RNA–Protein interactions for RNA: ENST00000481431.1

LRP8-210, Transcript of LDL receptor related protein 8, humanhuman

TSL 3

Gene LRP8, Length 627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-210ENST00000481431 RIMBP3Q9UFD9 1639 aa10.76□□□□□ -0.69
LRP8-210ENST00000481431 SPDYE2BA6NHP3 402 aa10.75□□□□□ -0.69
LRP8-210ENST00000481431 SPDYE6P0CI01 402 aa10.75□□□□□ -0.69
LRP8-210ENST00000481431 SPDYE2Q495Y8 402 aa10.75□□□□□ -0.69
LRP8-210ENST00000481431 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
LRP8-210ENST00000481431 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
LRP8-210ENST00000481431 CADPSQ9ULU8 1353 aa10.72□□□□□ -0.69
LRP8-210ENST00000481431 SPOCK2Q92563 424 aa10.71□□□□□ -0.69
LRP8-210ENST00000481431 CEP164Q9UPV0 1460 aa10.7□□□□□ -0.7
LRP8-210ENST00000481431 PKD2Q13563 968 aa10.7□□□□□ -0.7
LRP8-210ENST00000481431 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
LRP8-210ENST00000481431 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
LRP8-210ENST00000481431 SSUH2Q9Y2M2 353 aa10.67□□□□□ -0.7
LRP8-210ENST00000481431 MIER1Q8N108 512 aa10.64□□□□□ -0.71
LRP8-210ENST00000481431 MROH2BQ7Z745 1585 aa10.64□□□□□ -0.71
LRP8-210ENST00000481431 FANCD2Q9BXW9 1451 aa10.62□□□□□ -0.71
LRP8-210ENST00000481431 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
LRP8-210ENST00000481431 ECM2O94769 699 aaPredicted RBP10.61□□□□□ -0.71
LRP8-210ENST00000481431 PLEKHG5O94827 1062 aa10.61□□□□□ -0.71
LRP8-210ENST00000481431 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
LRP8-210ENST00000481431 URB2Q14146 1524 aaKnown RBP10.56□□□□□ -0.72
LRP8-210ENST00000481431 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
LRP8-210ENST00000481431 CFTRP13569 1480 aa10.53□□□□□ -0.72
LRP8-210ENST00000481431 ARAP1Q96P48 1450 aa10.53□□□□□ -0.72
LRP8-210ENST00000481431 CACNB1Q02641 598 aaPredicted RBP10.52□□□□□ -0.73
LRP8-210ENST00000481431 CYB5RLQ6IPT4 315 aa10.52□□□□□ -0.73
LRP8-210ENST00000481431 WIZO95785 1651 aa10.5□□□□□ -0.73
LRP8-210ENST00000481431 BBXQ8WY36 941 aaPredicted RBP10.5□□□□□ -0.73
LRP8-210ENST00000481431 PRDM2Q13029 1718 aa10.5□□□□□ -0.73
LRP8-210ENST00000481431 CHD1O14646 1710 aa10.49□□□□□ -0.73
LRP8-210ENST00000481431 IFT140Q96RY7 1462 aa10.49□□□□□ -0.73
LRP8-210ENST00000481431 ZNF608Q9ULD9 1512 aaPredicted RBP10.48□□□□□ -0.73
LRP8-210ENST00000481431 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
LRP8-210ENST00000481431 CIZ1Q9ULV3 898 aaPredicted RBP10.48□□□□□ -0.73
LRP8-210ENST00000481431 RSF1Q96T23 1441 aaPredicted RBP10.47□□□□□ -0.73
LRP8-210ENST00000481431 VSIG10Q8N0Z9 540 aa10.46□□□□□ -0.73
LRP8-210ENST00000481431 RGL2O15211 777 aa10.44□□□□□ -0.74
LRP8-210ENST00000481431 PAXIP1Q6ZW49 1069 aaPredicted RBP10.42□□□□□ -0.74
LRP8-210ENST00000481431 CFAP44Q96MT7 982 aa10.41□□□□□ -0.74
LRP8-210ENST00000481431 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
LRP8-210ENST00000481431 BCANQ96GW7 911 aa10.39□□□□□ -0.75
LRP8-210ENST00000481431 TOPBP1Q92547 1522 aa10.38□□□□□ -0.75
LRP8-210ENST00000481431 TOP2AP11388 1531 aaKnown RBP10.37□□□□□ -0.75
LRP8-210ENST00000481431 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
LRP8-210ENST00000481431 TARBP1Q13395 1621 aaKnown RBP10.36□□□□□ -0.75
LRP8-210ENST00000481431 CLASP1Q7Z460 1538 aa10.35□□□□□ -0.75
LRP8-210ENST00000481431 CHGAP10645 457 aaKnown RBP10.35□□□□□ -0.75
LRP8-210ENST00000481431 ABCC8Q09428 1581 aa10.35□□□□□ -0.75
LRP8-210ENST00000481431 GSE1Q14687 1217 aa10.33□□□□□ -0.76
LRP8-210ENST00000481431 SPDYE1Q8NFV5 336 aaPredicted RBP10.33□□□□□ -0.76
LRP8-210ENST00000481431 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
LRP8-210ENST00000481431 DNMBPQ6XZF7 1577 aa10.33□□□□□ -0.76
LRP8-210ENST00000481431 AQRO60306 1485 aaKnown RBP eCLIP10.31□□□□□ -0.769e-7■■■■■ 28.3
LRP8-210ENST00000481431 SYNJ1O43426 1573 aa10.3□□□□□ -0.76
LRP8-210ENST00000481431 AKT1S1Q96B36 256 aa10.28□□□□□ -0.76
LRP8-210ENST00000481431 DCAF8Q5TAQ9 597 aa10.27□□□□□ -0.77
LRP8-210ENST00000481431 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
LRP8-210ENST00000481431 WDR97A6NE52 1622 aa10.26□□□□□ -0.77
LRP8-210ENST00000481431 TAOK2Q9UL54 1235 aa10.26□□□□□ -0.77
LRP8-210ENST00000481431 PRR29P0C7W0 189 aa10.25□□□□□ -0.77
LRP8-210ENST00000481431 KDM2AQ9Y2K7 1162 aa10.25□□□□□ -0.77
LRP8-210ENST00000481431 POLA1P09884 1462 aaPredicted RBP10.24□□□□□ -0.77
LRP8-210ENST00000481431 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
LRP8-210ENST00000481431 SNAPC4Q5SXM2 1469 aa10.23□□□□□ -0.77
LRP8-210ENST00000481431 NUBP1P53384 320 aa10.22□□□□□ -0.77
LRP8-210ENST00000481431 HS6ST3Q8IZP7 471 aa10.22□□□□□ -0.77
LRP8-210ENST00000481431 MAGI1Q96QZ7 1491 aaPredicted RBP10.22□□□□□ -0.77
LRP8-210ENST00000481431 FAM212AQ96EL1 285 aa10.21□□□□□ -0.77
LRP8-210ENST00000481431 TSHZ2Q9NRE2 1034 aa10.21□□□□□ -0.77
LRP8-210ENST00000481431 ILDR1Q86SU0 546 aaPredicted RBP10.2□□□□□ -0.78
LRP8-210ENST00000481431 CCDC88BA6NC98 1476 aa10.19□□□□□ -0.78
LRP8-210ENST00000481431 KIF13AQ9H1H9 1805 aa10.18□□□□□ -0.78
LRP8-210ENST00000481431 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
LRP8-210ENST00000481431 RAD54L2Q9Y4B4 1467 aa10.17□□□□□ -0.78
LRP8-210ENST00000481431 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
LRP8-210ENST00000481431 TDRD9Q8NDG6 1382 aaKnown RBP10.16□□□□□ -0.78
LRP8-210ENST00000481431 REM2Q8IYK8 340 aaPredicted RBP10.16□□□□□ -0.78
LRP8-210ENST00000481431 CHMP7Q8WUX9 453 aaPredicted RBP10.16□□□□□ -0.78
LRP8-210ENST00000481431 RNF25Q96BH1 459 aaPredicted RBP10.16□□□□□ -0.78
LRP8-210ENST00000481431 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
LRP8-210ENST00000481431 GRIN2BQ13224 1484 aa10.15□□□□□ -0.78
LRP8-210ENST00000481431 SOGA1O94964 1423 aa10.15□□□□□ -0.79
LRP8-210ENST00000481431 PBRM1Q86U86 1689 aa10.14□□□□□ -0.79
LRP8-210ENST00000481431 FGD5Q6ZNL6 1462 aa10.11□□□□□ -0.79
LRP8-210ENST00000481431 VGFO15240 615 aaPredicted RBP10.11□□□□□ -0.79
LRP8-210ENST00000481431 ERCC6L2Q5T890 1561 aa10.1□□□□□ -0.79
LRP8-210ENST00000481431 STK25O00506 426 aa10.1□□□□□ -0.79
LRP8-210ENST00000481431 PRKCSHP14314 528 aaPredicted RBP10.09□□□□□ -0.79
LRP8-210ENST00000481431 MNX1P50219 401 aaPredicted RBP10.09□□□□□ -0.79
LRP8-210ENST00000481431 CHRM1P11229 460 aaPredicted RBP10.08□□□□□ -0.8
LRP8-210ENST00000481431 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
LRP8-210ENST00000481431 RASEFQ8IZ41 740 aa10.06□□□□□ -0.8
LRP8-210ENST00000481431 SHROOM2Q13796 1616 aa10.06□□□□□ -0.8
LRP8-210ENST00000481431 KDM6BO15054 1643 aa10.05□□□□□ -0.8
LRP8-210ENST00000481431 ABCA5Q8WWZ7 1642 aa10.05□□□□□ -0.8
LRP8-210ENST00000481431 NBR1Q14596 966 aa10.05□□□□□ -0.8
LRP8-210ENST00000481431 TPRNQ4KMQ1 711 aa10.05□□□□□ -0.8
LRP8-210ENST00000481431 KDM4FA0A1W2PPD8 638 aa10.04□□□□□ -0.8
LRP8-210ENST00000481431 CUX1P39880 1505 aa10.03□□□□□ -0.8
LRP8-210ENST00000481431 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms