RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
LRCH3-216ENST00000481048 MS4A3Q96HJ5 214 aa14.27□□□□□ -0.13
LRCH3-216ENST00000481048 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
LRCH3-216ENST00000481048 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
LRCH3-216ENST00000481048 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
LRCH3-216ENST00000481048 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
LRCH3-216ENST00000481048 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
LRCH3-216ENST00000481048 ASTLQ6HA08 431 aaPredicted RBP14.15□□□□□ -0.14
LRCH3-216ENST00000481048 ATMINO43313 823 aaPredicted RBP14.13□□□□□ -0.15
LRCH3-216ENST00000481048 MAP3K13O43283 966 aa14.1□□□□□ -0.15
LRCH3-216ENST00000481048 POTEB2H3BUK9 544 aa14.09□□□□□ -0.15
LRCH3-216ENST00000481048 NUBP1P53384 320 aa14.09□□□□□ -0.15
LRCH3-216ENST00000481048 FBXO3Q9UK99 471 aa14.07□□□□□ -0.16
LRCH3-216ENST00000481048 SLC39A7Q92504 469 aa14.06□□□□□ -0.16
LRCH3-216ENST00000481048 METRNQ9UJH8 293 aa14.06□□□□□ -0.16
LRCH3-216ENST00000481048 C7P10643 843 aa14.05□□□□□ -0.16
LRCH3-216ENST00000481048 TRPC6Q9Y210 931 aa14.05□□□□□ -0.16
LRCH3-216ENST00000481048 ATN1P54259 1190 aaPredicted RBP14.04□□□□□ -0.16
LRCH3-216ENST00000481048 OTUD5Q96G74 571 aa14.03□□□□□ -0.16
LRCH3-216ENST00000481048 BMP2KQ9NSY1 1161 aaPredicted RBP14.02□□□□□ -0.17
LRCH3-216ENST00000481048 FAM212AQ96EL1 285 aa14.01□□□□□ -0.17
LRCH3-216ENST00000481048 TIE1P35590 1138 aa13.98□□□□□ -0.17
LRCH3-216ENST00000481048 PCDHB13Q9Y5F0 798 aa13.97□□□□□ -0.17
LRCH3-216ENST00000481048 SGIP1Q9BQI5 828 aa13.95□□□□□ -0.18
LRCH3-216ENST00000481048 TTLL13PA6NNM8 815 aa13.92□□□□□ -0.18
LRCH3-216ENST00000481048 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
LRCH3-216ENST00000481048 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
LRCH3-216ENST00000481048 VASPP50552 380 aaPredicted RBP13.89□□□□□ -0.19
LRCH3-216ENST00000481048 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
LRCH3-216ENST00000481048 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
LRCH3-216ENST00000481048 POTEFA5A3E0 1075 aa13.84□□□□□ -0.19
LRCH3-216ENST00000481048 MAMSTRQ6ZN01 415 aa13.84□□□□□ -0.19
LRCH3-216ENST00000481048 PYGBP11216 843 aa13.83□□□□□ -0.2
LRCH3-216ENST00000481048 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
LRCH3-216ENST00000481048 SEC24BO95487 1268 aa13.82□□□□□ -0.2
LRCH3-216ENST00000481048 TMEM106CQ9BVX2 250 aa13.8□□□□□ -0.2
LRCH3-216ENST00000481048 COLQQ9Y215 455 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-216ENST00000481048 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
LRCH3-216ENST00000481048 IER5LQ5T953 404 aa13.76□□□□□ -0.21
LRCH3-216ENST00000481048 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
LRCH3-216ENST00000481048 GSE1Q14687 1217 aa13.73□□□□□ -0.21
LRCH3-216ENST00000481048 PCDHB8Q9UN66 801 aa13.73□□□□□ -0.21
LRCH3-216ENST00000481048 NACADO15069 1562 aa13.67□□□□□ -0.22
LRCH3-216ENST00000481048 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
LRCH3-216ENST00000481048 POTEMA6NI47 508 aa13.64□□□□□ -0.23
LRCH3-216ENST00000481048 PLCG2P16885 1265 aa13.64□□□□□ -0.23
LRCH3-216ENST00000481048 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
LRCH3-216ENST00000481048 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
LRCH3-216ENST00000481048 SPOCK2Q92563 424 aa13.61□□□□□ -0.23
LRCH3-216ENST00000481048 CHRM1P11229 460 aaPredicted RBP13.6□□□□□ -0.23
LRCH3-216ENST00000481048 IRX5P78411 483 aaPredicted RBP13.6□□□□□ -0.23
LRCH3-216ENST00000481048 FAM163AQ96GL9 167 aaPredicted RBP13.6□□□□□ -0.23
LRCH3-216ENST00000481048 CIZ1Q9ULV3 898 aaPredicted RBP13.57□□□□□ -0.24
LRCH3-216ENST00000481048 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
LRCH3-216ENST00000481048 PLSCR2Q9NRY7 297 aa13.55□□□□□ -0.24
LRCH3-216ENST00000481048 DCAF8L2P0C7V8 631 aa13.53□□□□□ -0.24
LRCH3-216ENST00000481048 LCE2DQ5TA82 110 aaPredicted RBP13.52□□□□□ -0.25
LRCH3-216ENST00000481048 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
LRCH3-216ENST00000481048 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
LRCH3-216ENST00000481048 PSEN1P49768 467 aa13.5□□□□□ -0.25
LRCH3-216ENST00000481048 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
LRCH3-216ENST00000481048 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
LRCH3-216ENST00000481048 PDAP1Q13442 181 aaKnown RBP13.44□□□□□ -0.26
LRCH3-216ENST00000481048 UNC13AQ9UPW8 1703 aa13.44□□□□□ -0.26
LRCH3-216ENST00000481048 PDCD7Q8N8D1 485 aaKnown RBP13.42□□□□□ -0.26
LRCH3-216ENST00000481048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.27
LRCH3-216ENST00000481048 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
LRCH3-216ENST00000481048 PCDH10Q9P2E7 1040 aa13.39□□□□□ -0.27
LRCH3-216ENST00000481048 CABP2Q9NPB3 220 aa13.35□□□□□ -0.27
LRCH3-216ENST00000481048 L3MBTL3Q96JM7 780 aaPredicted RBP13.34□□□□□ -0.27
LRCH3-216ENST00000481048 ST18O60284 1047 aa13.33□□□□□ -0.28
LRCH3-216ENST00000481048 TRIM41Q8WV44 630 aa13.33□□□□□ -0.28
LRCH3-216ENST00000481048 DCAF1Q9Y4B6 1507 aa13.33□□□□□ -0.28
LRCH3-216ENST00000481048 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
LRCH3-216ENST00000481048 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
LRCH3-216ENST00000481048 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
LRCH3-216ENST00000481048 SNPHO15079 494 aa13.27□□□□□ -0.29
LRCH3-216ENST00000481048 ILDR1Q86SU0 546 aaPredicted RBP13.27□□□□□ -0.29
LRCH3-216ENST00000481048 DPY19L2Q6NUT2 758 aa13.26□□□□□ -0.29
LRCH3-216ENST00000481048 CDAN1Q8IWY9 1227 aa13.22□□□□□ -0.29
LRCH3-216ENST00000481048 SHROOM4Q9ULL8 1493 aa13.21□□□□□ -0.3
LRCH3-216ENST00000481048 G3V3G9 751 aa13.19□□□□□ -0.3
LRCH3-216ENST00000481048 EFCAB3Q8N7B9 438 aa13.19□□□□□ -0.3
LRCH3-216ENST00000481048 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
LRCH3-216ENST00000481048 TMEM121BQ9BXQ6 578 aaPredicted RBP13.18□□□□□ -0.3
LRCH3-216ENST00000481048 BOLA1Q9Y3E2 137 aa13.18□□□□□ -0.3
LRCH3-216ENST00000481048 RNF25Q96BH1 459 aaPredicted RBP13.16□□□□□ -0.3
LRCH3-216ENST00000481048 MARVELD3Q96A59 401 aa13.13□□□□□ -0.31
LRCH3-216ENST00000481048 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
LRCH3-216ENST00000481048 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
LRCH3-216ENST00000481048 VGFO15240 615 aaPredicted RBP13.1□□□□□ -0.31
LRCH3-216ENST00000481048 SCRIBQ14160 1630 aa13.07□□□□□ -0.32
LRCH3-216ENST00000481048 SOX12O15370 315 aa13.05□□□□□ -0.32
LRCH3-216ENST00000481048 EMP3P54852 163 aa13.03□□□□□ -0.32
LRCH3-216ENST00000481048 CC2D2AQ9P2K1 1620 aa13.02□□□□□ -0.33
LRCH3-216ENST00000481048 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
LRCH3-216ENST00000481048 MICALL2Q8IY33 904 aa12.99□□□□□ -0.33
LRCH3-216ENST00000481048 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
LRCH3-216ENST00000481048 EIF4G1Q04637 1599 aaKnown RBP12.98□□□□□ -0.33
LRCH3-216ENST00000481048 HOXB3P14651 431 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms