RNA–Protein interactions for RNA: ENST00000483831.1

ABCB1-206, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 642 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-206ENST00000483831 PCDH10Q9P2E7 1040 aa15.06■□□□□ 0
ABCB1-206ENST00000483831 C7P10643 843 aa15.05■□□□□ -0
ABCB1-206ENST00000483831 MS4A3Q96HJ5 214 aa15.04■□□□□ -0
ABCB1-206ENST00000483831 ATMINO43313 823 aaPredicted RBP15.02■□□□□ -0
ABCB1-206ENST00000483831 MAMSTRQ6ZN01 415 aa15.02■□□□□ -0
ABCB1-206ENST00000483831 POTEJP0CG39 1038 aa14.95□□□□□ -0.02
ABCB1-206ENST00000483831 SCUBE2Q9NQ36 999 aa14.89□□□□□ -0.03
ABCB1-206ENST00000483831 TSPYL2Q9H2G4 693 aaPredicted RBP14.87□□□□□ -0.03
ABCB1-206ENST00000483831 ATN1P54259 1190 aaPredicted RBP14.85□□□□□ -0.03
ABCB1-206ENST00000483831 FAM163AQ96GL9 167 aaPredicted RBP14.83□□□□□ -0.04
ABCB1-206ENST00000483831 CCDC61Q9Y6R9 512 aa14.83□□□□□ -0.04
ABCB1-206ENST00000483831 LCE2DQ5TA82 110 aaPredicted RBP14.81□□□□□ -0.04
ABCB1-206ENST00000483831 KIF12Q96FN5 646 aa14.78□□□□□ -0.04
ABCB1-206ENST00000483831 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
ABCB1-206ENST00000483831 POTEFA5A3E0 1075 aa14.71□□□□□ -0.05
ABCB1-206ENST00000483831 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
ABCB1-206ENST00000483831 TIE1P35590 1138 aa14.7□□□□□ -0.06
ABCB1-206ENST00000483831 PROM2Q8N271 834 aa14.7□□□□□ -0.06
ABCB1-206ENST00000483831 MAP3K13O43283 966 aa14.66□□□□□ -0.06
ABCB1-206ENST00000483831 TRPC6Q9Y210 931 aa14.66□□□□□ -0.06
ABCB1-206ENST00000483831 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
ABCB1-206ENST00000483831 SEC24BO95487 1268 aa14.62□□□□□ -0.07
ABCB1-206ENST00000483831 TTLL13PA6NNM8 815 aa14.58□□□□□ -0.08
ABCB1-206ENST00000483831 COLQQ9Y215 455 aaPredicted RBP14.57□□□□□ -0.08
ABCB1-206ENST00000483831 RASEFQ8IZ41 740 aa14.56□□□□□ -0.08
ABCB1-206ENST00000483831 MIER1Q8N108 512 aa14.55□□□□□ -0.08
ABCB1-206ENST00000483831 IER5LQ5T953 404 aa14.54□□□□□ -0.08
ABCB1-206ENST00000483831 CDAN1Q8IWY9 1227 aa14.54□□□□□ -0.08
ABCB1-206ENST00000483831 SGIP1Q9BQI5 828 aa14.51□□□□□ -0.09
ABCB1-206ENST00000483831 TRIM35Q9UPQ4 493 aa14.49□□□□□ -0.09
ABCB1-206ENST00000483831 PCDHB13Q9Y5F0 798 aa14.45□□□□□ -0.1
ABCB1-206ENST00000483831 SLAIN1Q8ND83 568 aa14.43□□□□□ -0.1
ABCB1-206ENST00000483831 ST18O60284 1047 aa14.39□□□□□ -0.11
ABCB1-206ENST00000483831 PLCD3Q8N3E9 789 aa14.37□□□□□ -0.11
ABCB1-206ENST00000483831 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
ABCB1-206ENST00000483831 PLCG2P16885 1265 aa14.34□□□□□ -0.11
ABCB1-206ENST00000483831 IFNL1Q8IU54 200 aa14.33□□□□□ -0.12
ABCB1-206ENST00000483831 TMEM106CQ9BVX2 250 aa14.33□□□□□ -0.12
ABCB1-206ENST00000483831 NUBP1P53384 320 aa14.3□□□□□ -0.12
ABCB1-206ENST00000483831 FAM212AQ96EL1 285 aa14.26□□□□□ -0.13
ABCB1-206ENST00000483831 IRX5P78411 483 aaPredicted RBP14.25□□□□□ -0.13
ABCB1-206ENST00000483831 TMEM121BQ9BXQ6 578 aaPredicted RBP14.25□□□□□ -0.13
ABCB1-206ENST00000483831 SNPHO15079 494 aa14.22□□□□□ -0.13
ABCB1-206ENST00000483831 MMRN1Q13201 1228 aa14.2□□□□□ -0.14
ABCB1-206ENST00000483831 OCEL1Q9H607 264 aa14.2□□□□□ -0.14
ABCB1-206ENST00000483831 SPNS2Q8IVW8 549 aa14.19□□□□□ -0.14
ABCB1-206ENST00000483831 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.15□□□□□ -0.14
ABCB1-206ENST00000483831 MARVELD3Q96A59 401 aa14.08□□□□□ -0.16
ABCB1-206ENST00000483831 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
ABCB1-206ENST00000483831 PYGBP11216 843 aa14.04□□□□□ -0.16
ABCB1-206ENST00000483831 PCDHB8Q9UN66 801 aa14□□□□□ -0.17
ABCB1-206ENST00000483831 EMP3P54852 163 aa13.97□□□□□ -0.17
ABCB1-206ENST00000483831 C3orf67Q6ZVT6 689 aa13.97□□□□□ -0.17
ABCB1-206ENST00000483831 L3MBTL3Q96JM7 780 aaPredicted RBP13.95□□□□□ -0.18
ABCB1-206ENST00000483831 PDCD7Q8N8D1 485 aaKnown RBP13.94□□□□□ -0.18
ABCB1-206ENST00000483831 GOLGA2Q08379 1002 aa13.92□□□□□ -0.18
ABCB1-206ENST00000483831 MKRN3Q13064 507 aaKnown RBP13.9□□□□□ -0.18
ABCB1-206ENST00000483831 ZNF467Q7Z7K2 595 aaPredicted RBP13.88□□□□□ -0.19
ABCB1-206ENST00000483831 HS3ST6Q96QI5 342 aa13.88□□□□□ -0.19
ABCB1-206ENST00000483831 KRTAP3-3Q9BYR6 98 aa13.86□□□□□ -0.19
ABCB1-206ENST00000483831 KRTAP3-2Q9BYR7 98 aa13.86□□□□□ -0.19
ABCB1-206ENST00000483831 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
ABCB1-206ENST00000483831 POTEB3A0JP26 581 aa13.82□□□□□ -0.2
ABCB1-206ENST00000483831 FKBP8Q14318 412 aa13.82□□□□□ -0.2
ABCB1-206ENST00000483831 POTEBQ6S5H4 581 aa13.82□□□□□ -0.2
ABCB1-206ENST00000483831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
ABCB1-206ENST00000483831 GSE1Q14687 1217 aa13.81□□□□□ -0.2
ABCB1-206ENST00000483831 FBXO3Q9UK99 471 aa13.77□□□□□ -0.21
ABCB1-206ENST00000483831 CHRM1P11229 460 aaPredicted RBP13.75□□□□□ -0.21
ABCB1-206ENST00000483831 PSEN1P49768 467 aa13.74□□□□□ -0.21
ABCB1-206ENST00000483831 NISCHQ9Y2I1 1504 aa13.72□□□□□ -0.21
ABCB1-206ENST00000483831 ILDR1Q86SU0 546 aaPredicted RBP13.71□□□□□ -0.21
ABCB1-206ENST00000483831 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
ABCB1-206ENST00000483831 G3V3G9 751 aa13.69□□□□□ -0.22
ABCB1-206ENST00000483831 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
ABCB1-206ENST00000483831 PDAP1Q13442 181 aaKnown RBP13.64□□□□□ -0.23
ABCB1-206ENST00000483831 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
ABCB1-206ENST00000483831 BOLA1Q9Y3E2 137 aa13.64□□□□□ -0.23
ABCB1-206ENST00000483831 ZNF710Q8N1W2 664 aa13.63□□□□□ -0.23
ABCB1-206ENST00000483831 HOXB1P14653 301 aaPredicted RBP13.62□□□□□ -0.23
ABCB1-206ENST00000483831 DOK7Q18PE1 504 aa13.6□□□□□ -0.23
ABCB1-206ENST00000483831 ERBB3P21860 1342 aa13.6□□□□□ -0.23
ABCB1-206ENST00000483831 VASPP50552 380 aaPredicted RBP13.58□□□□□ -0.24
ABCB1-206ENST00000483831 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
ABCB1-206ENST00000483831 RNF166Q96A37 237 aaPredicted RBP13.56□□□□□ -0.24
ABCB1-206ENST00000483831 RIMBP2O15034 1052 aa13.52□□□□□ -0.25
ABCB1-206ENST00000483831 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
ABCB1-206ENST00000483831 VARS2Q5ST30 1063 aaKnown RBP13.47□□□□□ -0.25
ABCB1-206ENST00000483831 ZSWIM6Q9HCJ5 1215 aa13.43□□□□□ -0.26
ABCB1-206ENST00000483831 ZNF687Q8N1G0 1237 aa13.41□□□□□ -0.26
ABCB1-206ENST00000483831 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
ABCB1-206ENST00000483831 PTGER2P43116 358 aa13.39□□□□□ -0.27
ABCB1-206ENST00000483831 SPOCK2Q92563 424 aa13.39□□□□□ -0.27
ABCB1-206ENST00000483831 EFCAB3Q8N7B9 438 aa13.33□□□□□ -0.28
ABCB1-206ENST00000483831 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
ABCB1-206ENST00000483831 MICALL2Q8IY33 904 aa13.31□□□□□ -0.28
ABCB1-206ENST00000483831 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
ABCB1-206ENST00000483831 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
ABCB1-206ENST00000483831 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
ABCB1-206ENST00000483831 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms