RNA–Protein interactions for RNA: ENST00000484483.1

PTP4A2-205, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-205ENST00000484483 LAMC3Q9Y6N6 1575 aa9.97□□□□□ -0.81
PTP4A2-205ENST00000484483 AKT1S1Q96B36 256 aa9.95□□□□□ -0.82
PTP4A2-205ENST00000484483 AMER1Q5JTC6 1135 aaPredicted RBP9.93□□□□□ -0.82
PTP4A2-205ENST00000484483 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
PTP4A2-205ENST00000484483 STAG3Q9UJ98 1225 aa9.92□□□□□ -0.82
PTP4A2-205ENST00000484483 FANCD2Q9BXW9 1451 aa9.91□□□□□ -0.82
PTP4A2-205ENST00000484483 REM2Q8IYK8 340 aaPredicted RBP9.89□□□□□ -0.83
PTP4A2-205ENST00000484483 CUX2O14529 1486 aa9.87□□□□□ -0.83
PTP4A2-205ENST00000484483 CEP164Q9UPV0 1460 aa9.87□□□□□ -0.83
PTP4A2-205ENST00000484483 MIER1Q8N108 512 aa9.85□□□□□ -0.83
PTP4A2-205ENST00000484483 SPDYE1Q8NFV5 336 aaPredicted RBP9.85□□□□□ -0.83
PTP4A2-205ENST00000484483 CLEC11AQ9Y240 323 aa9.85□□□□□ -0.83
PTP4A2-205ENST00000484483 MRC2Q9UBG0 1479 aa9.85□□□□□ -0.83
PTP4A2-205ENST00000484483 PLCD3Q8N3E9 789 aa9.84□□□□□ -0.83
PTP4A2-205ENST00000484483 KLHL34Q8N239 644 aa9.81□□□□□ -0.84
PTP4A2-205ENST00000484483 URB2Q14146 1524 aaKnown RBP9.79□□□□□ -0.84
PTP4A2-205ENST00000484483 KIF21AQ7Z4S6 1674 aa9.79□□□□□ -0.84
PTP4A2-205ENST00000484483 THOC2Q8NI27 1593 aaKnown RBP9.79□□□□□ -0.84
PTP4A2-205ENST00000484483 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
PTP4A2-205ENST00000484483 WDR62O43379 1518 aa9.77□□□□□ -0.84
PTP4A2-205ENST00000484483 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
PTP4A2-205ENST00000484483 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
PTP4A2-205ENST00000484483 TOPBP1Q92547 1522 aa9.74□□□□□ -0.85
PTP4A2-205ENST00000484483 SPOCK2Q92563 424 aa9.73□□□□□ -0.85
PTP4A2-205ENST00000484483 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
PTP4A2-205ENST00000484483 CREBZFQ9NS37 354 aa9.7□□□□□ -0.86
PTP4A2-205ENST00000484483 SOGA1O94964 1423 aa9.69□□□□□ -0.86
PTP4A2-205ENST00000484483 IFT140Q96RY7 1462 aa9.69□□□□□ -0.86
PTP4A2-205ENST00000484483 DNAJC5Q9H3Z4 198 aa9.68□□□□□ -0.86
PTP4A2-205ENST00000484483 DNMBPQ6XZF7 1577 aa9.67□□□□□ -0.86
PTP4A2-205ENST00000484483 CUX1P39880 1505 aa9.66□□□□□ -0.86
PTP4A2-205ENST00000484483 PKD2Q13563 968 aa9.66□□□□□ -0.86
PTP4A2-205ENST00000484483 POLA1P09884 1462 aaPredicted RBP9.66□□□□□ -0.86
PTP4A2-205ENST00000484483 RAD54L2Q9Y4B4 1467 aa9.66□□□□□ -0.86
PTP4A2-205ENST00000484483 WRNQ14191 1432 aaPredicted RBP eCLIP9.65□□□□□ -0.86
PTP4A2-205ENST00000484483 PRDM2Q13029 1718 aa9.65□□□□□ -0.86
PTP4A2-205ENST00000484483 TDRD9Q8NDG6 1382 aaKnown RBP9.65□□□□□ -0.86
PTP4A2-205ENST00000484483 ZNF608Q9ULD9 1512 aaPredicted RBP9.65□□□□□ -0.86
PTP4A2-205ENST00000484483 ZBTB47Q9UFB7 747 aaPredicted RBP9.64□□□□□ -0.87
PTP4A2-205ENST00000484483 FGD5Q6ZNL6 1462 aa9.64□□□□□ -0.87
PTP4A2-205ENST00000484483 AQRO60306 1485 aaKnown RBP eCLIP9.63□□□□□ -0.876e-8■□□□□ 9.2
PTP4A2-205ENST00000484483 MNX1P50219 401 aaPredicted RBP9.62□□□□□ -0.87
PTP4A2-205ENST00000484483 CHADLQ6NUI6 762 aa9.62□□□□□ -0.87
PTP4A2-205ENST00000484483 NUBP1P53384 320 aa9.58□□□□□ -0.88
PTP4A2-205ENST00000484483 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
PTP4A2-205ENST00000484483 TARBP1Q13395 1621 aaKnown RBP9.56□□□□□ -0.88
PTP4A2-205ENST00000484483 CHRDL2Q6WN34 429 aa9.56□□□□□ -0.88
PTP4A2-205ENST00000484483 FXR2P51116 673 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTP4A2-205ENST00000484483 CHMP7Q8WUX9 453 aaPredicted RBP9.55□□□□□ -0.88
PTP4A2-205ENST00000484483 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
PTP4A2-205ENST00000484483 ABCA10Q8WWZ4 1543 aa9.55□□□□□ -0.88
PTP4A2-205ENST00000484483 SYNJ1O43426 1573 aa9.54□□□□□ -0.88
PTP4A2-205ENST00000484483 TOP2BQ02880 1626 aa9.54□□□□□ -0.88
PTP4A2-205ENST00000484483 ECM2O94769 699 aaPredicted RBP9.54□□□□□ -0.88
PTP4A2-205ENST00000484483 GAPVD1Q14C86 1478 aa9.53□□□□□ -0.88
PTP4A2-205ENST00000484483 PRKAR2AP13861 404 aaKnown RBP9.53□□□□□ -0.88
PTP4A2-205ENST00000484483 GRIN2BQ13224 1484 aa9.53□□□□□ -0.88
PTP4A2-205ENST00000484483 DCAF8Q5TAQ9 597 aa9.51□□□□□ -0.89
PTP4A2-205ENST00000484483 RASEFQ8IZ41 740 aa9.51□□□□□ -0.89
PTP4A2-205ENST00000484483 PIP4P2Q8N4L2 257 aa9.5□□□□□ -0.89
PTP4A2-205ENST00000484483 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
PTP4A2-205ENST00000484483 EIF4G3O43432 1585 aaKnown RBP9.5□□□□□ -0.89
PTP4A2-205ENST00000484483 BIVM-ERCC5R4GMW8 1640 aa9.49□□□□□ -0.89
PTP4A2-205ENST00000484483 SNAPC4Q5SXM2 1469 aa9.49□□□□□ -0.89
PTP4A2-205ENST00000484483 IGF1RP08069 1367 aa9.49□□□□□ -0.89
PTP4A2-205ENST00000484483 RGL2O15211 777 aa9.48□□□□□ -0.89
PTP4A2-205ENST00000484483 NPM1P06748 294 aaKnown RBP eCLIP9.48□□□□□ -0.89
PTP4A2-205ENST00000484483 KIF27Q86VH2 1401 aa9.48□□□□□ -0.89
PTP4A2-205ENST00000484483 WDR97A6NE52 1622 aa9.47□□□□□ -0.89
PTP4A2-205ENST00000484483 GSE1Q14687 1217 aa9.47□□□□□ -0.89
PTP4A2-205ENST00000484483 MAGI1Q96QZ7 1491 aaPredicted RBP9.47□□□□□ -0.89
PTP4A2-205ENST00000484483 FAM212AQ96EL1 285 aa9.45□□□□□ -0.9
PTP4A2-205ENST00000484483 FHAD1B1AJZ9 1412 aa9.44□□□□□ -0.9
PTP4A2-205ENST00000484483 SYNJ2O15056 1496 aa9.44□□□□□ -0.9
PTP4A2-205ENST00000484483 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
PTP4A2-205ENST00000484483 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
PTP4A2-205ENST00000484483 CARMIL1Q5VZK9 1371 aa9.41□□□□□ -0.9
PTP4A2-205ENST00000484483 TSPYL2Q9H2G4 693 aaPredicted RBP9.41□□□□□ -0.9
PTP4A2-205ENST00000484483 RUSC2Q8N2Y8 1516 aa9.39□□□□□ -0.91
PTP4A2-205ENST00000484483 RNF25Q96BH1 459 aaPredicted RBP9.38□□□□□ -0.91
PTP4A2-205ENST00000484483 JPH4Q96JJ6 628 aa9.38□□□□□ -0.91
PTP4A2-205ENST00000484483 GRIN2AQ12879 1464 aa9.38□□□□□ -0.91
PTP4A2-205ENST00000484483 PYGBP11216 843 aa9.37□□□□□ -0.91
PTP4A2-205ENST00000484483 CYB5RLQ6IPT4 315 aa9.37□□□□□ -0.91
PTP4A2-205ENST00000484483 FAM9AQ8IZU1 332 aaPredicted RBP9.36□□□□□ -0.91
PTP4A2-205ENST00000484483 NUP160Q12769 1436 aa9.36□□□□□ -0.91
PTP4A2-205ENST00000484483 ADAMTS12P58397 1594 aa9.34□□□□□ -0.91
PTP4A2-205ENST00000484483 PBRM1Q86U86 1689 aa9.33□□□□□ -0.92
PTP4A2-205ENST00000484483 CHRM1P11229 460 aaPredicted RBP9.33□□□□□ -0.92
PTP4A2-205ENST00000484483 CHD1O14646 1710 aa9.32□□□□□ -0.92
PTP4A2-205ENST00000484483 ARHGEF11O15085 1522 aa9.31□□□□□ -0.92
PTP4A2-205ENST00000484483 RAPGEF2Q9Y4G8 1499 aa9.31□□□□□ -0.92
PTP4A2-205ENST00000484483 CLASP1Q7Z460 1538 aa9.31□□□□□ -0.92
PTP4A2-205ENST00000484483 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
PTP4A2-205ENST00000484483 CHGAP10645 457 aaKnown RBP9.3□□□□□ -0.92
PTP4A2-205ENST00000484483 CCDC61Q9Y6R9 512 aa9.3□□□□□ -0.92
PTP4A2-205ENST00000484483 SLC24A1O60721 1099 aa9.29□□□□□ -0.92
PTP4A2-205ENST00000484483 KIAA0586Q9BVV6 1533 aa9.29□□□□□ -0.92
PTP4A2-205ENST00000484483 EEA1Q15075 1411 aa9.29□□□□□ -0.92
PTP4A2-205ENST00000484483 CEP170Q5SW79 1584 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms