RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
SSBP1-211ENST00000484178 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-211ENST00000484178 RASEFQ8IZ41 740 aa12.7□□□□□ -0.38
SSBP1-211ENST00000484178 KIF12Q96FN5 646 aa12.7□□□□□ -0.38
SSBP1-211ENST00000484178 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-211ENST00000484178 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
SSBP1-211ENST00000484178 NUBP1P53384 320 aa12.63□□□□□ -0.39
SSBP1-211ENST00000484178 FBXO3Q9UK99 471 aa12.63□□□□□ -0.39
SSBP1-211ENST00000484178 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
SSBP1-211ENST00000484178 MAP3K13O43283 966 aa12.59□□□□□ -0.39
SSBP1-211ENST00000484178 C7P10643 843 aa12.59□□□□□ -0.39
SSBP1-211ENST00000484178 SLC39A7Q92504 469 aa12.59□□□□□ -0.39
SSBP1-211ENST00000484178 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
SSBP1-211ENST00000484178 TIE1P35590 1138 aa12.56□□□□□ -0.4
SSBP1-211ENST00000484178 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
SSBP1-211ENST00000484178 OTUD5Q96G74 571 aa12.54□□□□□ -0.4
SSBP1-211ENST00000484178 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-211ENST00000484178 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
SSBP1-211ENST00000484178 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-211ENST00000484178 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
SSBP1-211ENST00000484178 PCDHB13Q9Y5F0 798 aa12.46□□□□□ -0.41
SSBP1-211ENST00000484178 TTLL13PA6NNM8 815 aa12.44□□□□□ -0.42
SSBP1-211ENST00000484178 VASPP50552 380 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-211ENST00000484178 POTEJP0CG39 1038 aa12.41□□□□□ -0.42
SSBP1-211ENST00000484178 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
SSBP1-211ENST00000484178 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
SSBP1-211ENST00000484178 POTEFA5A3E0 1075 aa12.39□□□□□ -0.43
SSBP1-211ENST00000484178 IER5LQ5T953 404 aa12.38□□□□□ -0.43
SSBP1-211ENST00000484178 DCAF8Q5TAQ9 597 aa12.37□□□□□ -0.43
SSBP1-211ENST00000484178 TRIM35Q9UPQ4 493 aa12.35□□□□□ -0.43
SSBP1-211ENST00000484178 GSE1Q14687 1217 aa12.31□□□□□ -0.44
SSBP1-211ENST00000484178 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
SSBP1-211ENST00000484178 SCUBE2Q9NQ36 999 aa12.3□□□□□ -0.44
SSBP1-211ENST00000484178 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-211ENST00000484178 PYGBP11216 843 aa12.29□□□□□ -0.44
SSBP1-211ENST00000484178 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
SSBP1-211ENST00000484178 SEC24BO95487 1268 aa12.28□□□□□ -0.44
SSBP1-211ENST00000484178 CHRM1P11229 460 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-211ENST00000484178 ZNF467Q7Z7K2 595 aaPredicted RBP12.21□□□□□ -0.45
SSBP1-211ENST00000484178 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
SSBP1-211ENST00000484178 IRX5P78411 483 aaPredicted RBP12.2□□□□□ -0.46
SSBP1-211ENST00000484178 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
SSBP1-211ENST00000484178 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
SSBP1-211ENST00000484178 PLCG2P16885 1265 aa12.16□□□□□ -0.46
SSBP1-211ENST00000484178 POTEMA6NI47 508 aa12.15□□□□□ -0.46
SSBP1-211ENST00000484178 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
SSBP1-211ENST00000484178 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
SSBP1-211ENST00000484178 LCE2DQ5TA82 110 aaPredicted RBP12.11□□□□□ -0.47
SSBP1-211ENST00000484178 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
SSBP1-211ENST00000484178 PSEN1P49768 467 aa12.05□□□□□ -0.48
SSBP1-211ENST00000484178 FAM163AQ96GL9 167 aaPredicted RBP12.05□□□□□ -0.48
SSBP1-211ENST00000484178 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
SSBP1-211ENST00000484178 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-211ENST00000484178 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
SSBP1-211ENST00000484178 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
SSBP1-211ENST00000484178 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
SSBP1-211ENST00000484178 GOLGA2Q08379 1002 aa12.01□□□□□ -0.49
SSBP1-211ENST00000484178 MKRN3Q13064 507 aaKnown RBP12.01□□□□□ -0.49
SSBP1-211ENST00000484178 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
SSBP1-211ENST00000484178 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
SSBP1-211ENST00000484178 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.95□□□□□ -0.5
SSBP1-211ENST00000484178 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
SSBP1-211ENST00000484178 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.52e-7■■□□□ 12.8
SSBP1-211ENST00000484178 SNPHO15079 494 aa11.89□□□□□ -0.51
SSBP1-211ENST00000484178 ST18O60284 1047 aa11.89□□□□□ -0.51
SSBP1-211ENST00000484178 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
SSBP1-211ENST00000484178 TMEM121BQ9BXQ6 578 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-211ENST00000484178 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
SSBP1-211ENST00000484178 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
SSBP1-211ENST00000484178 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
SSBP1-211ENST00000484178 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
SSBP1-211ENST00000484178 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-211ENST00000484178 BOLA1Q9Y3E2 137 aa11.78□□□□□ -0.52
SSBP1-211ENST00000484178 EFCAB3Q8N7B9 438 aa11.76□□□□□ -0.53
SSBP1-211ENST00000484178 VGFO15240 615 aaPredicted RBP11.75□□□□□ -0.53
SSBP1-211ENST00000484178 SOX12O15370 315 aa11.73□□□□□ -0.53
SSBP1-211ENST00000484178 G3V3G9 751 aa11.72□□□□□ -0.53
SSBP1-211ENST00000484178 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-211ENST00000484178 ZFP91Q96JP5 570 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-211ENST00000484178 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
SSBP1-211ENST00000484178 MARVELD3Q96A59 401 aa11.63□□□□□ -0.55
SSBP1-211ENST00000484178 HOXB3P14651 431 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-211ENST00000484178 MS4A4AQ96JQ5 239 aa11.62□□□□□ -0.55
SSBP1-211ENST00000484178 MICALL2Q8IY33 904 aa11.61□□□□□ -0.55
SSBP1-211ENST00000484178 EMP3P54852 163 aa11.59□□□□□ -0.55
SSBP1-211ENST00000484178 PHF8Q9UPP1 1060 aa11.58□□□□□ -0.56
SSBP1-211ENST00000484178 NLRP6P59044 892 aa11.56□□□□□ -0.56
SSBP1-211ENST00000484178 DOK7Q18PE1 504 aa11.56□□□□□ -0.56
SSBP1-211ENST00000484178 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
SSBP1-211ENST00000484178 HOXB1P14653 301 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-211ENST00000484178 PKD2Q13563 968 aa11.55□□□□□ -0.56
SSBP1-211ENST00000484178 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
SSBP1-211ENST00000484178 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
SSBP1-211ENST00000484178 TMEM92Q6UXU6 159 aa11.54□□□□□ -0.56
SSBP1-211ENST00000484178 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
SSBP1-211ENST00000484178 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
SSBP1-211ENST00000484178 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
SSBP1-211ENST00000484178 ZNF710Q8N1W2 664 aa11.51□□□□□ -0.57
SSBP1-211ENST00000484178 ZSWIM6Q9HCJ5 1215 aa11.51□□□□□ -0.57
SSBP1-211ENST00000484178 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms