RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 TSPYL2Q9H2G4 693 aaPredicted RBP8.19□□□□□ -1.1
SMARCC1-206ENST00000485737 KLHL34Q8N239 644 aa8.18□□□□□ -1.1
SMARCC1-206ENST00000485737 MAMSTRQ6ZN01 415 aa8.15□□□□□ -1.1
SMARCC1-206ENST00000485737 POTEIP0CG38 1075 aa8.13□□□□□ -1.11
SMARCC1-206ENST00000485737 RASEFQ8IZ41 740 aa8.13□□□□□ -1.11
SMARCC1-206ENST00000485737 PHF12Q96QT6 1004 aa8.13□□□□□ -1.11
SMARCC1-206ENST00000485737 NUBP1P53384 320 aa8.09□□□□□ -1.11
SMARCC1-206ENST00000485737 IFNLR1Q8IU57 520 aaPredicted RBP8.08□□□□□ -1.12
SMARCC1-206ENST00000485737 FAM212AQ96EL1 285 aa8.08□□□□□ -1.12
SMARCC1-206ENST00000485737 DCAF8Q5TAQ9 597 aa8.07□□□□□ -1.12
SMARCC1-206ENST00000485737 SLC39A7Q92504 469 aa8.07□□□□□ -1.12
SMARCC1-206ENST00000485737 C7P10643 843 aa8.06□□□□□ -1.12
SMARCC1-206ENST00000485737 CCDC61Q9Y6R9 512 aa8.06□□□□□ -1.12
SMARCC1-206ENST00000485737 GALR2O43603 387 aaPredicted RBP8.05□□□□□ -1.12
SMARCC1-206ENST00000485737 SPOCK2Q92563 424 aa8.03□□□□□ -1.12
SMARCC1-206ENST00000485737 MS4A3Q96HJ5 214 aa8.02□□□□□ -1.13
SMARCC1-206ENST00000485737 SCUBE2Q9NQ36 999 aa8.01□□□□□ -1.13
SMARCC1-206ENST00000485737 ASTLQ6HA08 431 aaPredicted RBP8□□□□□ -1.13
SMARCC1-206ENST00000485737 KIF12Q96FN5 646 aa8□□□□□ -1.13
SMARCC1-206ENST00000485737 CIZ1Q9ULV3 898 aaPredicted RBP8□□□□□ -1.13
SMARCC1-206ENST00000485737 ZCCHC6Q5VYS8 1495 aaKnown RBP8□□□□□ -1.13
SMARCC1-206ENST00000485737 MAP3K13O43283 966 aa7.99□□□□□ -1.13
SMARCC1-206ENST00000485737 PYGBP11216 843 aa7.98□□□□□ -1.13
SMARCC1-206ENST00000485737 GSE1Q14687 1217 aa7.98□□□□□ -1.13
SMARCC1-206ENST00000485737 OTUD5Q96G74 571 aa7.97□□□□□ -1.13
SMARCC1-206ENST00000485737 PCDHB13Q9Y5F0 798 aa7.97□□□□□ -1.13
SMARCC1-206ENST00000485737 CCDC180Q9P1Z9 1646 aa7.96□□□□□ -1.13
SMARCC1-206ENST00000485737 POTEMA6NI47 508 aa7.96□□□□□ -1.14
SMARCC1-206ENST00000485737 METRNQ9UJH8 293 aa7.96□□□□□ -1.14
SMARCC1-206ENST00000485737 POTEGQ6S5H5 508 aa7.92□□□□□ -1.14
SMARCC1-206ENST00000485737 IFNL1Q8IU54 200 aa7.91□□□□□ -1.14
SMARCC1-206ENST00000485737 TRPC6Q9Y210 931 aa7.91□□□□□ -1.14
SMARCC1-206ENST00000485737 SGIP1Q9BQI5 828 aa7.9□□□□□ -1.14
SMARCC1-206ENST00000485737 ATMINO43313 823 aaPredicted RBP7.89□□□□□ -1.15
SMARCC1-206ENST00000485737 TIE1P35590 1138 aa7.88□□□□□ -1.15
SMARCC1-206ENST00000485737 PCDHB8Q9UN66 801 aa7.88□□□□□ -1.15
SMARCC1-206ENST00000485737 BMP2KQ9NSY1 1161 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-206ENST00000485737 SHROOM4Q9ULL8 1493 aa7.87□□□□□ -1.15
SMARCC1-206ENST00000485737 ATN1P54259 1190 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-206ENST00000485737 IER5LQ5T953 404 aa7.86□□□□□ -1.15
SMARCC1-206ENST00000485737 PELP1Q8IZL8 1130 aaKnown RBP7.85□□□□□ -1.15
SMARCC1-206ENST00000485737 ZNF467Q7Z7K2 595 aaPredicted RBP7.84□□□□□ -1.15
SMARCC1-206ENST00000485737 TMEM106CQ9BVX2 250 aa7.84□□□□□ -1.15
SMARCC1-206ENST00000485737 TTLL13PA6NNM8 815 aa7.83□□□□□ -1.16
SMARCC1-206ENST00000485737 CHRM1P11229 460 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-206ENST00000485737 HRCP23327 699 aa7.83□□□□□ -1.16
SMARCC1-206ENST00000485737 TRIM41Q8WV44 630 aa7.82□□□□□ -1.16
SMARCC1-206ENST00000485737 MYO15BQ96JP2 1530 aa7.82□□□□□ -1.16
SMARCC1-206ENST00000485737 POTEB2H3BUK9 544 aa7.81□□□□□ -1.16
SMARCC1-206ENST00000485737 TRIM35Q9UPQ4 493 aa7.8□□□□□ -1.16
SMARCC1-206ENST00000485737 SEC24BO95487 1268 aa7.79□□□□□ -1.16
SMARCC1-206ENST00000485737 DCAF1Q9Y4B6 1507 aa7.78□□□□□ -1.16
SMARCC1-206ENST00000485737 ECM2O94769 699 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-206ENST00000485737 PSEN1P49768 467 aa7.77□□□□□ -1.17
SMARCC1-206ENST00000485737 SUPT5HO00267 1087 aaKnown RBP7.76□□□□□ -1.17
SMARCC1-206ENST00000485737 GOLGA2Q08379 1002 aa7.76□□□□□ -1.17
SMARCC1-206ENST00000485737 PDAP1Q13442 181 aaKnown RBP7.76□□□□□ -1.17
SMARCC1-206ENST00000485737 SNPHO15079 494 aa7.74□□□□□ -1.17
SMARCC1-206ENST00000485737 RIOK3O14730 519 aaKnown RBP7.73□□□□□ -1.17
SMARCC1-206ENST00000485737 TMEM121BQ9BXQ6 578 aaPredicted RBP7.73□□□□□ -1.17
SMARCC1-206ENST00000485737 PKD2Q13563 968 aa7.72□□□□□ -1.17
SMARCC1-206ENST00000485737 RNF25Q96BH1 459 aaPredicted RBP7.72□□□□□ -1.17
SMARCC1-206ENST00000485737 FAM163AQ96GL9 167 aaPredicted RBP7.72□□□□□ -1.17
SMARCC1-206ENST00000485737 MKRN3Q13064 507 aaKnown RBP7.71□□□□□ -1.18
SMARCC1-206ENST00000485737 CABP2Q9NPB3 220 aa7.7□□□□□ -1.18
SMARCC1-206ENST00000485737 COLQQ9Y215 455 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-206ENST00000485737 PLCG2P16885 1265 aa7.69□□□□□ -1.18
SMARCC1-206ENST00000485737 POTEFA5A3E0 1075 aa7.68□□□□□ -1.18
SMARCC1-206ENST00000485737 VGFO15240 615 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-206ENST00000485737 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.67□□□□□ -1.18
SMARCC1-206ENST00000485737 RGL2O15211 777 aa7.67□□□□□ -1.18
SMARCC1-206ENST00000485737 ZFP91Q96JP5 570 aaPredicted RBP7.67□□□□□ -1.18
SMARCC1-206ENST00000485737 TAOK2Q9UL54 1235 aa7.67□□□□□ -1.18
SMARCC1-206ENST00000485737 IRX5P78411 483 aaPredicted RBP7.65□□□□□ -1.18
SMARCC1-206ENST00000485737 OCEL1Q9H607 264 aa7.65□□□□□ -1.18
SMARCC1-206ENST00000485737 POTEJP0CG39 1038 aa7.64□□□□□ -1.19
SMARCC1-206ENST00000485737 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.64□□□□□ -1.196e-11■■■■■ 27.8
SMARCC1-206ENST00000485737 STK25O00506 426 aa7.62□□□□□ -1.19
SMARCC1-206ENST00000485737 CDAN1Q8IWY9 1227 aa7.62□□□□□ -1.19
SMARCC1-206ENST00000485737 EFCAB3Q8N7B9 438 aa7.62□□□□□ -1.19
SMARCC1-206ENST00000485737 BCL11BQ9C0K0 894 aaPredicted RBP7.62□□□□□ -1.19
SMARCC1-206ENST00000485737 STK24Q9Y6E0 443 aa7.62□□□□□ -1.19
SMARCC1-206ENST00000485737 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
SMARCC1-206ENST00000485737 SLAIN1Q8ND83 568 aa7.6□□□□□ -1.19
SMARCC1-206ENST00000485737 ABCC9O60706 1549 aa7.6□□□□□ -1.19
SMARCC1-206ENST00000485737 DCAF8L2P0C7V8 631 aa7.58□□□□□ -1.2
SMARCC1-206ENST00000485737 PDCD7Q8N8D1 485 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-206ENST00000485737 PCGF6Q9BYE7 350 aa7.58□□□□□ -1.2
SMARCC1-206ENST00000485737 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-206ENST00000485737 G3V3G9 751 aa7.56□□□□□ -1.2
SMARCC1-206ENST00000485737 DPY19L2Q6NUT2 758 aa7.55□□□□□ -1.2
SMARCC1-206ENST00000485737 SOX12O15370 315 aa7.54□□□□□ -1.2
SMARCC1-206ENST00000485737 L3MBTL3Q96JM7 780 aaPredicted RBP7.54□□□□□ -1.2
SMARCC1-206ENST00000485737 PHF8Q9UPP1 1060 aa7.54□□□□□ -1.2
SMARCC1-206ENST00000485737 CHGAP10645 457 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-206ENST00000485737 C3orf67Q6ZVT6 689 aa7.53□□□□□ -1.2
SMARCC1-206ENST00000485737 ST18O60284 1047 aa7.52□□□□□ -1.21
SMARCC1-206ENST00000485737 ILDR1Q86SU0 546 aaPredicted RBP7.51□□□□□ -1.21
SMARCC1-206ENST00000485737 NLRP6P59044 892 aa7.5□□□□□ -1.21
SMARCC1-206ENST00000485737 TRIM26Q12899 539 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms