RNA–Protein interactions for RNA: ENST00000485171.1

KDM3A-212, Transcript of lysine demethylase 3A, humanhuman

TSL 4

Gene KDM3A, Length 556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-212ENST00000485171 KLHL34Q8N239 644 aa8.7□□□□□ -1.02
KDM3A-212ENST00000485171 PLCD3Q8N3E9 789 aa8.69□□□□□ -1.02
KDM3A-212ENST00000485171 SPOCK2Q92563 424 aa8.69□□□□□ -1.02
KDM3A-212ENST00000485171 CADPSQ9ULU8 1353 aa8.69□□□□□ -1.02
KDM3A-212ENST00000485171 ZBTB47Q9UFB7 747 aaPredicted RBP8.67□□□□□ -1.02
KDM3A-212ENST00000485171 MIER1Q8N108 512 aa8.66□□□□□ -1.02
KDM3A-212ENST00000485171 RBM42Q9BTD8 480 aaKnown RBP8.65□□□□□ -1.02
KDM3A-212ENST00000485171 LAMC3Q9Y6N6 1575 aa8.64□□□□□ -1.03
KDM3A-212ENST00000485171 PKD2Q13563 968 aa8.59□□□□□ -1.03
KDM3A-212ENST00000485171 PRDM2Q13029 1718 aa8.59□□□□□ -1.03
KDM3A-212ENST00000485171 AKT1S1Q96B36 256 aa8.58□□□□□ -1.04
KDM3A-212ENST00000485171 NESP48681 1621 aa8.57□□□□□ -1.04
KDM3A-212ENST00000485171 PDS5BQ9NTI5 1447 aa8.56□□□□□ -1.04
KDM3A-212ENST00000485171 SPDYE1Q8NFV5 336 aaPredicted RBP8.56□□□□□ -1.04
KDM3A-212ENST00000485171 FANCD2Q9BXW9 1451 aa8.54□□□□□ -1.04
KDM3A-212ENST00000485171 ECM2O94769 699 aaPredicted RBP8.53□□□□□ -1.04
KDM3A-212ENST00000485171 WRNQ14191 1432 aaPredicted RBP eCLIP8.53□□□□□ -1.04
KDM3A-212ENST00000485171 TRIM41Q8WV44 630 aa8.52□□□□□ -1.05
KDM3A-212ENST00000485171 PLCB2Q00722 1185 aa8.5□□□□□ -1.05
KDM3A-212ENST00000485171 ABCC8Q09428 1581 aa8.5□□□□□ -1.05
KDM3A-212ENST00000485171 TOP2BQ02880 1626 aa8.5□□□□□ -1.05
KDM3A-212ENST00000485171 BIVM-ERCC5R4GMW8 1640 aa8.5□□□□□ -1.05
KDM3A-212ENST00000485171 CEP164Q9UPV0 1460 aa8.5□□□□□ -1.05
KDM3A-212ENST00000485171 CUX1P39880 1505 aa8.49□□□□□ -1.05
KDM3A-212ENST00000485171 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
KDM3A-212ENST00000485171 DNMBPQ6XZF7 1577 aa8.47□□□□□ -1.05
KDM3A-212ENST00000485171 URB2Q14146 1524 aaKnown RBP8.46□□□□□ -1.05
KDM3A-212ENST00000485171 PRR29P0C7W0 189 aa8.46□□□□□ -1.06
KDM3A-212ENST00000485171 GSE1Q14687 1217 aa8.46□□□□□ -1.06
KDM3A-212ENST00000485171 CIZ1Q9ULV3 898 aaPredicted RBP8.46□□□□□ -1.06
KDM3A-212ENST00000485171 KIF21AQ7Z4S6 1674 aa8.46□□□□□ -1.06
KDM3A-212ENST00000485171 TOPBP1Q92547 1522 aa8.45□□□□□ -1.06
KDM3A-212ENST00000485171 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.45□□□□□ -1.06
KDM3A-212ENST00000485171 MRC2Q9UBG0 1479 aa8.45□□□□□ -1.06
KDM3A-212ENST00000485171 WDR62O43379 1518 aa8.44□□□□□ -1.06
KDM3A-212ENST00000485171 REM2Q8IYK8 340 aaPredicted RBP8.44□□□□□ -1.06
KDM3A-212ENST00000485171 BBXQ8WY36 941 aaPredicted RBP8.43□□□□□ -1.06
KDM3A-212ENST00000485171 CLEC11AQ9Y240 323 aa8.43□□□□□ -1.06
KDM3A-212ENST00000485171 THOC2Q8NI27 1593 aaKnown RBP8.42□□□□□ -1.06
KDM3A-212ENST00000485171 POLA1P09884 1462 aaPredicted RBP8.4□□□□□ -1.06
KDM3A-212ENST00000485171 TAOK2Q9UL54 1235 aa8.4□□□□□ -1.06
KDM3A-212ENST00000485171 ERCC6Q03468 1493 aa8.39□□□□□ -1.07
KDM3A-212ENST00000485171 FGD5Q6ZNL6 1462 aa8.39□□□□□ -1.07
KDM3A-212ENST00000485171 EEA1Q15075 1411 aa8.39□□□□□ -1.07
KDM3A-212ENST00000485171 ABCA10Q8WWZ4 1543 aa8.39□□□□□ -1.07
KDM3A-212ENST00000485171 RGL2O15211 777 aa8.38□□□□□ -1.07
KDM3A-212ENST00000485171 CUX2O14529 1486 aa8.38□□□□□ -1.07
KDM3A-212ENST00000485171 TARBP1Q13395 1621 aaKnown RBP8.36□□□□□ -1.07
KDM3A-212ENST00000485171 NPM1P06748 294 aaKnown RBP eCLIP8.36□□□□□ -1.07
KDM3A-212ENST00000485171 NUBP1P53384 320 aa8.36□□□□□ -1.07
KDM3A-212ENST00000485171 HAP1P54257 671 aaPredicted RBP8.36□□□□□ -1.07
KDM3A-212ENST00000485171 CREBZFQ9NS37 354 aa8.36□□□□□ -1.07
KDM3A-212ENST00000485171 SOGA1O94964 1423 aa8.36□□□□□ -1.07
KDM3A-212ENST00000485171 DCAF8Q5TAQ9 597 aa8.35□□□□□ -1.07
KDM3A-212ENST00000485171 FAM212AQ96EL1 285 aa8.35□□□□□ -1.07
KDM3A-212ENST00000485171 WDR97A6NE52 1622 aa8.35□□□□□ -1.07
KDM3A-212ENST00000485171 IFT140Q96RY7 1462 aa8.34□□□□□ -1.07
KDM3A-212ENST00000485171 KIF27Q86VH2 1401 aa8.33□□□□□ -1.08
KDM3A-212ENST00000485171 VSIG10Q8N0Z9 540 aa8.33□□□□□ -1.08
KDM3A-212ENST00000485171 RAD54L2Q9Y4B4 1467 aa8.32□□□□□ -1.08
KDM3A-212ENST00000485171 RUSC2Q8N2Y8 1516 aa8.31□□□□□ -1.08
KDM3A-212ENST00000485171 PITPNM1O00562 1244 aa8.31□□□□□ -1.08
KDM3A-212ENST00000485171 ABCA5Q8WWZ7 1642 aa8.31□□□□□ -1.08
KDM3A-212ENST00000485171 CHRM1P11229 460 aaPredicted RBP8.3□□□□□ -1.08
KDM3A-212ENST00000485171 MNX1P50219 401 aaPredicted RBP8.3□□□□□ -1.08
KDM3A-212ENST00000485171 SPRYD3Q8NCJ5 442 aa8.3□□□□□ -1.08
KDM3A-212ENST00000485171 IGF1RP08069 1367 aa8.3□□□□□ -1.08
KDM3A-212ENST00000485171 CHGAP10645 457 aaKnown RBP8.29□□□□□ -1.08
KDM3A-212ENST00000485171 PRXQ9BXM0 1461 aa8.29□□□□□ -1.08
KDM3A-212ENST00000485171 PAXIP1Q6ZW49 1069 aaPredicted RBP8.28□□□□□ -1.08
KDM3A-212ENST00000485171 ERICH3Q5RHP9 1530 aa8.28□□□□□ -1.08
KDM3A-212ENST00000485171 HS6ST3Q8IZP7 471 aa8.27□□□□□ -1.09
KDM3A-212ENST00000485171 GAPVD1Q14C86 1478 aa8.26□□□□□ -1.09
KDM3A-212ENST00000485171 RIOK3O14730 519 aaKnown RBP8.26□□□□□ -1.09
KDM3A-212ENST00000485171 CFAP44Q96MT7 982 aa8.26□□□□□ -1.09
KDM3A-212ENST00000485171 TDRD9Q8NDG6 1382 aaKnown RBP8.25□□□□□ -1.09
KDM3A-212ENST00000485171 ZNF608Q9ULD9 1512 aaPredicted RBP8.25□□□□□ -1.09
KDM3A-212ENST00000485171 DNAJC5Q9H3Z4 198 aa8.25□□□□□ -1.09
KDM3A-212ENST00000485171 GRIN2BQ13224 1484 aa8.25□□□□□ -1.09
KDM3A-212ENST00000485171 KIF21BO75037 1637 aa8.25□□□□□ -1.09
KDM3A-212ENST00000485171 VGFO15240 615 aaPredicted RBP8.23□□□□□ -1.09
KDM3A-212ENST00000485171 AQRO60306 1485 aaKnown RBP eCLIP8.23□□□□□ -1.093e-8■■■■■ 27.8
KDM3A-212ENST00000485171 EIF4G3O43432 1585 aaKnown RBP8.22□□□□□ -1.09
KDM3A-212ENST00000485171 CUL7Q14999 1698 aa8.22□□□□□ -1.09
KDM3A-212ENST00000485171 CARMIL1Q5VZK9 1371 aa8.22□□□□□ -1.09
KDM3A-212ENST00000485171 MAGI1Q96QZ7 1491 aaPredicted RBP8.21□□□□□ -1.09
KDM3A-212ENST00000485171 RASEFQ8IZ41 740 aa8.21□□□□□ -1.1
KDM3A-212ENST00000485171 SGIP1Q9BQI5 828 aa8.21□□□□□ -1.1
KDM3A-212ENST00000485171 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
KDM3A-212ENST00000485171 GOLGA3Q08378 1498 aa8.19□□□□□ -1.1
KDM3A-212ENST00000485171 RAPGEF2Q9Y4G8 1499 aa8.19□□□□□ -1.1
KDM3A-212ENST00000485171 RNF25Q96BH1 459 aaPredicted RBP8.19□□□□□ -1.1
KDM3A-212ENST00000485171 TNIKQ9UKE5 1360 aa8.19□□□□□ -1.1
KDM3A-212ENST00000485171 ADAMTS12P58397 1594 aa8.18□□□□□ -1.1
KDM3A-212ENST00000485171 PBRM1Q86U86 1689 aa8.18□□□□□ -1.1
KDM3A-212ENST00000485171 FAM9AQ8IZU1 332 aaPredicted RBP8.18□□□□□ -1.1
KDM3A-212ENST00000485171 BCANQ96GW7 911 aa8.18□□□□□ -1.1
KDM3A-212ENST00000485171 RYDENQ9NUL5 291 aaKnown RBP8.18□□□□□ -1.1
KDM3A-212ENST00000485171 FARP1Q9Y4F1 1045 aaPredicted RBP8.17□□□□□ -1.1
KDM3A-212ENST00000485171 LOC105371045A0A1W2PR82 267 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms