RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
TM9SF3-205ENST00000485093 NUBP1P53384 320 aa10.45□□□□□ -0.74
TM9SF3-205ENST00000485093 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
TM9SF3-205ENST00000485093 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
TM9SF3-205ENST00000485093 LCE2DQ5TA82 110 aaPredicted RBP10.43□□□□□ -0.74
TM9SF3-205ENST00000485093 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
TM9SF3-205ENST00000485093 GALR2O43603 387 aaPredicted RBP10.39□□□□□ -0.75
TM9SF3-205ENST00000485093 PLEKHG5O94827 1062 aa10.39□□□□□ -0.75
TM9SF3-205ENST00000485093 PKD2Q13563 968 aa10.38□□□□□ -0.75
TM9SF3-205ENST00000485093 KLHL34Q8N239 644 aa10.38□□□□□ -0.75
TM9SF3-205ENST00000485093 ZRANB1Q9UGI0 708 aa10.33□□□□□ -0.76
TM9SF3-205ENST00000485093 RASEFQ8IZ41 740 aa10.32□□□□□ -0.76
TM9SF3-205ENST00000485093 NPM1P06748 294 aaKnown RBP eCLIP10.31□□□□□ -0.76
TM9SF3-205ENST00000485093 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
TM9SF3-205ENST00000485093 PELP1Q8IZL8 1130 aaKnown RBP10.28□□□□□ -0.76
TM9SF3-205ENST00000485093 CHRM1P11229 460 aaPredicted RBP10.25□□□□□ -0.77
TM9SF3-205ENST00000485093 GSE1Q14687 1217 aa10.23□□□□□ -0.77
TM9SF3-205ENST00000485093 MAMSTRQ6ZN01 415 aa10.2□□□□□ -0.78
TM9SF3-205ENST00000485093 FAM163AQ96GL9 167 aaPredicted RBP10.2□□□□□ -0.78
TM9SF3-205ENST00000485093 CCDC61Q9Y6R9 512 aa10.2□□□□□ -0.78
TM9SF3-205ENST00000485093 TRIM41Q8WV44 630 aa10.19□□□□□ -0.78
TM9SF3-205ENST00000485093 METRNQ9UJH8 293 aa10.19□□□□□ -0.78
TM9SF3-205ENST00000485093 FAM212AQ96EL1 285 aa10.18□□□□□ -0.78
TM9SF3-205ENST00000485093 DCAF8Q5TAQ9 597 aa10.17□□□□□ -0.78
TM9SF3-205ENST00000485093 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.78
TM9SF3-205ENST00000485093 ASTLQ6HA08 431 aaPredicted RBP10.14□□□□□ -0.79
TM9SF3-205ENST00000485093 RNF25Q96BH1 459 aaPredicted RBP10.14□□□□□ -0.79
TM9SF3-205ENST00000485093 PHF12Q96QT6 1004 aa10.14□□□□□ -0.79
TM9SF3-205ENST00000485093 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
TM9SF3-205ENST00000485093 CDAN1Q8IWY9 1227 aa10.13□□□□□ -0.79
TM9SF3-205ENST00000485093 SLC39A7Q92504 469 aa10.13□□□□□ -0.79
TM9SF3-205ENST00000485093 RGL2O15211 777 aa10.12□□□□□ -0.79
TM9SF3-205ENST00000485093 C7P10643 843 aa10.12□□□□□ -0.79
TM9SF3-205ENST00000485093 TSPYL2Q9H2G4 693 aaPredicted RBP10.11□□□□□ -0.79
TM9SF3-205ENST00000485093 SCUBE2Q9NQ36 999 aa10.09□□□□□ -0.79
TM9SF3-205ENST00000485093 ATMINO43313 823 aaPredicted RBP10.08□□□□□ -0.8
TM9SF3-205ENST00000485093 KIF12Q96FN5 646 aa10.08□□□□□ -0.8
TM9SF3-205ENST00000485093 SGIP1Q9BQI5 828 aa10.07□□□□□ -0.8
TM9SF3-205ENST00000485093 PYGBP11216 843 aa10.06□□□□□ -0.8
TM9SF3-205ENST00000485093 PAK3O75914 559 aaPredicted RBP10.03□□□□□ -0.8
TM9SF3-205ENST00000485093 MAP3K13O43283 966 aa10.01□□□□□ -0.81
TM9SF3-205ENST00000485093 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
TM9SF3-205ENST00000485093 RIOK3O14730 519 aaKnown RBP10□□□□□ -0.81
TM9SF3-205ENST00000485093 MMRN1Q13201 1228 aa9.99□□□□□ -0.81
TM9SF3-205ENST00000485093 MS4A3Q96HJ5 214 aa9.99□□□□□ -0.81
TM9SF3-205ENST00000485093 IFNL1Q8IU54 200 aa9.97□□□□□ -0.81
TM9SF3-205ENST00000485093 POTEFA5A3E0 1075 aa9.96□□□□□ -0.82
TM9SF3-205ENST00000485093 ZNF467Q7Z7K2 595 aaPredicted RBP9.95□□□□□ -0.82
TM9SF3-205ENST00000485093 VGFO15240 615 aaPredicted RBP9.94□□□□□ -0.82
TM9SF3-205ENST00000485093 PCDHB8Q9UN66 801 aa9.94□□□□□ -0.82
TM9SF3-205ENST00000485093 PCDHB13Q9Y5F0 798 aa9.94□□□□□ -0.82
TM9SF3-205ENST00000485093 HS6ST3Q8IZP7 471 aa9.93□□□□□ -0.82
TM9SF3-205ENST00000485093 SPNS2Q8IVW8 549 aa9.92□□□□□ -0.82
TM9SF3-205ENST00000485093 ATN1P54259 1190 aaPredicted RBP9.91□□□□□ -0.82
TM9SF3-205ENST00000485093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.89□□□□□ -0.83
TM9SF3-205ENST00000485093 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
TM9SF3-205ENST00000485093 PDAP1Q13442 181 aaKnown RBP9.88□□□□□ -0.83
TM9SF3-205ENST00000485093 TAOK2Q9UL54 1235 aa9.88□□□□□ -0.83
TM9SF3-205ENST00000485093 TRPC6Q9Y210 931 aa9.88□□□□□ -0.83
TM9SF3-205ENST00000485093 BBXQ8WY36 941 aaPredicted RBP9.86□□□□□ -0.83
TM9SF3-205ENST00000485093 PSEN1P49768 467 aa9.85□□□□□ -0.83
TM9SF3-205ENST00000485093 ST18O60284 1047 aa9.84□□□□□ -0.83
TM9SF3-205ENST00000485093 NKX1-1Q15270 411 aaPredicted RBP9.84□□□□□ -0.83
TM9SF3-205ENST00000485093 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
TM9SF3-205ENST00000485093 TIE1P35590 1138 aa9.82□□□□□ -0.84
TM9SF3-205ENST00000485093 BCL11BQ9C0K0 894 aaPredicted RBP9.81□□□□□ -0.84
TM9SF3-205ENST00000485093 STK25O00506 426 aa9.79□□□□□ -0.84
TM9SF3-205ENST00000485093 ILDR1Q86SU0 546 aaPredicted RBP9.79□□□□□ -0.84
TM9SF3-205ENST00000485093 BMP2KQ9NSY1 1161 aaPredicted RBP9.79□□□□□ -0.84
TM9SF3-205ENST00000485093 TTLL13PA6NNM8 815 aa9.78□□□□□ -0.84
TM9SF3-205ENST00000485093 DCAF8L2P0C7V8 631 aa9.76□□□□□ -0.85
TM9SF3-205ENST00000485093 GTPBP6O43824 516 aaPredicted RBP9.75□□□□□ -0.85
TM9SF3-205ENST00000485093 TMEM106CQ9BVX2 250 aa9.74□□□□□ -0.85
TM9SF3-205ENST00000485093 COLQQ9Y215 455 aaPredicted RBP9.74□□□□□ -0.85
TM9SF3-205ENST00000485093 STK24Q9Y6E0 443 aa9.74□□□□□ -0.85
TM9SF3-205ENST00000485093 PLCB2Q00722 1185 aa9.73□□□□□ -0.85
TM9SF3-205ENST00000485093 FBXO22Q8NEZ5 403 aa9.71□□□□□ -0.86
TM9SF3-205ENST00000485093 MFRPQ9BY79 579 aa9.71□□□□□ -0.86
TM9SF3-205ENST00000485093 SOX12O15370 315 aa9.7□□□□□ -0.86
TM9SF3-205ENST00000485093 EFCAB3Q8N7B9 438 aa9.7□□□□□ -0.86
TM9SF3-205ENST00000485093 TMEM121BQ9BXQ6 578 aaPredicted RBP9.69□□□□□ -0.86
TM9SF3-205ENST00000485093 SLAIN1Q8ND83 568 aa9.68□□□□□ -0.86
TM9SF3-205ENST00000485093 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
TM9SF3-205ENST00000485093 SPRYD3Q8NCJ5 442 aa9.66□□□□□ -0.86
TM9SF3-205ENST00000485093 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.66□□□□□ -0.86
TM9SF3-205ENST00000485093 TRIM35Q9UPQ4 493 aa9.66□□□□□ -0.86
TM9SF3-205ENST00000485093 SEC24BO95487 1268 aa9.65□□□□□ -0.86
TM9SF3-205ENST00000485093 MS4A4AQ96JQ5 239 aa9.65□□□□□ -0.86
TM9SF3-205ENST00000485093 IRX5P78411 483 aaPredicted RBP9.64□□□□□ -0.87
TM9SF3-205ENST00000485093 IER5LQ5T953 404 aa9.63□□□□□ -0.87
TM9SF3-205ENST00000485093 PAXIP1Q6ZW49 1069 aaPredicted RBP9.62□□□□□ -0.87
TM9SF3-205ENST00000485093 PHF8Q9UPP1 1060 aa9.62□□□□□ -0.87
TM9SF3-205ENST00000485093 PDCD7Q8N8D1 485 aaKnown RBP9.6□□□□□ -0.87
TM9SF3-205ENST00000485093 PPP1R37O75864 691 aa9.59□□□□□ -0.87
TM9SF3-205ENST00000485093 NLRP6P59044 892 aa9.59□□□□□ -0.87
TM9SF3-205ENST00000485093 RYDENQ9NUL5 291 aaKnown RBP9.59□□□□□ -0.87
TM9SF3-205ENST00000485093 MKRN3Q13064 507 aaKnown RBP9.56□□□□□ -0.88
TM9SF3-205ENST00000485093 CFAP44Q96MT7 982 aa9.55□□□□□ -0.88
TM9SF3-205ENST00000485093 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
TM9SF3-205ENST00000485093 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms