RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
RTN4-214ENST00000486085 TSPYL2Q9H2G4 693 aaPredicted RBP15.24■□□□□ 0.03
RTN4-214ENST00000486085 PYGBP11216 843 aa15.19■□□□□ 0.02
RTN4-214ENST00000486085 RNF25Q96BH1 459 aaPredicted RBP15.18■□□□□ 0.02
RTN4-214ENST00000486085 CHRM1P11229 460 aaPredicted RBP15.16■□□□□ 0.02
RTN4-214ENST00000486085 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
RTN4-214ENST00000486085 CHGAP10645 457 aaKnown RBP15.12■□□□□ 0.01
RTN4-214ENST00000486085 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
RTN4-214ENST00000486085 PLCB2Q00722 1185 aa15.08■□□□□ 0
RTN4-214ENST00000486085 BBXQ8WY36 941 aaPredicted RBP15.08■□□□□ 0
RTN4-214ENST00000486085 CCDC61Q9Y6R9 512 aa15.06■□□□□ 0
RTN4-214ENST00000486085 TAOK2Q9UL54 1235 aa15.05■□□□□ -0
RTN4-214ENST00000486085 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.04■□□□□ -0
RTN4-214ENST00000486085 VGFO15240 615 aaPredicted RBP15.01□□□□□ -0.01
RTN4-214ENST00000486085 CD44P16070 742 aaKnown RBP15□□□□□ -0.01
RTN4-214ENST00000486085 HS6ST3Q8IZP7 471 aa14.99□□□□□ -0.01
RTN4-214ENST00000486085 ZRANB1Q9UGI0 708 aa14.99□□□□□ -0.01
RTN4-214ENST00000486085 PAXIP1Q6ZW49 1069 aaPredicted RBP14.96□□□□□ -0.01
RTN4-214ENST00000486085 STK25O00506 426 aa14.95□□□□□ -0.02
RTN4-214ENST00000486085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.94□□□□□ -0.02
RTN4-214ENST00000486085 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
RTN4-214ENST00000486085 ZFP91Q96JP5 570 aaPredicted RBP14.94□□□□□ -0.02
RTN4-214ENST00000486085 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
RTN4-214ENST00000486085 PCDHB8Q9UN66 801 aa14.94□□□□□ -0.02
RTN4-214ENST00000486085 PCDHB13Q9Y5F0 798 aa14.94□□□□□ -0.02
RTN4-214ENST00000486085 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
RTN4-214ENST00000486085 SGIP1Q9BQI5 828 aa14.91□□□□□ -0.02
RTN4-214ENST00000486085 MAP3K13O43283 966 aa14.9□□□□□ -0.02
RTN4-214ENST00000486085 KIF12Q96FN5 646 aa14.9□□□□□ -0.02
RTN4-214ENST00000486085 BCL11BQ9C0K0 894 aaPredicted RBP14.89□□□□□ -0.03
RTN4-214ENST00000486085 STK24Q9Y6E0 443 aa14.89□□□□□ -0.03
RTN4-214ENST00000486085 C19orf67A6NJJ6 358 aa14.88□□□□□ -0.03
RTN4-214ENST00000486085 SPRYD3Q8NCJ5 442 aa14.88□□□□□ -0.03
RTN4-214ENST00000486085 PHF12Q96QT6 1004 aa14.88□□□□□ -0.03
RTN4-214ENST00000486085 ZNF579Q8NAF0 562 aaKnown RBP14.87□□□□□ -0.03
RTN4-214ENST00000486085 IFNL1Q8IU54 200 aa14.85□□□□□ -0.03
RTN4-214ENST00000486085 PDAP1Q13442 181 aaKnown RBP14.84□□□□□ -0.03
RTN4-214ENST00000486085 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.04
RTN4-214ENST00000486085 PSEN1P49768 467 aa14.81□□□□□ -0.04
RTN4-214ENST00000486085 NKX1-1Q15270 411 aaPredicted RBP14.81□□□□□ -0.04
RTN4-214ENST00000486085 HAX1O00165 279 aa14.78□□□□□ -0.04
RTN4-214ENST00000486085 GTPBP6O43824 516 aaPredicted RBP14.7□□□□□ -0.06
RTN4-214ENST00000486085 MS4A3Q96HJ5 214 aa14.69□□□□□ -0.06
RTN4-214ENST00000486085 EVX2Q03828 476 aa14.68□□□□□ -0.06
RTN4-214ENST00000486085 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
RTN4-214ENST00000486085 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
RTN4-214ENST00000486085 CABP2Q9NPB3 220 aa14.64□□□□□ -0.07
RTN4-214ENST00000486085 TRPC6Q9Y210 931 aa14.63□□□□□ -0.07
RTN4-214ENST00000486085 RYDENQ9NUL5 291 aaKnown RBP14.61□□□□□ -0.07
RTN4-214ENST00000486085 TMEM106CQ9BVX2 250 aa14.6□□□□□ -0.07
RTN4-214ENST00000486085 EFCAB3Q8N7B9 438 aa14.59□□□□□ -0.07
RTN4-214ENST00000486085 POTEHQ6S545 545 aa14.57□□□□□ -0.08
RTN4-214ENST00000486085 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
RTN4-214ENST00000486085 KDM2AQ9Y2K7 1162 aa14.56□□□□□ -0.08
RTN4-214ENST00000486085 MFRPQ9BY79 579 aa14.54□□□□□ -0.08
RTN4-214ENST00000486085 GOLGA2Q08379 1002 aa14.52□□□□□ -0.09
RTN4-214ENST00000486085 SOX12O15370 315 aa14.5□□□□□ -0.09
RTN4-214ENST00000486085 TIE1P35590 1138 aa14.5□□□□□ -0.09
RTN4-214ENST00000486085 CLCN6P51797 869 aa14.5□□□□□ -0.09
RTN4-214ENST00000486085 PHF8Q9UPP1 1060 aa14.49□□□□□ -0.09
RTN4-214ENST00000486085 TTLL13PA6NNM8 815 aa14.48□□□□□ -0.09
RTN4-214ENST00000486085 NLRP6P59044 892 aa14.48□□□□□ -0.09
RTN4-214ENST00000486085 BMP2KQ9NSY1 1161 aaPredicted RBP14.47□□□□□ -0.09
RTN4-214ENST00000486085 FBXO22Q8NEZ5 403 aa14.45□□□□□ -0.1
RTN4-214ENST00000486085 MKRN3Q13064 507 aaKnown RBP14.44□□□□□ -0.1
RTN4-214ENST00000486085 PPP1R37O75864 691 aa14.4□□□□□ -0.1
RTN4-214ENST00000486085 GABBR2O75899 941 aa14.4□□□□□ -0.1
RTN4-214ENST00000486085 TRIM35Q9UPQ4 493 aa14.4□□□□□ -0.1
RTN4-214ENST00000486085 ATN1P54259 1190 aaPredicted RBP14.35□□□□□ -0.11
RTN4-214ENST00000486085 MS4A4AQ96JQ5 239 aa14.35□□□□□ -0.11
RTN4-214ENST00000486085 ATMINO43313 823 aaPredicted RBP14.34□□□□□ -0.11
RTN4-214ENST00000486085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.33□□□□□ -0.12
RTN4-214ENST00000486085 CADPS2Q86UW7 1296 aa14.32□□□□□ -0.12
RTN4-214ENST00000486085 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
RTN4-214ENST00000486085 DCBLD2Q96PD2 775 aa14.27□□□□□ -0.13
RTN4-214ENST00000486085 ILDR1Q86SU0 546 aaPredicted RBP14.23□□□□□ -0.13
RTN4-214ENST00000486085 BCANQ96GW7 911 aa14.23□□□□□ -0.13
RTN4-214ENST00000486085 DPY19L2Q6NUT2 758 aa14.21□□□□□ -0.13
RTN4-214ENST00000486085 SP7Q8TDD2 431 aaPredicted RBP14.2□□□□□ -0.14
RTN4-214ENST00000486085 WDR70Q9NW82 654 aa14.2□□□□□ -0.14
RTN4-214ENST00000486085 IER5LQ5T953 404 aa14.19□□□□□ -0.14
RTN4-214ENST00000486085 IRX5P78411 483 aaPredicted RBP14.18□□□□□ -0.14
RTN4-214ENST00000486085 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
RTN4-214ENST00000486085 OCEL1Q9H607 264 aa14.16□□□□□ -0.14
RTN4-214ENST00000486085 PDCD7Q8N8D1 485 aaKnown RBP14.15□□□□□ -0.14
RTN4-214ENST00000486085 PLCG2P16885 1265 aa14.13□□□□□ -0.15
RTN4-214ENST00000486085 SEC24BO95487 1268 aa14.1□□□□□ -0.15
RTN4-214ENST00000486085 POTEIP0CG38 1075 aa14.1□□□□□ -0.15
RTN4-214ENST00000486085 PDE4AP27815 886 aa14.1□□□□□ -0.15
RTN4-214ENST00000486085 NCKAP5LQ9HCH0 1330 aa14.1□□□□□ -0.15
RTN4-214ENST00000486085 SLC39A7Q92504 469 aa14.08□□□□□ -0.16
RTN4-214ENST00000486085 LARP6Q9BRS8 491 aaKnown RBP14.08□□□□□ -0.16
RTN4-214ENST00000486085 MICALL2Q8IY33 904 aa14.07□□□□□ -0.16
RTN4-214ENST00000486085 COLQQ9Y215 455 aaPredicted RBP14.07□□□□□ -0.16
RTN4-214ENST00000486085 NBR1Q14596 966 aa14.06□□□□□ -0.16
RTN4-214ENST00000486085 G3V3G9 751 aa14.05□□□□□ -0.16
RTN4-214ENST00000486085 C7P10643 843 aa14.04□□□□□ -0.16
RTN4-214ENST00000486085 CRISPLD2Q9H0B8 497 aa14.04□□□□□ -0.16
RTN4-214ENST00000486085 BOLA1Q9Y3E2 137 aa14.04□□□□□ -0.16
RTN4-214ENST00000486085 P3H3Q8IVL6 736 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms