RNA–Protein interactions for RNA: ENST00000481003.1

PSMD1-210, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 2

Gene PSMD1, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-210ENST00000481003 C7P10643 843 aa16.27■□□□□ 0.2
PSMD1-210ENST00000481003 ATMINO43313 823 aaPredicted RBP16.26■□□□□ 0.19
PSMD1-210ENST00000481003 MAMSTRQ6ZN01 415 aa16.26■□□□□ 0.19
PSMD1-210ENST00000481003 FAM163AQ96GL9 167 aaPredicted RBP16.23■□□□□ 0.19
PSMD1-210ENST00000481003 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
PSMD1-210ENST00000481003 MNX1P50219 401 aaPredicted RBP16.22■□□□□ 0.19
PSMD1-210ENST00000481003 LCE2DQ5TA82 110 aaPredicted RBP16.19■□□□□ 0.18
PSMD1-210ENST00000481003 SCUBE2Q9NQ36 999 aa16.18■□□□□ 0.18
PSMD1-210ENST00000481003 ATN1P54259 1190 aaPredicted RBP16.09■□□□□ 0.17
PSMD1-210ENST00000481003 TSPYL2Q9H2G4 693 aaPredicted RBP16.09■□□□□ 0.17
PSMD1-210ENST00000481003 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
PSMD1-210ENST00000481003 CCDC61Q9Y6R9 512 aa15.96■□□□□ 0.15
PSMD1-210ENST00000481003 POTEFA5A3E0 1075 aa15.95■□□□□ 0.14
PSMD1-210ENST00000481003 BMP2KQ9NSY1 1161 aaPredicted RBP15.94■□□□□ 0.14
PSMD1-210ENST00000481003 KIF12Q96FN5 646 aa15.92■□□□□ 0.14
PSMD1-210ENST00000481003 TRPC6Q9Y210 931 aa15.91■□□□□ 0.14
PSMD1-210ENST00000481003 CDAN1Q8IWY9 1227 aa15.9■□□□□ 0.14
PSMD1-210ENST00000481003 SEC24BO95487 1268 aa15.85■□□□□ 0.13
PSMD1-210ENST00000481003 TIE1P35590 1138 aa15.82■□□□□ 0.12
PSMD1-210ENST00000481003 MAP3K13O43283 966 aa15.81■□□□□ 0.12
PSMD1-210ENST00000481003 COLQQ9Y215 455 aaPredicted RBP15.81■□□□□ 0.12
PSMD1-210ENST00000481003 TTLL13PA6NNM8 815 aa15.75■□□□□ 0.11
PSMD1-210ENST00000481003 SLAIN1Q8ND83 568 aa15.68■□□□□ 0.1
PSMD1-210ENST00000481003 ST18O60284 1047 aa15.67■□□□□ 0.1
PSMD1-210ENST00000481003 RASEFQ8IZ41 740 aa15.67■□□□□ 0.1
PSMD1-210ENST00000481003 TRIM35Q9UPQ4 493 aa15.67■□□□□ 0.1
PSMD1-210ENST00000481003 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
PSMD1-210ENST00000481003 IER5LQ5T953 404 aa15.62■□□□□ 0.09
PSMD1-210ENST00000481003 MIER1Q8N108 512 aa15.6■□□□□ 0.09
PSMD1-210ENST00000481003 PROM2Q8N271 834 aa15.58■□□□□ 0.08
PSMD1-210ENST00000481003 PCDHB13Q9Y5F0 798 aa15.57■□□□□ 0.08
PSMD1-210ENST00000481003 MMRN1Q13201 1228 aa15.55■□□□□ 0.08
PSMD1-210ENST00000481003 PLCG2P16885 1265 aa15.5■□□□□ 0.07
PSMD1-210ENST00000481003 SPNS2Q8IVW8 549 aa15.5■□□□□ 0.07
PSMD1-210ENST00000481003 SGIP1Q9BQI5 828 aa15.5■□□□□ 0.07
PSMD1-210ENST00000481003 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
PSMD1-210ENST00000481003 TMEM106CQ9BVX2 250 aa15.45■□□□□ 0.06
PSMD1-210ENST00000481003 IFNL1Q8IU54 200 aa15.44■□□□□ 0.06
PSMD1-210ENST00000481003 TMEM121BQ9BXQ6 578 aaPredicted RBP15.41■□□□□ 0.06
PSMD1-210ENST00000481003 PLCD3Q8N3E9 789 aa15.39■□□□□ 0.05
PSMD1-210ENST00000481003 MARVELD3Q96A59 401 aa15.38■□□□□ 0.05
PSMD1-210ENST00000481003 IRX5P78411 483 aaPredicted RBP15.36■□□□□ 0.05
PSMD1-210ENST00000481003 SNPHO15079 494 aa15.34■□□□□ 0.05
PSMD1-210ENST00000481003 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.3■□□□□ 0.04
PSMD1-210ENST00000481003 NUBP1P53384 320 aa15.29■□□□□ 0.04
PSMD1-210ENST00000481003 OCEL1Q9H607 264 aa15.28■□□□□ 0.04
PSMD1-210ENST00000481003 FAM212AQ96EL1 285 aa15.27■□□□□ 0.04
PSMD1-210ENST00000481003 ZBTB47Q9UFB7 747 aaPredicted RBP15.27■□□□□ 0.04
PSMD1-210ENST00000481003 EMP3P54852 163 aa15.19■□□□□ 0.02
PSMD1-210ENST00000481003 PYGBP11216 843 aa15.11■□□□□ 0.01
PSMD1-210ENST00000481003 C3orf67Q6ZVT6 689 aa15.11■□□□□ 0.01
PSMD1-210ENST00000481003 HS3ST6Q96QI5 342 aa15.1■□□□□ 0.01
PSMD1-210ENST00000481003 FAM205CA6NFA0 338 aa15.09■□□□□ 0.01
PSMD1-210ENST00000481003 KRTAP3-3Q9BYR6 98 aa15.09■□□□□ 0.01
PSMD1-210ENST00000481003 KRTAP3-2Q9BYR7 98 aa15.09■□□□□ 0.01
PSMD1-210ENST00000481003 PCDHB8Q9UN66 801 aa15.08■□□□□ 0
PSMD1-210ENST00000481003 DCAF8Q5TAQ9 597 aa15.06■□□□□ 0
PSMD1-210ENST00000481003 POTEB3A0JP26 581 aa15.05■□□□□ -0
PSMD1-210ENST00000481003 POTEBQ6S5H4 581 aa15.05■□□□□ -0
PSMD1-210ENST00000481003 PDCD7Q8N8D1 485 aaKnown RBP15.01□□□□□ -0.01
PSMD1-210ENST00000481003 L3MBTL3Q96JM7 780 aaPredicted RBP14.99□□□□□ -0.01
PSMD1-210ENST00000481003 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
PSMD1-210ENST00000481003 MKRN3Q13064 507 aaKnown RBP14.96□□□□□ -0.01
PSMD1-210ENST00000481003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.88□□□□□ -0.03
PSMD1-210ENST00000481003 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
PSMD1-210ENST00000481003 RNF166Q96A37 237 aaPredicted RBP14.79□□□□□ -0.04
PSMD1-210ENST00000481003 ZNF710Q8N1W2 664 aa14.76□□□□□ -0.05
PSMD1-210ENST00000481003 ERBB3P21860 1342 aa14.75□□□□□ -0.05
PSMD1-210ENST00000481003 G3V3G9 751 aa14.74□□□□□ -0.05
PSMD1-210ENST00000481003 HOXB3P14651 431 aaPredicted RBP14.74□□□□□ -0.05
PSMD1-210ENST00000481003 PSEN1P49768 467 aa14.73□□□□□ -0.05
PSMD1-210ENST00000481003 DPY19L2Q6NUT2 758 aa14.73□□□□□ -0.05
PSMD1-210ENST00000481003 HOXB1P14653 301 aaPredicted RBP14.71□□□□□ -0.05
PSMD1-210ENST00000481003 GSE1Q14687 1217 aa14.7□□□□□ -0.06
PSMD1-210ENST00000481003 BOLA1Q9Y3E2 137 aa14.67□□□□□ -0.06
PSMD1-210ENST00000481003 MYT1LQ9UL68 1186 aa14.66□□□□□ -0.06
PSMD1-210ENST00000481003 FKBP8Q14318 412 aa14.65□□□□□ -0.06
PSMD1-210ENST00000481003 DOK7Q18PE1 504 aa14.65□□□□□ -0.06
PSMD1-210ENST00000481003 ILDR1Q86SU0 546 aaPredicted RBP14.63□□□□□ -0.07
PSMD1-210ENST00000481003 VARS2Q5ST30 1063 aaKnown RBP14.62□□□□□ -0.07
PSMD1-210ENST00000481003 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
PSMD1-210ENST00000481003 CABP2Q9NPB3 220 aa14.6□□□□□ -0.07
PSMD1-210ENST00000481003 CHRM1P11229 460 aaPredicted RBP14.58□□□□□ -0.08
PSMD1-210ENST00000481003 RIMBP2O15034 1052 aa14.57□□□□□ -0.08
PSMD1-210ENST00000481003 PDAP1Q13442 181 aaKnown RBP14.57□□□□□ -0.08
PSMD1-210ENST00000481003 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
PSMD1-210ENST00000481003 ZNF687Q8N1G0 1237 aa14.48□□□□□ -0.09
PSMD1-210ENST00000481003 PTGER2P43116 358 aa14.44□□□□□ -0.1
PSMD1-210ENST00000481003 VASPP50552 380 aaPredicted RBP14.4□□□□□ -0.1
PSMD1-210ENST00000481003 ANKRD13DQ6ZTN6 518 aa14.4□□□□□ -0.1
PSMD1-210ENST00000481003 ZSWIM6Q9HCJ5 1215 aa14.39□□□□□ -0.11
PSMD1-210ENST00000481003 GPR153Q6NV75 609 aa14.34□□□□□ -0.11
PSMD1-210ENST00000481003 TMEM92Q6UXU6 159 aa14.33□□□□□ -0.12
PSMD1-210ENST00000481003 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
PSMD1-210ENST00000481003 EFCAB3Q8N7B9 438 aa14.32□□□□□ -0.12
PSMD1-210ENST00000481003 MICALL2Q8IY33 904 aa14.29□□□□□ -0.12
PSMD1-210ENST00000481003 ARSIQ5FYB1 569 aa14.26□□□□□ -0.13
PSMD1-210ENST00000481003 LSM11P83369 360 aaKnown RBP eCLIP14.23□□□□□ -0.13
PSMD1-210ENST00000481003 PLA2G2EQ9NZK7 142 aa14.23□□□□□ -0.13
PSMD1-210ENST00000481003 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms