RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 CLCN6P51797 869 aa12.51□□□□□ -0.41
CHCHD3-205ENST00000481152 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
CHCHD3-205ENST00000481152 FAM212AQ96EL1 285 aa12.49□□□□□ -0.41
CHCHD3-205ENST00000481152 SPOCK2Q92563 424 aa12.44□□□□□ -0.42
CHCHD3-205ENST00000481152 GALR2O43603 387 aaPredicted RBP12.42□□□□□ -0.42
CHCHD3-205ENST00000481152 DCAF8Q5TAQ9 597 aa12.42□□□□□ -0.42
CHCHD3-205ENST00000481152 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
CHCHD3-205ENST00000481152 MS4A3Q96HJ5 214 aa12.38□□□□□ -0.43
CHCHD3-205ENST00000481152 GSE1Q14687 1217 aa12.37□□□□□ -0.43
CHCHD3-205ENST00000481152 MAP3K13O43283 966 aa12.35□□□□□ -0.43
CHCHD3-205ENST00000481152 DCBLD2Q96PD2 775 aa12.32□□□□□ -0.44
CHCHD3-205ENST00000481152 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
CHCHD3-205ENST00000481152 PYGBP11216 843 aa12.3□□□□□ -0.44
CHCHD3-205ENST00000481152 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
CHCHD3-205ENST00000481152 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
CHCHD3-205ENST00000481152 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
CHCHD3-205ENST00000481152 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
CHCHD3-205ENST00000481152 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
CHCHD3-205ENST00000481152 CHRM1P11229 460 aaPredicted RBP12.22□□□□□ -0.45
CHCHD3-205ENST00000481152 ASTLQ6HA08 431 aaPredicted RBP12.19□□□□□ -0.46
CHCHD3-205ENST00000481152 TIE1P35590 1138 aa12.18□□□□□ -0.46
CHCHD3-205ENST00000481152 ATMINO43313 823 aaPredicted RBP12.18□□□□□ -0.46
CHCHD3-205ENST00000481152 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
CHCHD3-205ENST00000481152 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
CHCHD3-205ENST00000481152 PCDHB8Q9UN66 801 aa12.17□□□□□ -0.46
CHCHD3-205ENST00000481152 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
CHCHD3-205ENST00000481152 PELP1Q8IZL8 1130 aaKnown RBP12.14□□□□□ -0.47
CHCHD3-205ENST00000481152 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
CHCHD3-205ENST00000481152 TTLL13PA6NNM8 815 aa12.12□□□□□ -0.47
CHCHD3-205ENST00000481152 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
CHCHD3-205ENST00000481152 SLC39A7Q92504 469 aa12.05□□□□□ -0.48
CHCHD3-205ENST00000481152 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
CHCHD3-205ENST00000481152 PKD2Q13563 968 aa12.04□□□□□ -0.48
CHCHD3-205ENST00000481152 METRNQ9UJH8 293 aa12.04□□□□□ -0.48
CHCHD3-205ENST00000481152 C7P10643 843 aa12.03□□□□□ -0.48
CHCHD3-205ENST00000481152 PSEN1P49768 467 aa12.03□□□□□ -0.48
CHCHD3-205ENST00000481152 PDAP1Q13442 181 aaKnown RBP12.03□□□□□ -0.48
CHCHD3-205ENST00000481152 RNF25Q96BH1 459 aaPredicted RBP12.02□□□□□ -0.49
CHCHD3-205ENST00000481152 ECM2O94769 699 aaPredicted RBP12.01□□□□□ -0.49
CHCHD3-205ENST00000481152 RIOK3O14730 519 aaKnown RBP11.99□□□□□ -0.49
CHCHD3-205ENST00000481152 LHX8Q68G74 356 aa11.99□□□□□ -0.49
CHCHD3-205ENST00000481152 IER5LQ5T953 404 aa11.97□□□□□ -0.49
CHCHD3-205ENST00000481152 POTEFA5A3E0 1075 aa11.92□□□□□ -0.5
CHCHD3-205ENST00000481152 VGFO15240 615 aaPredicted RBP11.92□□□□□ -0.5
CHCHD3-205ENST00000481152 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
CHCHD3-205ENST00000481152 SEC24BO95487 1268 aa11.91□□□□□ -0.5
CHCHD3-205ENST00000481152 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
CHCHD3-205ENST00000481152 RGL2O15211 777 aa11.9□□□□□ -0.5
CHCHD3-205ENST00000481152 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
CHCHD3-205ENST00000481152 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
CHCHD3-205ENST00000481152 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
CHCHD3-205ENST00000481152 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
CHCHD3-205ENST00000481152 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
CHCHD3-205ENST00000481152 MKRN3Q13064 507 aaKnown RBP11.87□□□□□ -0.51
CHCHD3-205ENST00000481152 TAOK2Q9UL54 1235 aa11.87□□□□□ -0.51
CHCHD3-205ENST00000481152 PLCG2P16885 1265 aa11.85□□□□□ -0.51
CHCHD3-205ENST00000481152 POTEJP0CG39 1038 aa11.82□□□□□ -0.52
CHCHD3-205ENST00000481152 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
CHCHD3-205ENST00000481152 EFCAB3Q8N7B9 438 aa11.79□□□□□ -0.52
CHCHD3-205ENST00000481152 BCL11BQ9C0K0 894 aaPredicted RBP11.79□□□□□ -0.52
CHCHD3-205ENST00000481152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.527e-7■■■□□ 17.9
CHCHD3-205ENST00000481152 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
CHCHD3-205ENST00000481152 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
CHCHD3-205ENST00000481152 STK25O00506 426 aa11.77□□□□□ -0.53
CHCHD3-205ENST00000481152 MAMSTRQ6ZN01 415 aa11.76□□□□□ -0.53
CHCHD3-205ENST00000481152 ILDR1Q86SU0 546 aaPredicted RBP11.76□□□□□ -0.53
CHCHD3-205ENST00000481152 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
CHCHD3-205ENST00000481152 SCUBE2Q9NQ36 999 aa11.72□□□□□ -0.53
CHCHD3-205ENST00000481152 SOX12O15370 315 aa11.69□□□□□ -0.54
CHCHD3-205ENST00000481152 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
CHCHD3-205ENST00000481152 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
CHCHD3-205ENST00000481152 HS6ST3Q8IZP7 471 aa11.66□□□□□ -0.54
CHCHD3-205ENST00000481152 L3MBTL3Q96JM7 780 aaPredicted RBP11.66□□□□□ -0.54
CHCHD3-205ENST00000481152 PHF8Q9UPP1 1060 aa11.66□□□□□ -0.54
CHCHD3-205ENST00000481152 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
CHCHD3-205ENST00000481152 MS4A4AQ96JQ5 239 aa11.63□□□□□ -0.55
CHCHD3-205ENST00000481152 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
CHCHD3-205ENST00000481152 NLRP6P59044 892 aa11.62□□□□□ -0.55
CHCHD3-205ENST00000481152 MFRPQ9BY79 579 aa11.61□□□□□ -0.55
CHCHD3-205ENST00000481152 DCAF8L2P0C7V8 631 aa11.6□□□□□ -0.55
CHCHD3-205ENST00000481152 FBXO22Q8NEZ5 403 aa11.6□□□□□ -0.55
CHCHD3-205ENST00000481152 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
CHCHD3-205ENST00000481152 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
CHCHD3-205ENST00000481152 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.58□□□□□ -0.56
CHCHD3-205ENST00000481152 G3V3G9 751 aa11.57□□□□□ -0.56
CHCHD3-205ENST00000481152 SLAIN1Q8ND83 568 aa11.56□□□□□ -0.56
CHCHD3-205ENST00000481152 TMEM121BQ9BXQ6 578 aaPredicted RBP11.54□□□□□ -0.56
CHCHD3-205ENST00000481152 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
CHCHD3-205ENST00000481152 MICALL2Q8IY33 904 aa11.52□□□□□ -0.57
CHCHD3-205ENST00000481152 NKX1-1Q15270 411 aaPredicted RBP11.5□□□□□ -0.57
CHCHD3-205ENST00000481152 PPP1R37O75864 691 aa11.43□□□□□ -0.58
CHCHD3-205ENST00000481152 RYDENQ9NUL5 291 aaKnown RBP11.41□□□□□ -0.58
CHCHD3-205ENST00000481152 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.59
CHCHD3-205ENST00000481152 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.59
CHCHD3-205ENST00000481152 SNPHO15079 494 aa11.38□□□□□ -0.59
CHCHD3-205ENST00000481152 LCE2DQ5TA82 110 aaPredicted RBP11.37□□□□□ -0.59
CHCHD3-205ENST00000481152 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
CHCHD3-205ENST00000481152 BBXQ8WY36 941 aaPredicted RBP11.32□□□□□ -0.6
CHCHD3-205ENST00000481152 ST18O60284 1047 aa11.3□□□□□ -0.6
CHCHD3-205ENST00000481152 KIF3CO14782 793 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms