GGT6Q6P531 493 aa18.09■□□□□ 0.49
TFAM-204ENST00000487519 TMF1P82094 1093 aa18.09■□□□□ 0.49
TFAM-204ENST00000487519 CARMIL1Q5VZK9 1371 aa18.08■□□□□ 0.49
TFAM-204ENST00000487519 NACADO15069 1562 aa18.07■□□□□ 0.48
TFAM-204ENST00000487519 CUX2O14529 1486 aa18.06■□□□□ 0.48
TFAM-204ENST00000487519 KANK1Q14678 1352 aa18.06■□□□□ 0.48
TFAM-204ENST00000487519 GLIPR1L2Q4G1C9 344 aa18.05■□□□□ 0.48
TFAM-204ENST00000487519 STK26Q9P289 416 aa18.04■□□□□ 0.48
TFAM-204ENST00000487519 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
TFAM-204ENST00000487519 PTMAP06454 111 aaKnown RBP18.04■□□□□ 0.48
TFAM-204ENST00000487519 ANP32EQ9BTT0 268 aa18.03■□□□□ 0.48
TFAM-204ENST00000487519 FGD1P98174 961 aa18.02■□□□□ 0.48
TFAM-204ENST00000487519 MORC1Q86VD1 984 aa18.01■□□□□ 0.47
TFAM-204ENST00000487519 FOXD1Q16676 465 aa18.01■□□□□ 0.47
TFAM-204ENST00000487519 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
TFAM-204ENST00000487519 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
TFAM-204ENST00000487519 KCNJ4P48050 445 aa18.01■□□□□ 0.47
TFAM-204ENST00000487519 HDGFP51858 240 aaKnown RBP18.01■□□□□ 0.47
TFAM-204ENST00000487519 SOGA1O94964 1423 aa18■□□□□ 0.47
TFAM-204ENST00000487519 B4GALNT3Q6L9W6 998 aa18■□□□□ 0.47
TFAM-204ENST00000487519 NAP1L2Q9ULW6 460 aaPredicted RBP18■□□□□ 0.47
TFAM-204ENST00000487519 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
TFAM-204ENST00000487519 PKD2Q13563 968 aa17.98■□□□□ 0.47
TFAM-204ENST00000487519 GOLGA2Q08379 1002 aa17.97■□□□□ 0.47
TFAM-204ENST00000487519 CHMP4BQ9H444 224 aaKnown RBP17.97■□□□□ 0.47
TFAM-204ENST00000487519 MS4A1P11836 297 aa17.97■□□□□ 0.47
TFAM-204ENST00000487519 PLCB2Q00722 1185 aa17.97■□□□□ 0.47
TFAM-204ENST00000487519 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
TFAM-204ENST00000487519 HSP90AB1P08238 724 aaKnown RBP17.94■□□□□ 0.46
TFAM-204ENST00000487519 DNTTIP2Q5QJE6 756 aaKnown RBP17.93■□□□□ 0.46
TFAM-204ENST00000487519 HSPA5P11021 654 aaKnown RBP17.93■□□□□ 0.46
TFAM-204ENST00000487519 PAK3O75914 559 aaPredicted RBP17.92■□□□□ 0.46
TFAM-204ENST00000487519 KANK4Q5T7N3 995 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms