RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 POTEB2H3BUK9 544 aa13.01□□□□□ -0.33
RPA3-207ENST00000483031 ATMINO43313 823 aaPredicted RBP13.01□□□□□ -0.33
RPA3-207ENST00000483031 OTUD5Q96G74 571 aa13.01□□□□□ -0.33
RPA3-207ENST00000483031 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
RPA3-207ENST00000483031 SLC39A7Q92504 469 aa12.99□□□□□ -0.33
RPA3-207ENST00000483031 KIF12Q96FN5 646 aa12.99□□□□□ -0.33
RPA3-207ENST00000483031 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
RPA3-207ENST00000483031 C7P10643 843 aa12.98□□□□□ -0.33
RPA3-207ENST00000483031 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
RPA3-207ENST00000483031 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
RPA3-207ENST00000483031 MAP3K13O43283 966 aa12.91□□□□□ -0.34
RPA3-207ENST00000483031 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
RPA3-207ENST00000483031 FKBP8Q14318 412 aa12.9□□□□□ -0.34
RPA3-207ENST00000483031 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
RPA3-207ENST00000483031 TIE1P35590 1138 aa12.86□□□□□ -0.35
RPA3-207ENST00000483031 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
RPA3-207ENST00000483031 TRPC6Q9Y210 931 aa12.85□□□□□ -0.35
RPA3-207ENST00000483031 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
RPA3-207ENST00000483031 NUBP1P53384 320 aa12.81□□□□□ -0.36
RPA3-207ENST00000483031 SGIP1Q9BQI5 828 aa12.8□□□□□ -0.36
RPA3-207ENST00000483031 FAM212AQ96EL1 285 aa12.78□□□□□ -0.36
RPA3-207ENST00000483031 PCDHB13Q9Y5F0 798 aa12.78□□□□□ -0.36
RPA3-207ENST00000483031 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
RPA3-207ENST00000483031 SCUBE2Q9NQ36 999 aa12.77□□□□□ -0.37
RPA3-207ENST00000483031 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
RPA3-207ENST00000483031 POTEFA5A3E0 1075 aa12.73□□□□□ -0.37
RPA3-207ENST00000483031 POTEMA6NI47 508 aa12.73□□□□□ -0.37
RPA3-207ENST00000483031 SEC24BO95487 1268 aa12.72□□□□□ -0.37
RPA3-207ENST00000483031 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
RPA3-207ENST00000483031 POTEGQ6S5H5 508 aa12.7□□□□□ -0.38
RPA3-207ENST00000483031 TRIM35Q9UPQ4 493 aa12.69□□□□□ -0.38
RPA3-207ENST00000483031 IER5LQ5T953 404 aa12.68□□□□□ -0.38
RPA3-207ENST00000483031 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
RPA3-207ENST00000483031 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
RPA3-207ENST00000483031 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
RPA3-207ENST00000483031 TMEM106CQ9BVX2 250 aa12.63□□□□□ -0.39
RPA3-207ENST00000483031 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
RPA3-207ENST00000483031 PYGBP11216 843 aa12.58□□□□□ -0.4
RPA3-207ENST00000483031 PCDH10Q9P2E7 1040 aa12.56□□□□□ -0.4
RPA3-207ENST00000483031 PLCG2P16885 1265 aa12.54□□□□□ -0.4
RPA3-207ENST00000483031 LCE2DQ5TA82 110 aaPredicted RBP12.54□□□□□ -0.4
RPA3-207ENST00000483031 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
RPA3-207ENST00000483031 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
RPA3-207ENST00000483031 GSE1Q14687 1217 aa12.49□□□□□ -0.41
RPA3-207ENST00000483031 PCDHB8Q9UN66 801 aa12.49□□□□□ -0.41
RPA3-207ENST00000483031 IRX5P78411 483 aaPredicted RBP12.48□□□□□ -0.41
RPA3-207ENST00000483031 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.41
RPA3-207ENST00000483031 OCEL1Q9H607 264 aa12.44□□□□□ -0.42
RPA3-207ENST00000483031 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
RPA3-207ENST00000483031 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
RPA3-207ENST00000483031 GOLGA2Q08379 1002 aa12.36□□□□□ -0.43
RPA3-207ENST00000483031 MKRN3Q13064 507 aaKnown RBP12.33□□□□□ -0.44
RPA3-207ENST00000483031 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
RPA3-207ENST00000483031 ST18O60284 1047 aa12.32□□□□□ -0.44
RPA3-207ENST00000483031 SPOCK2Q92563 424 aa12.3□□□□□ -0.44
RPA3-207ENST00000483031 PSEN1P49768 467 aa12.29□□□□□ -0.44
RPA3-207ENST00000483031 PDCD7Q8N8D1 485 aaKnown RBP12.29□□□□□ -0.44
RPA3-207ENST00000483031 SNPHO15079 494 aa12.28□□□□□ -0.44
RPA3-207ENST00000483031 CDAN1Q8IWY9 1227 aa12.28□□□□□ -0.44
RPA3-207ENST00000483031 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
RPA3-207ENST00000483031 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
RPA3-207ENST00000483031 L3MBTL3Q96JM7 780 aaPredicted RBP12.25□□□□□ -0.45
RPA3-207ENST00000483031 PDAP1Q13442 181 aaKnown RBP12.24□□□□□ -0.45
RPA3-207ENST00000483031 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
RPA3-207ENST00000483031 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.45
RPA3-207ENST00000483031 TMEM121BQ9BXQ6 578 aaPredicted RBP12.23□□□□□ -0.45
RPA3-207ENST00000483031 CABP2Q9NPB3 220 aa12.15□□□□□ -0.46
RPA3-207ENST00000483031 ILDR1Q86SU0 546 aaPredicted RBP12.13□□□□□ -0.47
RPA3-207ENST00000483031 G3V3G9 751 aa12.11□□□□□ -0.47
RPA3-207ENST00000483031 TRIM41Q8WV44 630 aa12.11□□□□□ -0.47
RPA3-207ENST00000483031 MARVELD3Q96A59 401 aa12.11□□□□□ -0.47
RPA3-207ENST00000483031 DPY19L2Q6NUT2 758 aa12.08□□□□□ -0.48
RPA3-207ENST00000483031 BOLA1Q9Y3E2 137 aa12.06□□□□□ -0.48
RPA3-207ENST00000483031 EMP3P54852 163 aa12.05□□□□□ -0.48
RPA3-207ENST00000483031 SPNS2Q8IVW8 549 aa11.98□□□□□ -0.49
RPA3-207ENST00000483031 EFCAB3Q8N7B9 438 aa11.98□□□□□ -0.49
RPA3-207ENST00000483031 MMRN1Q13201 1228 aa11.95□□□□□ -0.5
RPA3-207ENST00000483031 FAM205CA6NFA0 338 aa11.94□□□□□ -0.5
RPA3-207ENST00000483031 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
RPA3-207ENST00000483031 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
RPA3-207ENST00000483031 HOXB3P14651 431 aaPredicted RBP11.92□□□□□ -0.5
RPA3-207ENST00000483031 ZNF710Q8N1W2 664 aa11.91□□□□□ -0.5
RPA3-207ENST00000483031 DOK7Q18PE1 504 aa11.9□□□□□ -0.5
RPA3-207ENST00000483031 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
RPA3-207ENST00000483031 VGFO15240 615 aaPredicted RBP11.88□□□□□ -0.51
RPA3-207ENST00000483031 SOX12O15370 315 aa11.88□□□□□ -0.51
RPA3-207ENST00000483031 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
RPA3-207ENST00000483031 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
RPA3-207ENST00000483031 RNF25Q96BH1 459 aaPredicted RBP11.87□□□□□ -0.51
RPA3-207ENST00000483031 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
RPA3-207ENST00000483031 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
RPA3-207ENST00000483031 KRTAP3-3Q9BYR6 98 aa11.86□□□□□ -0.51
RPA3-207ENST00000483031 KRTAP3-2Q9BYR7 98 aa11.86□□□□□ -0.51
RPA3-207ENST00000483031 HOXB1P14653 301 aaPredicted RBP11.85□□□□□ -0.51
RPA3-207ENST00000483031 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
RPA3-207ENST00000483031 PHF8Q9UPP1 1060 aa11.8□□□□□ -0.52
RPA3-207ENST00000483031 ERBB3P21860 1342 aa11.8□□□□□ -0.52
RPA3-207ENST00000483031 MS4A4AQ96JQ5 239 aa11.79□□□□□ -0.52
RPA3-207ENST00000483031 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
RPA3-207ENST00000483031 TMEM92Q6UXU6 159 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms