RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
COMMD6-211ENST00000486516 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
COMMD6-211ENST00000486516 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
COMMD6-211ENST00000486516 C7P10643 843 aa11.93□□□□□ -0.5
COMMD6-211ENST00000486516 FAM163AQ96GL9 167 aaPredicted RBP11.92□□□□□ -0.5
COMMD6-211ENST00000486516 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
COMMD6-211ENST00000486516 CSRNP3Q8WYN3 585 aa11.91□□□□□ -0.5
COMMD6-211ENST00000486516 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
COMMD6-211ENST00000486516 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
COMMD6-211ENST00000486516 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
COMMD6-211ENST00000486516 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
COMMD6-211ENST00000486516 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
COMMD6-211ENST00000486516 TRPC6Q9Y210 931 aa11.81□□□□□ -0.52
COMMD6-211ENST00000486516 CCDC61Q9Y6R9 512 aa11.78□□□□□ -0.52
COMMD6-211ENST00000486516 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
COMMD6-211ENST00000486516 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
COMMD6-211ENST00000486516 COLQQ9Y215 455 aaPredicted RBP11.7□□□□□ -0.54
COMMD6-211ENST00000486516 CDAN1Q8IWY9 1227 aa11.68□□□□□ -0.54
COMMD6-211ENST00000486516 MAP3K13O43283 966 aa11.67□□□□□ -0.54
COMMD6-211ENST00000486516 TIE1P35590 1138 aa11.62□□□□□ -0.55
COMMD6-211ENST00000486516 TTLL13PA6NNM8 815 aa11.6□□□□□ -0.55
COMMD6-211ENST00000486516 SEC24BO95487 1268 aa11.59□□□□□ -0.55
COMMD6-211ENST00000486516 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
COMMD6-211ENST00000486516 PROM2Q8N271 834 aa11.56□□□□□ -0.56
COMMD6-211ENST00000486516 ST18O60284 1047 aa11.54□□□□□ -0.56
COMMD6-211ENST00000486516 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
COMMD6-211ENST00000486516 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
COMMD6-211ENST00000486516 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
COMMD6-211ENST00000486516 MIER1Q8N108 512 aa11.47□□□□□ -0.57
COMMD6-211ENST00000486516 IER5LQ5T953 404 aa11.45□□□□□ -0.58
COMMD6-211ENST00000486516 PCDHB13Q9Y5F0 798 aa11.45□□□□□ -0.58
COMMD6-211ENST00000486516 MMRN1Q13201 1228 aa11.42□□□□□ -0.58
COMMD6-211ENST00000486516 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
COMMD6-211ENST00000486516 SPNS2Q8IVW8 549 aa11.4□□□□□ -0.58
COMMD6-211ENST00000486516 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
COMMD6-211ENST00000486516 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
COMMD6-211ENST00000486516 SGIP1Q9BQI5 828 aa11.36□□□□□ -0.59
COMMD6-211ENST00000486516 PLCG2P16885 1265 aa11.35□□□□□ -0.59
COMMD6-211ENST00000486516 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
COMMD6-211ENST00000486516 MARVELD3Q96A59 401 aa11.33□□□□□ -0.6
COMMD6-211ENST00000486516 NUBP1P53384 320 aa11.32□□□□□ -0.6
COMMD6-211ENST00000486516 PLCD3Q8N3E9 789 aa11.3□□□□□ -0.6
COMMD6-211ENST00000486516 TMEM121BQ9BXQ6 578 aaPredicted RBP11.26□□□□□ -0.61
COMMD6-211ENST00000486516 OCEL1Q9H607 264 aa11.22□□□□□ -0.61
COMMD6-211ENST00000486516 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
COMMD6-211ENST00000486516 SNPHO15079 494 aa11.19□□□□□ -0.62
COMMD6-211ENST00000486516 FAM212AQ96EL1 285 aa11.19□□□□□ -0.62
COMMD6-211ENST00000486516 POTEB3A0JP26 581 aa11.17□□□□□ -0.62
COMMD6-211ENST00000486516 POTEBQ6S5H4 581 aa11.17□□□□□ -0.62
COMMD6-211ENST00000486516 PCDHB8Q9UN66 801 aa11.15□□□□□ -0.62
COMMD6-211ENST00000486516 PYGBP11216 843 aa11.14□□□□□ -0.63
COMMD6-211ENST00000486516 EMP3P54852 163 aa11.14□□□□□ -0.63
COMMD6-211ENST00000486516 KRTAP3-3Q9BYR6 98 aa11.14□□□□□ -0.63
COMMD6-211ENST00000486516 KRTAP3-2Q9BYR7 98 aa11.14□□□□□ -0.63
COMMD6-211ENST00000486516 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
COMMD6-211ENST00000486516 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
COMMD6-211ENST00000486516 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
COMMD6-211ENST00000486516 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
COMMD6-211ENST00000486516 DCAF8Q5TAQ9 597 aa11.07□□□□□ -0.64
COMMD6-211ENST00000486516 C3orf67Q6ZVT6 689 aa11.05□□□□□ -0.64
COMMD6-211ENST00000486516 L3MBTL3Q96JM7 780 aaPredicted RBP10.97□□□□□ -0.65
COMMD6-211ENST00000486516 MKRN3Q13064 507 aaKnown RBP10.95□□□□□ -0.66
COMMD6-211ENST00000486516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.94□□□□□ -0.66
COMMD6-211ENST00000486516 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
COMMD6-211ENST00000486516 DPY19L2Q6NUT2 758 aa10.92□□□□□ -0.66
COMMD6-211ENST00000486516 HOXB3P14651 431 aaPredicted RBP10.9□□□□□ -0.66
COMMD6-211ENST00000486516 ZNF467Q7Z7K2 595 aaPredicted RBP10.87□□□□□ -0.67
COMMD6-211ENST00000486516 PSEN1P49768 467 aa10.85□□□□□ -0.67
COMMD6-211ENST00000486516 FKBP8Q14318 412 aa10.83□□□□□ -0.68
COMMD6-211ENST00000486516 ILDR1Q86SU0 546 aaPredicted RBP10.83□□□□□ -0.68
COMMD6-211ENST00000486516 RNF166Q96A37 237 aaPredicted RBP10.83□□□□□ -0.68
COMMD6-211ENST00000486516 HOXB1P14653 301 aaPredicted RBP10.81□□□□□ -0.68
COMMD6-211ENST00000486516 ERBB3P21860 1342 aa10.81□□□□□ -0.68
COMMD6-211ENST00000486516 ZNF710Q8N1W2 664 aa10.78□□□□□ -0.68
COMMD6-211ENST00000486516 BOLA1Q9Y3E2 137 aa10.78□□□□□ -0.68
COMMD6-211ENST00000486516 GSE1Q14687 1217 aa10.77□□□□□ -0.69
COMMD6-211ENST00000486516 CHRM1P11229 460 aaPredicted RBP10.75□□□□□ -0.69
COMMD6-211ENST00000486516 VARS2Q5ST30 1063 aaKnown RBP10.75□□□□□ -0.69
COMMD6-211ENST00000486516 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
COMMD6-211ENST00000486516 MYT1LQ9UL68 1186 aa10.74□□□□□ -0.69
COMMD6-211ENST00000486516 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
COMMD6-211ENST00000486516 G3V3G9 751 aa10.72□□□□□ -0.69
COMMD6-211ENST00000486516 PDAP1Q13442 181 aaKnown RBP10.72□□□□□ -0.69
COMMD6-211ENST00000486516 DOK7Q18PE1 504 aa10.71□□□□□ -0.69
COMMD6-211ENST00000486516 FBXO3Q9UK99 471 aa10.65□□□□□ -0.7
COMMD6-211ENST00000486516 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
COMMD6-211ENST00000486516 TMEM92Q6UXU6 159 aa10.64□□□□□ -0.71
COMMD6-211ENST00000486516 ZNF687Q8N1G0 1237 aa10.63□□□□□ -0.71
COMMD6-211ENST00000486516 RIMBP2O15034 1052 aa10.6□□□□□ -0.71
COMMD6-211ENST00000486516 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
COMMD6-211ENST00000486516 ANKRD13DQ6ZTN6 518 aa10.57□□□□□ -0.72
COMMD6-211ENST00000486516 EFCAB3Q8N7B9 438 aa10.57□□□□□ -0.72
COMMD6-211ENST00000486516 CIZ1Q9ULV3 898 aaPredicted RBP10.55□□□□□ -0.72
COMMD6-211ENST00000486516 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
COMMD6-211ENST00000486516 ZSWIM6Q9HCJ5 1215 aa10.53□□□□□ -0.72
COMMD6-211ENST00000486516 KHSRPQ92945 711 aaKnown RBP eCLIP10.52□□□□□ -0.73
COMMD6-211ENST00000486516 PTGER2P43116 358 aa10.51□□□□□ -0.73
COMMD6-211ENST00000486516 ARSIQ5FYB1 569 aa10.51□□□□□ -0.73
COMMD6-211ENST00000486516 LSM11P83369 360 aaKnown RBP eCLIP10.46□□□□□ -0.73
COMMD6-211ENST00000486516 SPOCK2Q92563 424 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms