RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 ASTLQ6HA08 431 aaPredicted RBP15.6■□□□□ 0.09
COMMD3-213ENST00000483684 OTUD5Q96G74 571 aa15.6■□□□□ 0.09
COMMD3-213ENST00000483684 POTEB2H3BUK9 544 aa15.57■□□□□ 0.08
COMMD3-213ENST00000483684 ATMINO43313 823 aaPredicted RBP15.55■□□□□ 0.08
COMMD3-213ENST00000483684 FKBP8Q14318 412 aa15.55■□□□□ 0.08
COMMD3-213ENST00000483684 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
COMMD3-213ENST00000483684 KIF12Q96FN5 646 aa15.55■□□□□ 0.08
COMMD3-213ENST00000483684 PLCD3Q8N3E9 789 aa15.51■□□□□ 0.07
COMMD3-213ENST00000483684 SLC39A7Q92504 469 aa15.45■□□□□ 0.06
COMMD3-213ENST00000483684 METRNQ9UJH8 293 aa15.45■□□□□ 0.06
COMMD3-213ENST00000483684 POTEMA6NI47 508 aa15.44■□□□□ 0.06
COMMD3-213ENST00000483684 MAP3K13O43283 966 aa15.44■□□□□ 0.06
COMMD3-213ENST00000483684 C7P10643 843 aa15.43■□□□□ 0.06
COMMD3-213ENST00000483684 ZBTB47Q9UFB7 747 aaPredicted RBP15.43■□□□□ 0.06
COMMD3-213ENST00000483684 NUBP1P53384 320 aa15.42■□□□□ 0.06
COMMD3-213ENST00000483684 ATN1P54259 1190 aaPredicted RBP15.42■□□□□ 0.06
COMMD3-213ENST00000483684 TRPC6Q9Y210 931 aa15.42■□□□□ 0.06
COMMD3-213ENST00000483684 BMP2KQ9NSY1 1161 aaPredicted RBP15.39■□□□□ 0.05
COMMD3-213ENST00000483684 POTEGQ6S5H5 508 aa15.37■□□□□ 0.05
COMMD3-213ENST00000483684 TIE1P35590 1138 aa15.36■□□□□ 0.05
COMMD3-213ENST00000483684 POTEJP0CG39 1038 aa15.35■□□□□ 0.05
COMMD3-213ENST00000483684 SGIP1Q9BQI5 828 aa15.33■□□□□ 0.04
COMMD3-213ENST00000483684 POTEFA5A3E0 1075 aa15.28■□□□□ 0.04
COMMD3-213ENST00000483684 TTLL13PA6NNM8 815 aa15.26■□□□□ 0.03
COMMD3-213ENST00000483684 FBXO3Q9UK99 471 aa15.26■□□□□ 0.03
COMMD3-213ENST00000483684 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
COMMD3-213ENST00000483684 FAM212AQ96EL1 285 aa15.25■□□□□ 0.03
COMMD3-213ENST00000483684 MAMSTRQ6ZN01 415 aa15.2■□□□□ 0.02
COMMD3-213ENST00000483684 IFNL1Q8IU54 200 aa15.2■□□□□ 0.02
COMMD3-213ENST00000483684 TRIM35Q9UPQ4 493 aa15.15■□□□□ 0.02
COMMD3-213ENST00000483684 LCE2DQ5TA82 110 aaPredicted RBP15.14■□□□□ 0.01
COMMD3-213ENST00000483684 COLQQ9Y215 455 aaPredicted RBP15.14■□□□□ 0.01
COMMD3-213ENST00000483684 IER5LQ5T953 404 aa15.12■□□□□ 0.01
COMMD3-213ENST00000483684 DCAF8Q5TAQ9 597 aa15.11■□□□□ 0.01
COMMD3-213ENST00000483684 SCUBE2Q9NQ36 999 aa15.11■□□□□ 0.01
COMMD3-213ENST00000483684 VASPP50552 380 aaPredicted RBP15.09■□□□□ 0.01
COMMD3-213ENST00000483684 PCDH10Q9P2E7 1040 aa15.08■□□□□ 0
COMMD3-213ENST00000483684 SEC24BO95487 1268 aa15.07■□□□□ 0
COMMD3-213ENST00000483684 PYGBP11216 843 aa15.06■□□□□ 0
COMMD3-213ENST00000483684 TMEM106CQ9BVX2 250 aa15.06■□□□□ 0
COMMD3-213ENST00000483684 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
COMMD3-213ENST00000483684 KLHL34Q8N239 644 aa14.98□□□□□ -0.01
COMMD3-213ENST00000483684 IRX5P78411 483 aaPredicted RBP14.96□□□□□ -0.01
COMMD3-213ENST00000483684 GSE1Q14687 1217 aa14.96□□□□□ -0.01
COMMD3-213ENST00000483684 PCDHB8Q9UN66 801 aa14.96□□□□□ -0.01
COMMD3-213ENST00000483684 PLCG2P16885 1265 aa14.9□□□□□ -0.02
COMMD3-213ENST00000483684 CHRM1P11229 460 aaPredicted RBP14.89□□□□□ -0.03
COMMD3-213ENST00000483684 ZNF467Q7Z7K2 595 aaPredicted RBP14.85□□□□□ -0.03
COMMD3-213ENST00000483684 OCEL1Q9H607 264 aa14.85□□□□□ -0.03
COMMD3-213ENST00000483684 IFNLR1Q8IU57 520 aaPredicted RBP14.84□□□□□ -0.03
COMMD3-213ENST00000483684 SLAIN1Q8ND83 568 aa14.79□□□□□ -0.04
COMMD3-213ENST00000483684 SPOCK2Q92563 424 aa14.78□□□□□ -0.04
COMMD3-213ENST00000483684 PDCD7Q8N8D1 485 aaKnown RBP14.73□□□□□ -0.05
COMMD3-213ENST00000483684 PSEN1P49768 467 aa14.72□□□□□ -0.05
COMMD3-213ENST00000483684 CDAN1Q8IWY9 1227 aa14.7□□□□□ -0.06
COMMD3-213ENST00000483684 MKRN3Q13064 507 aaKnown RBP14.68□□□□□ -0.06
COMMD3-213ENST00000483684 CIZ1Q9ULV3 898 aaPredicted RBP14.67□□□□□ -0.06
COMMD3-213ENST00000483684 ST18O60284 1047 aa14.66□□□□□ -0.06
COMMD3-213ENST00000483684 GOLGA2Q08379 1002 aa14.66□□□□□ -0.06
COMMD3-213ENST00000483684 PDAP1Q13442 181 aaKnown RBP14.66□□□□□ -0.06
COMMD3-213ENST00000483684 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.65□□□□□ -0.06
COMMD3-213ENST00000483684 ILDR1Q86SU0 546 aaPredicted RBP14.64□□□□□ -0.07
COMMD3-213ENST00000483684 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.61□□□□□ -0.07
COMMD3-213ENST00000483684 L3MBTL3Q96JM7 780 aaPredicted RBP14.59□□□□□ -0.07
COMMD3-213ENST00000483684 SNPHO15079 494 aa14.54□□□□□ -0.08
COMMD3-213ENST00000483684 CABP2Q9NPB3 220 aa14.53□□□□□ -0.08
COMMD3-213ENST00000483684 C3orf67Q6ZVT6 689 aa14.52□□□□□ -0.09
COMMD3-213ENST00000483684 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
COMMD3-213ENST00000483684 TMEM121BQ9BXQ6 578 aaPredicted RBP14.51□□□□□ -0.09
COMMD3-213ENST00000483684 DPY19L2Q6NUT2 758 aa14.49□□□□□ -0.09
COMMD3-213ENST00000483684 MMRN1Q13201 1228 aa14.41□□□□□ -0.1
COMMD3-213ENST00000483684 BOLA1Q9Y3E2 137 aa14.41□□□□□ -0.1
COMMD3-213ENST00000483684 SPNS2Q8IVW8 549 aa14.38□□□□□ -0.11
COMMD3-213ENST00000483684 EFCAB3Q8N7B9 438 aa14.37□□□□□ -0.11
COMMD3-213ENST00000483684 MARVELD3Q96A59 401 aa14.37□□□□□ -0.11
COMMD3-213ENST00000483684 RNF25Q96BH1 459 aaPredicted RBP14.37□□□□□ -0.11
COMMD3-213ENST00000483684 RIOK3O14730 519 aaKnown RBP14.33□□□□□ -0.12
COMMD3-213ENST00000483684 G3V3G9 751 aa14.32□□□□□ -0.12
COMMD3-213ENST00000483684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.27□□□□□ -0.13
COMMD3-213ENST00000483684 HOXB3P14651 431 aaPredicted RBP14.27□□□□□ -0.13
COMMD3-213ENST00000483684 EMP3P54852 163 aa14.27□□□□□ -0.13
COMMD3-213ENST00000483684 ZFP91Q96JP5 570 aaPredicted RBP14.27□□□□□ -0.13
COMMD3-213ENST00000483684 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
COMMD3-213ENST00000483684 SOX12O15370 315 aa14.25□□□□□ -0.13
COMMD3-213ENST00000483684 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
COMMD3-213ENST00000483684 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
COMMD3-213ENST00000483684 MS4A4AQ96JQ5 239 aa14.22□□□□□ -0.13
COMMD3-213ENST00000483684 HS3ST6Q96QI5 342 aa14.21□□□□□ -0.13
COMMD3-213ENST00000483684 MICALL2Q8IY33 904 aa14.2□□□□□ -0.14
COMMD3-213ENST00000483684 FAM205CA6NFA0 338 aa14.18□□□□□ -0.14
COMMD3-213ENST00000483684 TMEM92Q6UXU6 159 aa14.17□□□□□ -0.14
COMMD3-213ENST00000483684 PHF8Q9UPP1 1060 aa14.17□□□□□ -0.14
COMMD3-213ENST00000483684 HOXB1P14653 301 aaPredicted RBP14.15□□□□□ -0.14
COMMD3-213ENST00000483684 KRTAP3-3Q9BYR6 98 aa14.15□□□□□ -0.14
COMMD3-213ENST00000483684 KRTAP3-2Q9BYR7 98 aa14.15□□□□□ -0.14
COMMD3-213ENST00000483684 DOK7Q18PE1 504 aa14.13□□□□□ -0.15
COMMD3-213ENST00000483684 ZNF710Q8N1W2 664 aa14.11□□□□□ -0.15
COMMD3-213ENST00000483684 FBXO22Q8NEZ5 403 aa14.08□□□□□ -0.16
COMMD3-213ENST00000483684 BCL11BQ9C0K0 894 aaPredicted RBP14.08□□□□□ -0.16
COMMD3-213ENST00000483684 TAOK2Q9UL54 1235 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms