RNA–Protein interactions for RNA: ENST00000486464.1

TSC22D1-206, Transcript of TSC22 domain family member 1, humanhuman

TSL 5

Gene TSC22D1, Length 1,093 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-206ENST00000486464 SP7Q8TDD2 431 aaPredicted RBP14.27□□□□□ -0.13
TSC22D1-206ENST00000486464 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
TSC22D1-206ENST00000486464 CHADLQ6NUI6 762 aa14.2□□□□□ -0.14
TSC22D1-206ENST00000486464 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
TSC22D1-206ENST00000486464 WIZO95785 1651 aa14.16□□□□□ -0.14
TSC22D1-206ENST00000486464 EVX2Q03828 476 aa14.14□□□□□ -0.15
TSC22D1-206ENST00000486464 PDS5BQ9NTI5 1447 aa14.13□□□□□ -0.15
TSC22D1-206ENST00000486464 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
TSC22D1-206ENST00000486464 THOC2Q8NI27 1593 aaKnown RBP14.11□□□□□ -0.15
TSC22D1-206ENST00000486464 STAG3Q9UJ98 1225 aa14.11□□□□□ -0.15
TSC22D1-206ENST00000486464 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
TSC22D1-206ENST00000486464 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
TSC22D1-206ENST00000486464 FARP1Q9Y4F1 1045 aaPredicted RBP14.01□□□□□ -0.17
TSC22D1-206ENST00000486464 RSF1Q96T23 1441 aaPredicted RBP14□□□□□ -0.17
TSC22D1-206ENST00000486464 MRC2Q9UBG0 1479 aa13.99□□□□□ -0.17
TSC22D1-206ENST00000486464 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
TSC22D1-206ENST00000486464 PROM2Q8N271 834 aa13.96□□□□□ -0.17
TSC22D1-206ENST00000486464 CREBZFQ9NS37 354 aa13.96□□□□□ -0.17
TSC22D1-206ENST00000486464 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
TSC22D1-206ENST00000486464 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
TSC22D1-206ENST00000486464 WDR62O43379 1518 aa13.92□□□□□ -0.18
TSC22D1-206ENST00000486464 CFTRP13569 1480 aa13.9□□□□□ -0.18
TSC22D1-206ENST00000486464 CD44P16070 742 aaKnown RBP13.88□□□□□ -0.19
TSC22D1-206ENST00000486464 GABBR2O75899 941 aa13.84□□□□□ -0.19
TSC22D1-206ENST00000486464 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
TSC22D1-206ENST00000486464 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
TSC22D1-206ENST00000486464 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
TSC22D1-206ENST00000486464 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
TSC22D1-206ENST00000486464 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
TSC22D1-206ENST00000486464 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
TSC22D1-206ENST00000486464 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
TSC22D1-206ENST00000486464 CLCN6P51797 869 aa13.69□□□□□ -0.22
TSC22D1-206ENST00000486464 FKBP8Q14318 412 aa13.69□□□□□ -0.22
TSC22D1-206ENST00000486464 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
TSC22D1-206ENST00000486464 TOPBP1Q92547 1522 aa13.66□□□□□ -0.22
TSC22D1-206ENST00000486464 IFT140Q96RY7 1462 aa13.66□□□□□ -0.22
TSC22D1-206ENST00000486464 ABCC8Q09428 1581 aa13.65□□□□□ -0.22
TSC22D1-206ENST00000486464 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
TSC22D1-206ENST00000486464 ZNF608Q9ULD9 1512 aaPredicted RBP13.63□□□□□ -0.23
TSC22D1-206ENST00000486464 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
TSC22D1-206ENST00000486464 MIER1Q8N108 512 aa13.58□□□□□ -0.24
TSC22D1-206ENST00000486464 EIF4G3O43432 1585 aaKnown RBP13.56□□□□□ -0.24
TSC22D1-206ENST00000486464 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
TSC22D1-206ENST00000486464 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
TSC22D1-206ENST00000486464 SUPT5HO00267 1087 aaKnown RBP13.54□□□□□ -0.24
TSC22D1-206ENST00000486464 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
TSC22D1-206ENST00000486464 AQRO60306 1485 aaKnown RBP eCLIP13.53□□□□□ -0.24
TSC22D1-206ENST00000486464 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
TSC22D1-206ENST00000486464 POLA1P09884 1462 aaPredicted RBP13.51□□□□□ -0.25
TSC22D1-206ENST00000486464 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
TSC22D1-206ENST00000486464 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
TSC22D1-206ENST00000486464 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
TSC22D1-206ENST00000486464 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
TSC22D1-206ENST00000486464 SOGA1O94964 1423 aa13.49□□□□□ -0.25
TSC22D1-206ENST00000486464 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
TSC22D1-206ENST00000486464 CHD1O14646 1710 aa13.48□□□□□ -0.25
TSC22D1-206ENST00000486464 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
TSC22D1-206ENST00000486464 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
TSC22D1-206ENST00000486464 TDRD9Q8NDG6 1382 aaKnown RBP13.46□□□□□ -0.25
TSC22D1-206ENST00000486464 FGD5Q6ZNL6 1462 aa13.46□□□□□ -0.25
TSC22D1-206ENST00000486464 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
TSC22D1-206ENST00000486464 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
TSC22D1-206ENST00000486464 CUX1P39880 1505 aa13.43□□□□□ -0.26
TSC22D1-206ENST00000486464 CYB5RLQ6IPT4 315 aa13.41□□□□□ -0.26
TSC22D1-206ENST00000486464 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
TSC22D1-206ENST00000486464 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
TSC22D1-206ENST00000486464 LHX8Q68G74 356 aa13.39□□□□□ -0.27
TSC22D1-206ENST00000486464 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
TSC22D1-206ENST00000486464 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
TSC22D1-206ENST00000486464 SNAPC4Q5SXM2 1469 aa13.39□□□□□ -0.27
TSC22D1-206ENST00000486464 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
TSC22D1-206ENST00000486464 WDR97A6NE52 1622 aa13.38□□□□□ -0.27
TSC22D1-206ENST00000486464 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
TSC22D1-206ENST00000486464 MS4A3Q96HJ5 214 aa13.35□□□□□ -0.27
TSC22D1-206ENST00000486464 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
TSC22D1-206ENST00000486464 PBRM1Q86U86 1689 aa13.33□□□□□ -0.28
TSC22D1-206ENST00000486464 GAPVD1Q14C86 1478 aa13.32□□□□□ -0.28
TSC22D1-206ENST00000486464 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
TSC22D1-206ENST00000486464 NUBP1P53384 320 aa13.31□□□□□ -0.28
TSC22D1-206ENST00000486464 KIF12Q96FN5 646 aa13.31□□□□□ -0.28
TSC22D1-206ENST00000486464 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
TSC22D1-206ENST00000486464 ARAP1Q96P48 1450 aa13.29□□□□□ -0.28
TSC22D1-206ENST00000486464 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
TSC22D1-206ENST00000486464 WRNQ14191 1432 aaPredicted RBP eCLIP13.27□□□□□ -0.29
TSC22D1-206ENST00000486464 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
TSC22D1-206ENST00000486464 ABCA5Q8WWZ7 1642 aa13.25□□□□□ -0.29
TSC22D1-206ENST00000486464 ASTLQ6HA08 431 aaPredicted RBP13.24□□□□□ -0.29
TSC22D1-206ENST00000486464 MAP3K13O43283 966 aa13.23□□□□□ -0.29
TSC22D1-206ENST00000486464 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
TSC22D1-206ENST00000486464 TOP2BQ02880 1626 aa13.23□□□□□ -0.29
TSC22D1-206ENST00000486464 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
TSC22D1-206ENST00000486464 ATMINO43313 823 aaPredicted RBP13.21□□□□□ -0.29
TSC22D1-206ENST00000486464 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
TSC22D1-206ENST00000486464 FAM212AQ96EL1 285 aa13.2□□□□□ -0.3
TSC22D1-206ENST00000486464 GRIN2AQ12879 1464 aa13.17□□□□□ -0.3
TSC22D1-206ENST00000486464 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
TSC22D1-206ENST00000486464 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.3
TSC22D1-206ENST00000486464 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
TSC22D1-206ENST00000486464 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
TSC22D1-206ENST00000486464 ATN1P54259 1190 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms