RNA–Protein interactions for RNA: ENST00000484042.1

FXR1-217, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-217ENST00000484042 POTEB2H3BUK9 544 aa14.6□□□□□ -0.07
FXR1-217ENST00000484042 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
FXR1-217ENST00000484042 ASTLQ6HA08 431 aaPredicted RBP14.57□□□□□ -0.08
FXR1-217ENST00000484042 ATMINO43313 823 aaPredicted RBP14.55□□□□□ -0.08
FXR1-217ENST00000484042 KIF12Q96FN5 646 aa14.55□□□□□ -0.08
FXR1-217ENST00000484042 RASEFQ8IZ41 740 aa14.54□□□□□ -0.08
FXR1-217ENST00000484042 OTUD5Q96G74 571 aa14.53□□□□□ -0.08
FXR1-217ENST00000484042 PLCD3Q8N3E9 789 aa14.52□□□□□ -0.09
FXR1-217ENST00000484042 METRNQ9UJH8 293 aa14.48□□□□□ -0.09
FXR1-217ENST00000484042 C7P10643 843 aa14.46□□□□□ -0.09
FXR1-217ENST00000484042 VASPP50552 380 aaPredicted RBP14.46□□□□□ -0.09
FXR1-217ENST00000484042 SLC39A7Q92504 469 aa14.46□□□□□ -0.09
FXR1-217ENST00000484042 MAP3K13O43283 966 aa14.45□□□□□ -0.1
FXR1-217ENST00000484042 ATN1P54259 1190 aaPredicted RBP14.44□□□□□ -0.1
FXR1-217ENST00000484042 TRPC6Q9Y210 931 aa14.44□□□□□ -0.1
FXR1-217ENST00000484042 BMP2KQ9NSY1 1161 aaPredicted RBP14.4□□□□□ -0.1
FXR1-217ENST00000484042 NUBP1P53384 320 aa14.39□□□□□ -0.11
FXR1-217ENST00000484042 POTEJP0CG39 1038 aa14.38□□□□□ -0.11
FXR1-217ENST00000484042 ZBTB47Q9UFB7 747 aaPredicted RBP14.38□□□□□ -0.11
FXR1-217ENST00000484042 TIE1P35590 1138 aa14.34□□□□□ -0.11
FXR1-217ENST00000484042 POTEFA5A3E0 1075 aa14.29□□□□□ -0.12
FXR1-217ENST00000484042 SGIP1Q9BQI5 828 aa14.29□□□□□ -0.12
FXR1-217ENST00000484042 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
FXR1-217ENST00000484042 PCDHB13Q9Y5F0 798 aa14.28□□□□□ -0.12
FXR1-217ENST00000484042 IFNLR1Q8IU57 520 aaPredicted RBP14.27□□□□□ -0.13
FXR1-217ENST00000484042 MAMSTRQ6ZN01 415 aa14.25□□□□□ -0.13
FXR1-217ENST00000484042 FAM212AQ96EL1 285 aa14.24□□□□□ -0.13
FXR1-217ENST00000484042 IFNL1Q8IU54 200 aa14.21□□□□□ -0.13
FXR1-217ENST00000484042 COLQQ9Y215 455 aaPredicted RBP14.19□□□□□ -0.14
FXR1-217ENST00000484042 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
FXR1-217ENST00000484042 TRIM35Q9UPQ4 493 aa14.18□□□□□ -0.14
FXR1-217ENST00000484042 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
FXR1-217ENST00000484042 DCAF8Q5TAQ9 597 aa14.16□□□□□ -0.14
FXR1-217ENST00000484042 SEC24BO95487 1268 aa14.15□□□□□ -0.14
FXR1-217ENST00000484042 POTEMA6NI47 508 aa14.14□□□□□ -0.15
FXR1-217ENST00000484042 IER5LQ5T953 404 aa14.12□□□□□ -0.15
FXR1-217ENST00000484042 POTEGQ6S5H5 508 aa14.11□□□□□ -0.15
FXR1-217ENST00000484042 TMEM106CQ9BVX2 250 aa14.11□□□□□ -0.15
FXR1-217ENST00000484042 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
FXR1-217ENST00000484042 PLSCR2Q9NRY7 297 aa14.11□□□□□ -0.15
FXR1-217ENST00000484042 KLHL34Q8N239 644 aa14.1□□□□□ -0.15
FXR1-217ENST00000484042 PYGBP11216 843 aa14.09□□□□□ -0.15
FXR1-217ENST00000484042 SPOCK2Q92563 424 aa14.07□□□□□ -0.16
FXR1-217ENST00000484042 LCE2DQ5TA82 110 aaPredicted RBP14.04□□□□□ -0.16
FXR1-217ENST00000484042 FAM163AQ96GL9 167 aaPredicted RBP14.04□□□□□ -0.16
FXR1-217ENST00000484042 PCDHB8Q9UN66 801 aa14.02□□□□□ -0.17
FXR1-217ENST00000484042 IRX5P78411 483 aaPredicted RBP13.97□□□□□ -0.17
FXR1-217ENST00000484042 PLCG2P16885 1265 aa13.96□□□□□ -0.17
FXR1-217ENST00000484042 GSE1Q14687 1217 aa13.95□□□□□ -0.18
FXR1-217ENST00000484042 OCEL1Q9H607 264 aa13.9□□□□□ -0.18
FXR1-217ENST00000484042 PCDH10Q9P2E7 1040 aa13.9□□□□□ -0.18
FXR1-217ENST00000484042 SLAIN1Q8ND83 568 aa13.88□□□□□ -0.19
FXR1-217ENST00000484042 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
FXR1-217ENST00000484042 PKD2Q13563 968 aa13.86□□□□□ -0.19
FXR1-217ENST00000484042 ZNF467Q7Z7K2 595 aaPredicted RBP13.86□□□□□ -0.19
FXR1-217ENST00000484042 PSEN1P49768 467 aa13.77□□□□□ -0.21
FXR1-217ENST00000484042 CIZ1Q9ULV3 898 aaPredicted RBP13.76□□□□□ -0.21
FXR1-217ENST00000484042 ST18O60284 1047 aa13.75□□□□□ -0.21
FXR1-217ENST00000484042 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
FXR1-217ENST00000484042 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
FXR1-217ENST00000484042 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
FXR1-217ENST00000484042 GOLGA2Q08379 1002 aa13.73□□□□□ -0.21
FXR1-217ENST00000484042 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.73□□□□□ -0.21
FXR1-217ENST00000484042 ECM2O94769 699 aaPredicted RBP13.71□□□□□ -0.21
FXR1-217ENST00000484042 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
FXR1-217ENST00000484042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.68□□□□□ -0.222e-10■□□□□ 10.4
FXR1-217ENST00000484042 CDAN1Q8IWY9 1227 aa13.67□□□□□ -0.22
FXR1-217ENST00000484042 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.22
FXR1-217ENST00000484042 SNPHO15079 494 aa13.62□□□□□ -0.23
FXR1-217ENST00000484042 ILDR1Q86SU0 546 aaPredicted RBP13.62□□□□□ -0.23
FXR1-217ENST00000484042 C3orf67Q6ZVT6 689 aa13.6□□□□□ -0.23
FXR1-217ENST00000484042 CABP2Q9NPB3 220 aa13.6□□□□□ -0.23
FXR1-217ENST00000484042 RGL2O15211 777 aa13.58□□□□□ -0.24
FXR1-217ENST00000484042 DPY19L2Q6NUT2 758 aa13.58□□□□□ -0.24
FXR1-217ENST00000484042 TMEM121BQ9BXQ6 578 aaPredicted RBP13.57□□□□□ -0.24
FXR1-217ENST00000484042 RNF25Q96BH1 459 aaPredicted RBP13.53□□□□□ -0.24
FXR1-217ENST00000484042 MARVELD3Q96A59 401 aa13.52□□□□□ -0.25
FXR1-217ENST00000484042 RIOK3O14730 519 aaKnown RBP13.47□□□□□ -0.25
FXR1-217ENST00000484042 BOLA1Q9Y3E2 137 aa13.47□□□□□ -0.25
FXR1-217ENST00000484042 DCAF8L2P0C7V8 631 aa13.45□□□□□ -0.26
FXR1-217ENST00000484042 EFCAB3Q8N7B9 438 aa13.44□□□□□ -0.26
FXR1-217ENST00000484042 G3V3G9 751 aa13.43□□□□□ -0.26
FXR1-217ENST00000484042 TAOK2Q9UL54 1235 aa13.41□□□□□ -0.26
FXR1-217ENST00000484042 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
FXR1-217ENST00000484042 EMP3P54852 163 aa13.38□□□□□ -0.27
FXR1-217ENST00000484042 POTEB3A0JP26 581 aa13.34□□□□□ -0.27
FXR1-217ENST00000484042 HOXB3P14651 431 aaPredicted RBP13.34□□□□□ -0.27
FXR1-217ENST00000484042 POTEBQ6S5H4 581 aa13.34□□□□□ -0.27
FXR1-217ENST00000484042 SPNS2Q8IVW8 549 aa13.34□□□□□ -0.27
FXR1-217ENST00000484042 HS6ST3Q8IZP7 471 aa13.34□□□□□ -0.27
FXR1-217ENST00000484042 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
FXR1-217ENST00000484042 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
FXR1-217ENST00000484042 ZFP91Q96JP5 570 aaPredicted RBP13.32□□□□□ -0.28
FXR1-217ENST00000484042 HS3ST6Q96QI5 342 aa13.31□□□□□ -0.28
FXR1-217ENST00000484042 CHGAP10645 457 aaKnown RBP13.3□□□□□ -0.28
FXR1-217ENST00000484042 MMRN1Q13201 1228 aa13.3□□□□□ -0.28
FXR1-217ENST00000484042 SOX12O15370 315 aa13.29□□□□□ -0.28
FXR1-217ENST00000484042 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
FXR1-217ENST00000484042 BBXQ8WY36 941 aaPredicted RBP13.27□□□□□ -0.29
FXR1-217ENST00000484042 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms