RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 PHF12Q96QT6 1004 aa13.82□□□□□ -0.2
CTNNB1-213ENST00000482042 CCDC61Q9Y6R9 512 aa13.8□□□□□ -0.2
CTNNB1-213ENST00000482042 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
CTNNB1-213ENST00000482042 GALR2O43603 387 aaPredicted RBP13.72□□□□□ -0.21
CTNNB1-213ENST00000482042 IFNLR1Q8IU57 520 aaPredicted RBP13.72□□□□□ -0.21
CTNNB1-213ENST00000482042 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
CTNNB1-213ENST00000482042 KIF12Q96FN5 646 aa13.68□□□□□ -0.22
CTNNB1-213ENST00000482042 MS4A3Q96HJ5 214 aa13.67□□□□□ -0.22
CTNNB1-213ENST00000482042 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
CTNNB1-213ENST00000482042 SPOCK2Q92563 424 aa13.62□□□□□ -0.23
CTNNB1-213ENST00000482042 DCBLD2Q96PD2 775 aa13.62□□□□□ -0.23
CTNNB1-213ENST00000482042 MAP3K13O43283 966 aa13.6□□□□□ -0.23
CTNNB1-213ENST00000482042 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
CTNNB1-213ENST00000482042 GSE1Q14687 1217 aa13.58□□□□□ -0.24
CTNNB1-213ENST00000482042 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.24
CTNNB1-213ENST00000482042 ABCC9O60706 1549 aa13.53□□□□□ -0.24
CTNNB1-213ENST00000482042 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.25
CTNNB1-213ENST00000482042 ASTLQ6HA08 431 aaPredicted RBP13.5□□□□□ -0.25
CTNNB1-213ENST00000482042 PYGBP11216 843 aa13.49□□□□□ -0.25
CTNNB1-213ENST00000482042 TRPC6Q9Y210 931 aa13.48□□□□□ -0.25
CTNNB1-213ENST00000482042 ATMINO43313 823 aaPredicted RBP13.46□□□□□ -0.25
CTNNB1-213ENST00000482042 TIE1P35590 1138 aa13.46□□□□□ -0.25
CTNNB1-213ENST00000482042 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
CTNNB1-213ENST00000482042 CHRM1P11229 460 aaPredicted RBP13.45□□□□□ -0.26
CTNNB1-213ENST00000482042 BMP2KQ9NSY1 1161 aaPredicted RBP13.44□□□□□ -0.26
CTNNB1-213ENST00000482042 CIZ1Q9ULV3 898 aaPredicted RBP13.43□□□□□ -0.26
CTNNB1-213ENST00000482042 PELP1Q8IZL8 1130 aaKnown RBP13.42□□□□□ -0.26
CTNNB1-213ENST00000482042 ATN1P54259 1190 aaPredicted RBP13.39□□□□□ -0.27
CTNNB1-213ENST00000482042 TTLL13PA6NNM8 815 aa13.38□□□□□ -0.27
CTNNB1-213ENST00000482042 LHX8Q68G74 356 aa13.38□□□□□ -0.27
CTNNB1-213ENST00000482042 ZNF467Q7Z7K2 595 aaPredicted RBP13.36□□□□□ -0.27
CTNNB1-213ENST00000482042 TRIM41Q8WV44 630 aa13.36□□□□□ -0.27
CTNNB1-213ENST00000482042 PCDHB8Q9UN66 801 aa13.35□□□□□ -0.27
CTNNB1-213ENST00000482042 SLC39A7Q92504 469 aa13.34□□□□□ -0.27
CTNNB1-213ENST00000482042 C7P10643 843 aa13.32□□□□□ -0.28
CTNNB1-213ENST00000482042 TMEM106CQ9BVX2 250 aa13.31□□□□□ -0.28
CTNNB1-213ENST00000482042 METRNQ9UJH8 293 aa13.31□□□□□ -0.28
CTNNB1-213ENST00000482042 TRIM35Q9UPQ4 493 aa13.28□□□□□ -0.28
CTNNB1-213ENST00000482042 ZCCHC6Q5VYS8 1495 aaKnown RBP13.27□□□□□ -0.29
CTNNB1-213ENST00000482042 NACADO15069 1562 aa13.26□□□□□ -0.29
CTNNB1-213ENST00000482042 RB1CC1Q8TDY2 1594 aa13.25□□□□□ -0.29
CTNNB1-213ENST00000482042 IER5LQ5T953 404 aa13.23□□□□□ -0.29
CTNNB1-213ENST00000482042 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
CTNNB1-213ENST00000482042 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
CTNNB1-213ENST00000482042 POTEB2H3BUK9 544 aa13.2□□□□□ -0.3
CTNNB1-213ENST00000482042 PSEN1P49768 467 aa13.2□□□□□ -0.3
CTNNB1-213ENST00000482042 PDAP1Q13442 181 aaKnown RBP13.2□□□□□ -0.3
CTNNB1-213ENST00000482042 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
CTNNB1-213ENST00000482042 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
CTNNB1-213ENST00000482042 COLQQ9Y215 455 aaPredicted RBP13.14□□□□□ -0.31
CTNNB1-213ENST00000482042 RIOK3O14730 519 aaKnown RBP13.13□□□□□ -0.31
CTNNB1-213ENST00000482042 PKD2Q13563 968 aa13.13□□□□□ -0.31
CTNNB1-213ENST00000482042 SEC24BO95487 1268 aa13.11□□□□□ -0.31
CTNNB1-213ENST00000482042 IRX5P78411 483 aaPredicted RBP13.1□□□□□ -0.31
CTNNB1-213ENST00000482042 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.31
CTNNB1-213ENST00000482042 DCAF8L2P0C7V8 631 aa13.08□□□□□ -0.31
CTNNB1-213ENST00000482042 POTEJP0CG39 1038 aa13.08□□□□□ -0.31
CTNNB1-213ENST00000482042 VGFO15240 615 aaPredicted RBP13.07□□□□□ -0.32
CTNNB1-213ENST00000482042 PLCG2P16885 1265 aa13.07□□□□□ -0.32
CTNNB1-213ENST00000482042 GOLGA2Q08379 1002 aa13.07□□□□□ -0.32
CTNNB1-213ENST00000482042 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
CTNNB1-213ENST00000482042 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
CTNNB1-213ENST00000482042 OCEL1Q9H607 264 aa13.04□□□□□ -0.32
CTNNB1-213ENST00000482042 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
CTNNB1-213ENST00000482042 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
CTNNB1-213ENST00000482042 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
CTNNB1-213ENST00000482042 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
CTNNB1-213ENST00000482042 ZFP91Q96JP5 570 aaPredicted RBP13.01□□□□□ -0.33
CTNNB1-213ENST00000482042 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
CTNNB1-213ENST00000482042 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
CTNNB1-213ENST00000482042 PDCD7Q8N8D1 485 aaKnown RBP12.99□□□□□ -0.33
CTNNB1-213ENST00000482042 RGL2O15211 777 aa12.98□□□□□ -0.33
CTNNB1-213ENST00000482042 SCUBE2Q9NQ36 999 aa12.97□□□□□ -0.33
CTNNB1-213ENST00000482042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.332e-14■□□□□ 8.3
CTNNB1-213ENST00000482042 EFCAB3Q8N7B9 438 aa12.93□□□□□ -0.34
CTNNB1-213ENST00000482042 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
CTNNB1-213ENST00000482042 STK25O00506 426 aa12.86□□□□□ -0.35
CTNNB1-213ENST00000482042 SOX12O15370 315 aa12.86□□□□□ -0.35
CTNNB1-213ENST00000482042 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
CTNNB1-213ENST00000482042 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
CTNNB1-213ENST00000482042 SCRIBQ14160 1630 aa12.84□□□□□ -0.35
CTNNB1-213ENST00000482042 DPY19L2Q6NUT2 758 aa12.82□□□□□ -0.36
CTNNB1-213ENST00000482042 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
CTNNB1-213ENST00000482042 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
CTNNB1-213ENST00000482042 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.78□□□□□ -0.36
CTNNB1-213ENST00000482042 SLAIN1Q8ND83 568 aa12.77□□□□□ -0.37
CTNNB1-213ENST00000482042 C3orf67Q6ZVT6 689 aa12.76□□□□□ -0.37
CTNNB1-213ENST00000482042 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
CTNNB1-213ENST00000482042 NLRP6P59044 892 aa12.75□□□□□ -0.37
CTNNB1-213ENST00000482042 HS6ST3Q8IZP7 471 aa12.75□□□□□ -0.37
CTNNB1-213ENST00000482042 FBXO22Q8NEZ5 403 aa12.75□□□□□ -0.37
CTNNB1-213ENST00000482042 BICRAQ9NZM4 1560 aa12.75□□□□□ -0.37
CTNNB1-213ENST00000482042 SHROOM4Q9ULL8 1493 aa12.74□□□□□ -0.37
CTNNB1-213ENST00000482042 MFRPQ9BY79 579 aa12.74□□□□□ -0.37
CTNNB1-213ENST00000482042 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
CTNNB1-213ENST00000482042 G3V3G9 751 aa12.72□□□□□ -0.37
CTNNB1-213ENST00000482042 MICALL2Q8IY33 904 aa12.68□□□□□ -0.38
CTNNB1-213ENST00000482042 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
CTNNB1-213ENST00000482042 DNAJC5Q9H3Z4 198 aa12.66□□□□□ -0.38
CTNNB1-213ENST00000482042 AMER1Q5JTC6 1135 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms