RNA–Protein interactions for RNA: ENST00000481978.5

NIFK-206, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 2

Gene NIFK, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-206ENST00000481978 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
NIFK-206ENST00000481978 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
NIFK-206ENST00000481978 GABBR2O75899 941 aa13.69□□□□□ -0.22
NIFK-206ENST00000481978 PHF12Q96QT6 1004 aa13.66□□□□□ -0.22
NIFK-206ENST00000481978 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
NIFK-206ENST00000481978 GSE1Q14687 1217 aa13.62□□□□□ -0.23
NIFK-206ENST00000481978 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
NIFK-206ENST00000481978 GALR2O43603 387 aaPredicted RBP13.54□□□□□ -0.24
NIFK-206ENST00000481978 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
NIFK-206ENST00000481978 MAP3K13O43283 966 aa13.51□□□□□ -0.25
NIFK-206ENST00000481978 MS4A3Q96HJ5 214 aa13.51□□□□□ -0.25
NIFK-206ENST00000481978 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
NIFK-206ENST00000481978 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
NIFK-206ENST00000481978 PYGBP11216 843 aa13.48□□□□□ -0.25
NIFK-206ENST00000481978 TRIM41Q8WV44 630 aa13.46□□□□□ -0.25
NIFK-206ENST00000481978 PCDHB13Q9Y5F0 798 aa13.46□□□□□ -0.25
NIFK-206ENST00000481978 DCBLD2Q96PD2 775 aa13.42□□□□□ -0.26
NIFK-206ENST00000481978 IFNL1Q8IU54 200 aa13.4□□□□□ -0.26
NIFK-206ENST00000481978 POTEIP0CG38 1075 aa13.39□□□□□ -0.27
NIFK-206ENST00000481978 ZNF467Q7Z7K2 595 aaPredicted RBP13.36□□□□□ -0.27
NIFK-206ENST00000481978 TIE1P35590 1138 aa13.35□□□□□ -0.27
NIFK-206ENST00000481978 TRPC6Q9Y210 931 aa13.35□□□□□ -0.27
NIFK-206ENST00000481978 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
NIFK-206ENST00000481978 PCDHB8Q9UN66 801 aa13.32□□□□□ -0.28
NIFK-206ENST00000481978 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
NIFK-206ENST00000481978 PKD2Q13563 968 aa13.3□□□□□ -0.28
NIFK-206ENST00000481978 BMP2KQ9NSY1 1161 aaPredicted RBP13.3□□□□□ -0.28
NIFK-206ENST00000481978 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
NIFK-206ENST00000481978 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
NIFK-206ENST00000481978 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
NIFK-206ENST00000481978 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
NIFK-206ENST00000481978 TMEM106CQ9BVX2 250 aa13.23□□□□□ -0.29
NIFK-206ENST00000481978 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
NIFK-206ENST00000481978 RNF25Q96BH1 459 aaPredicted RBP13.22□□□□□ -0.29
NIFK-206ENST00000481978 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
NIFK-206ENST00000481978 PSEN1P49768 467 aa13.2□□□□□ -0.3
NIFK-206ENST00000481978 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
NIFK-206ENST00000481978 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
NIFK-206ENST00000481978 C7P10643 843 aa13.16□□□□□ -0.3
NIFK-206ENST00000481978 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
NIFK-206ENST00000481978 IER5LQ5T953 404 aa13.12□□□□□ -0.31
NIFK-206ENST00000481978 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
NIFK-206ENST00000481978 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
NIFK-206ENST00000481978 RGL2O15211 777 aa13.11□□□□□ -0.31
NIFK-206ENST00000481978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.06□□□□□ -0.32
NIFK-206ENST00000481978 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
NIFK-206ENST00000481978 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
NIFK-206ENST00000481978 GOLGA2Q08379 1002 aa13.03□□□□□ -0.32
NIFK-206ENST00000481978 LHX8Q68G74 356 aa13.02□□□□□ -0.33
NIFK-206ENST00000481978 POTEFA5A3E0 1075 aa13.01□□□□□ -0.33
NIFK-206ENST00000481978 MKRN3Q13064 507 aaKnown RBP13.01□□□□□ -0.33
NIFK-206ENST00000481978 CABP2Q9NPB3 220 aa13.01□□□□□ -0.33
NIFK-206ENST00000481978 IRX5P78411 483 aaPredicted RBP13□□□□□ -0.33
NIFK-206ENST00000481978 SEC24BO95487 1268 aa12.99□□□□□ -0.33
NIFK-206ENST00000481978 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
NIFK-206ENST00000481978 POTEB2H3BUK9 544 aa12.96□□□□□ -0.33
NIFK-206ENST00000481978 BCL11BQ9C0K0 894 aaPredicted RBP12.96□□□□□ -0.33
NIFK-206ENST00000481978 OCEL1Q9H607 264 aa12.96□□□□□ -0.33
NIFK-206ENST00000481978 STK25O00506 426 aa12.95□□□□□ -0.34
NIFK-206ENST00000481978 PLCG2P16885 1265 aa12.95□□□□□ -0.34
NIFK-206ENST00000481978 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
NIFK-206ENST00000481978 RTN4Q9NQC3 1192 aaKnown RBP12.93□□□□□ -0.34
NIFK-206ENST00000481978 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
NIFK-206ENST00000481978 EFCAB3Q8N7B9 438 aa12.92□□□□□ -0.34
NIFK-206ENST00000481978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.91□□□□□ -0.346e-7■■■■□ 20.4
NIFK-206ENST00000481978 PDCD7Q8N8D1 485 aaKnown RBP12.89□□□□□ -0.35
NIFK-206ENST00000481978 SOX12O15370 315 aa12.88□□□□□ -0.35
NIFK-206ENST00000481978 HS6ST3Q8IZP7 471 aa12.88□□□□□ -0.35
NIFK-206ENST00000481978 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
NIFK-206ENST00000481978 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
NIFK-206ENST00000481978 CHGAP10645 457 aaKnown RBP12.83□□□□□ -0.36
NIFK-206ENST00000481978 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
NIFK-206ENST00000481978 DNAJC5Q9H3Z4 198 aa12.8□□□□□ -0.36
NIFK-206ENST00000481978 NLRP6P59044 892 aa12.79□□□□□ -0.36
NIFK-206ENST00000481978 L3MBTL3Q96JM7 780 aaPredicted RBP12.79□□□□□ -0.36
NIFK-206ENST00000481978 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
NIFK-206ENST00000481978 SCUBE2Q9NQ36 999 aa12.78□□□□□ -0.36
NIFK-206ENST00000481978 FBXO22Q8NEZ5 403 aa12.77□□□□□ -0.37
NIFK-206ENST00000481978 MFRPQ9BY79 579 aa12.77□□□□□ -0.37
NIFK-206ENST00000481978 DCAF8L2P0C7V8 631 aa12.76□□□□□ -0.37
NIFK-206ENST00000481978 DPY19L2Q6NUT2 758 aa12.76□□□□□ -0.37
NIFK-206ENST00000481978 MS4A4AQ96JQ5 239 aa12.76□□□□□ -0.37
NIFK-206ENST00000481978 BOLA1Q9Y3E2 137 aa12.71□□□□□ -0.37
NIFK-206ENST00000481978 G3V3G9 751 aa12.68□□□□□ -0.38
NIFK-206ENST00000481978 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
NIFK-206ENST00000481978 NKX1-1Q15270 411 aaPredicted RBP12.67□□□□□ -0.38
NIFK-206ENST00000481978 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
NIFK-206ENST00000481978 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
NIFK-206ENST00000481978 MICALL2Q8IY33 904 aa12.63□□□□□ -0.39
NIFK-206ENST00000481978 RYDENQ9NUL5 291 aaKnown RBP12.63□□□□□ -0.39
NIFK-206ENST00000481978 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
NIFK-206ENST00000481978 PPP1R37O75864 691 aa12.56□□□□□ -0.4
NIFK-206ENST00000481978 BBXQ8WY36 941 aaPredicted RBP12.56□□□□□ -0.4
NIFK-206ENST00000481978 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
NIFK-206ENST00000481978 TMEM92Q6UXU6 159 aa12.47□□□□□ -0.41
NIFK-206ENST00000481978 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.45□□□□□ -0.42
NIFK-206ENST00000481978 SNPHO15079 494 aa12.44□□□□□ -0.42
NIFK-206ENST00000481978 KIF3CO14782 793 aa12.41□□□□□ -0.42
NIFK-206ENST00000481978 SPRYD3Q8NCJ5 442 aa12.39□□□□□ -0.43
NIFK-206ENST00000481978 C2orf72A6NCS6 295 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms