RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 DCAF8Q5TAQ9 597 aa12.27□□□□□ -0.45
MSL3-216ENST00000483645 CLCN6P51797 869 aa12.25□□□□□ -0.45
MSL3-216ENST00000483645 GSE1Q14687 1217 aa12.25□□□□□ -0.45
MSL3-216ENST00000483645 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
MSL3-216ENST00000483645 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
MSL3-216ENST00000483645 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
MSL3-216ENST00000483645 PHF12Q96QT6 1004 aa12.18□□□□□ -0.46
MSL3-216ENST00000483645 GABBR2O75899 941 aa12.15□□□□□ -0.46
MSL3-216ENST00000483645 KIF12Q96FN5 646 aa12.1□□□□□ -0.47
MSL3-216ENST00000483645 PYGBP11216 843 aa12.09□□□□□ -0.47
MSL3-216ENST00000483645 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
MSL3-216ENST00000483645 LHX8Q68G74 356 aa12.07□□□□□ -0.48
MSL3-216ENST00000483645 MAP3K13O43283 966 aa12.06□□□□□ -0.48
MSL3-216ENST00000483645 SGIP1Q9BQI5 828 aa12.06□□□□□ -0.48
MSL3-216ENST00000483645 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
MSL3-216ENST00000483645 GALR2O43603 387 aaPredicted RBP12.04□□□□□ -0.48
MSL3-216ENST00000483645 MS4A3Q96HJ5 214 aa12.04□□□□□ -0.48
MSL3-216ENST00000483645 CHRM1P11229 460 aaPredicted RBP12.03□□□□□ -0.48
MSL3-216ENST00000483645 DCBLD2Q96PD2 775 aa12.02□□□□□ -0.49
MSL3-216ENST00000483645 ZNF467Q7Z7K2 595 aaPredicted RBP11.98□□□□□ -0.49
MSL3-216ENST00000483645 IFNL1Q8IU54 200 aa11.96□□□□□ -0.49
MSL3-216ENST00000483645 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
MSL3-216ENST00000483645 PCDHB8Q9UN66 801 aa11.92□□□□□ -0.5
MSL3-216ENST00000483645 PKD2Q13563 968 aa11.91□□□□□ -0.5
MSL3-216ENST00000483645 TIE1P35590 1138 aa11.9□□□□□ -0.5
MSL3-216ENST00000483645 TAOK2Q9UL54 1235 aa11.87□□□□□ -0.51
MSL3-216ENST00000483645 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
MSL3-216ENST00000483645 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
MSL3-216ENST00000483645 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
MSL3-216ENST00000483645 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
MSL3-216ENST00000483645 AMER1Q5JTC6 1135 aaPredicted RBP11.84□□□□□ -0.51
MSL3-216ENST00000483645 ASTLQ6HA08 431 aaPredicted RBP11.84□□□□□ -0.51
MSL3-216ENST00000483645 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
MSL3-216ENST00000483645 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
MSL3-216ENST00000483645 TTLL13PA6NNM8 815 aa11.82□□□□□ -0.52
MSL3-216ENST00000483645 POTEIP0CG38 1075 aa11.82□□□□□ -0.52
MSL3-216ENST00000483645 PSEN1P49768 467 aa11.82□□□□□ -0.52
MSL3-216ENST00000483645 VGFO15240 615 aaPredicted RBP11.8□□□□□ -0.52
MSL3-216ENST00000483645 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
MSL3-216ENST00000483645 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
MSL3-216ENST00000483645 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
MSL3-216ENST00000483645 RGL2O15211 777 aa11.77□□□□□ -0.53
MSL3-216ENST00000483645 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
MSL3-216ENST00000483645 SLC39A7Q92504 469 aa11.75□□□□□ -0.53
MSL3-216ENST00000483645 C7P10643 843 aa11.72□□□□□ -0.53
MSL3-216ENST00000483645 PELP1Q8IZL8 1130 aaKnown RBP11.72□□□□□ -0.53
MSL3-216ENST00000483645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.71□□□□□ -0.53
MSL3-216ENST00000483645 ZFP91Q96JP5 570 aaPredicted RBP11.71□□□□□ -0.53
MSL3-216ENST00000483645 MKRN3Q13064 507 aaKnown RBP11.7□□□□□ -0.54
MSL3-216ENST00000483645 IER5LQ5T953 404 aa11.7□□□□□ -0.54
MSL3-216ENST00000483645 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
MSL3-216ENST00000483645 DCAF8L2P0C7V8 631 aa11.69□□□□□ -0.54
MSL3-216ENST00000483645 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
MSL3-216ENST00000483645 SEC24BO95487 1268 aa11.68□□□□□ -0.54
MSL3-216ENST00000483645 CABP2Q9NPB3 220 aa11.68□□□□□ -0.54
MSL3-216ENST00000483645 STK25O00506 426 aa11.67□□□□□ -0.54
MSL3-216ENST00000483645 STK24Q9Y6E0 443 aa11.65□□□□□ -0.54
MSL3-216ENST00000483645 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
MSL3-216ENST00000483645 PLCG2P16885 1265 aa11.62□□□□□ -0.55
MSL3-216ENST00000483645 CHGAP10645 457 aaKnown RBP11.58□□□□□ -0.56
MSL3-216ENST00000483645 OCEL1Q9H607 264 aa11.58□□□□□ -0.56
MSL3-216ENST00000483645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.58□□□□□ -0.562e-8■■■■■ 35.5
MSL3-216ENST00000483645 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
MSL3-216ENST00000483645 IRX5P78411 483 aaPredicted RBP11.56□□□□□ -0.56
MSL3-216ENST00000483645 HS6ST3Q8IZP7 471 aa11.56□□□□□ -0.56
MSL3-216ENST00000483645 SOX12O15370 315 aa11.55□□□□□ -0.56
MSL3-216ENST00000483645 COLQQ9Y215 455 aaPredicted RBP11.54□□□□□ -0.56
MSL3-216ENST00000483645 POTEFA5A3E0 1075 aa11.49□□□□□ -0.57
MSL3-216ENST00000483645 G3V3G9 751 aa11.48□□□□□ -0.57
MSL3-216ENST00000483645 NLRP6P59044 892 aa11.48□□□□□ -0.57
MSL3-216ENST00000483645 MAMSTRQ6ZN01 415 aa11.48□□□□□ -0.57
MSL3-216ENST00000483645 PDCD7Q8N8D1 485 aaKnown RBP11.46□□□□□ -0.57
MSL3-216ENST00000483645 L3MBTL3Q96JM7 780 aaPredicted RBP11.46□□□□□ -0.57
MSL3-216ENST00000483645 POTEMA6NI47 508 aa11.45□□□□□ -0.58
MSL3-216ENST00000483645 ILDR1Q86SU0 546 aaPredicted RBP11.45□□□□□ -0.58
MSL3-216ENST00000483645 PHF8Q9UPP1 1060 aa11.45□□□□□ -0.58
MSL3-216ENST00000483645 SCUBE2Q9NQ36 999 aa11.44□□□□□ -0.58
MSL3-216ENST00000483645 POTEB2H3BUK9 544 aa11.43□□□□□ -0.58
MSL3-216ENST00000483645 RYDENQ9NUL5 291 aaKnown RBP11.42□□□□□ -0.58
MSL3-216ENST00000483645 MFRPQ9BY79 579 aa11.41□□□□□ -0.58
MSL3-216ENST00000483645 DNAJC5Q9H3Z4 198 aa11.41□□□□□ -0.58
MSL3-216ENST00000483645 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
MSL3-216ENST00000483645 POTEGQ6S5H5 508 aa11.37□□□□□ -0.59
MSL3-216ENST00000483645 C3orf67Q6ZVT6 689 aa11.37□□□□□ -0.59
MSL3-216ENST00000483645 FBXO22Q8NEZ5 403 aa11.37□□□□□ -0.59
MSL3-216ENST00000483645 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
MSL3-216ENST00000483645 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
MSL3-216ENST00000483645 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
MSL3-216ENST00000483645 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
MSL3-216ENST00000483645 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
MSL3-216ENST00000483645 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
MSL3-216ENST00000483645 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
MSL3-216ENST00000483645 NKX1-1Q15270 411 aaPredicted RBP11.32□□□□□ -0.6
MSL3-216ENST00000483645 MICALL2Q8IY33 904 aa11.29□□□□□ -0.6
MSL3-216ENST00000483645 SLAIN1Q8ND83 568 aa11.27□□□□□ -0.61
MSL3-216ENST00000483645 TMEM121BQ9BXQ6 578 aaPredicted RBP11.26□□□□□ -0.61
MSL3-216ENST00000483645 GTPBP6O43824 516 aaPredicted RBP11.23□□□□□ -0.61
MSL3-216ENST00000483645 PPP1R37O75864 691 aa11.22□□□□□ -0.61
MSL3-216ENST00000483645 SPRYD3Q8NCJ5 442 aa11.21□□□□□ -0.61
MSL3-216ENST00000483645 CFAP44Q96MT7 982 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms