RNA–Protein interactions for RNA: ENST00000480594.1

SLC1A4-203, Transcript of solute carrier family 1 member 4, humanhuman

TSL 2

Gene SLC1A4, Length 5,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-203ENST00000480594 TSPY4P0CV99 314 aa14.36□□□□□ -0.11
SLC1A4-203ENST00000480594 TSPY10P0CW01 314 aa14.36□□□□□ -0.11
SLC1A4-203ENST00000480594 MYH16Q9H6N6 1097 aa14.36□□□□□ -0.11
SLC1A4-203ENST00000480594 TRIM44Q96DX7 344 aaPredicted RBP14.35□□□□□ -0.11
SLC1A4-203ENST00000480594 KDM2AQ9Y2K7 1162 aa14.35□□□□□ -0.11
SLC1A4-203ENST00000480594 PPP4R2Q9NY27 417 aa14.34□□□□□ -0.11
SLC1A4-203ENST00000480594 RSF1Q96T23 1441 aaPredicted RBP14.34□□□□□ -0.11
SLC1A4-203ENST00000480594 SUPT16HQ9Y5B9 1047 aaKnown RBP14.34□□□□□ -0.11
SLC1A4-203ENST00000480594 STAG3Q9UJ98 1225 aa14.33□□□□□ -0.12
SLC1A4-203ENST00000480594 TNIKQ9UKE5 1360 aa14.33□□□□□ -0.12
SLC1A4-203ENST00000480594 GOLGA6L22H0YM25 854 aa14.32□□□□□ -0.12
SLC1A4-203ENST00000480594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.12
SLC1A4-203ENST00000480594 ESF1Q9H501 851 aaKnown RBP14.31□□□□□ -0.12
SLC1A4-203ENST00000480594 ERICH6BQ5W0A0 696 aa14.3□□□□□ -0.12
SLC1A4-203ENST00000480594 NCLP19338 710 aaKnown RBP14.28□□□□□ -0.12
SLC1A4-203ENST00000480594 NOP58Q9Y2X3 529 aaKnown RBP14.28□□□□□ -0.12
SLC1A4-203ENST00000480594 RRP7BPQ9NSQ0 103 aa14.27□□□□□ -0.12
SLC1A4-203ENST00000480594 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
SLC1A4-203ENST00000480594 PLPPR3Q6T4P5 718 aa14.25□□□□□ -0.13
SLC1A4-203ENST00000480594 CDCA8Q53HL2 280 aa14.22□□□□□ -0.13
SLC1A4-203ENST00000480594 TNNT2P45379 298 aaPredicted RBP14.21□□□□□ -0.13
SLC1A4-203ENST00000480594 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.14
SLC1A4-203ENST00000480594 NPM1P06748 294 aaKnown RBP eCLIP14.19□□□□□ -0.14
SLC1A4-203ENST00000480594 CFAP53Q96M91 514 aa14.19□□□□□ -0.14
SLC1A4-203ENST00000480594 TIMELESSQ9UNS1 1208 aa14.18□□□□□ -0.14
SLC1A4-203ENST00000480594 CCER2I3L3R5 266 aa14.18□□□□□ -0.14
SLC1A4-203ENST00000480594 KNSTRNQ9Y448 316 aa14.18□□□□□ -0.14
SLC1A4-203ENST00000480594 LAS1LQ9Y4W2 734 aaKnown RBP14.17□□□□□ -0.14
SLC1A4-203ENST00000480594 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
SLC1A4-203ENST00000480594 PTMAP06454 111 aaKnown RBP14.16□□□□□ -0.14
SLC1A4-203ENST00000480594 CARD11Q9BXL7 1154 aa14.15□□□□□ -0.14
SLC1A4-203ENST00000480594 KIF27Q86VH2 1401 aa14.14□□□□□ -0.15
SLC1A4-203ENST00000480594 FTSJ3Q8IY81 847 aaKnown RBP14.14□□□□□ -0.15
SLC1A4-203ENST00000480594 NAP1L5Q96NT1 182 aaPredicted RBP14.13□□□□□ -0.15
SLC1A4-203ENST00000480594 SIN3AQ96ST3 1273 aa14.12□□□□□ -0.15
SLC1A4-203ENST00000480594 RBM19Q9Y4C8 960 aaKnown RBP14.11□□□□□ -0.15
SLC1A4-203ENST00000480594 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
SLC1A4-203ENST00000480594 B4GALNT3Q6L9W6 998 aa14.11□□□□□ -0.15
SLC1A4-203ENST00000480594 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
SLC1A4-203ENST00000480594 DNTTIP2Q5QJE6 756 aaKnown RBP14.1□□□□□ -0.15
SLC1A4-203ENST00000480594 DEKP35659 375 aaKnown RBP14.1□□□□□ -0.15
SLC1A4-203ENST00000480594 PLEKHD1A6NEE1 506 aa14.09□□□□□ -0.15
SLC1A4-203ENST00000480594 RTN4Q9NQC3 1192 aaKnown RBP14.09□□□□□ -0.15
SLC1A4-203ENST00000480594 MS4A1P11836 297 aa14.09□□□□□ -0.15
SLC1A4-203ENST00000480594 CHMP4BQ9H444 224 aaKnown RBP14.09□□□□□ -0.15
SLC1A4-203ENST00000480594 RGS3P49796 1198 aa14.09□□□□□ -0.15
SLC1A4-203ENST00000480594 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
SLC1A4-203ENST00000480594 RGL3Q3MIN7 710 aa14.09□□□□□ -0.15
SLC1A4-203ENST00000480594 L1TD1Q5T7N2 865 aaKnown RBP14.07□□□□□ -0.16
SLC1A4-203ENST00000480594 ZRSR1Q15695 479 aaKnown RBP14.07□□□□□ -0.16
SLC1A4-203ENST00000480594 CDK11BP21127 795 aaKnown RBP14.06□□□□□ -0.16
SLC1A4-203ENST00000480594 CFDP1Q9UEE9 299 aaPredicted RBP14.06□□□□□ -0.16
SLC1A4-203ENST00000480594 SENP3-EIF4A1A0A087X0R7 540 aa14.05□□□□□ -0.16
SLC1A4-203ENST00000480594 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
SLC1A4-203ENST00000480594 MAPK8IP3Q9UPT6 1336 aa14.04□□□□□ -0.16
SLC1A4-203ENST00000480594 A0A0G2JS52 829 aa14.04□□□□□ -0.16
SLC1A4-203ENST00000480594 NUDCQ9Y266 331 aa14.04□□□□□ -0.16
SLC1A4-203ENST00000480594 HSP90AB1P08238 724 aaKnown RBP14.03□□□□□ -0.16
SLC1A4-203ENST00000480594 FRAT1Q92837 279 aaPredicted RBP14.01□□□□□ -0.17
SLC1A4-203ENST00000480594 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
SLC1A4-203ENST00000480594 SETD5Q9C0A6 1442 aa14□□□□□ -0.17
SLC1A4-203ENST00000480594 HSCBQ8IWL3 235 aa14□□□□□ -0.17
SLC1A4-203ENST00000480594 NEUROD2Q15784 382 aa13.99□□□□□ -0.17
SLC1A4-203ENST00000480594 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
SLC1A4-203ENST00000480594 CC2D1BQ5T0F9 858 aaKnown RBP13.98□□□□□ -0.17
SLC1A4-203ENST00000480594 PPP1R15AO75807 674 aaPredicted RBP13.97□□□□□ -0.17
SLC1A4-203ENST00000480594 TMF1P82094 1093 aa13.97□□□□□ -0.17
SLC1A4-203ENST00000480594 NACADO15069 1562 aa13.97□□□□□ -0.17
SLC1A4-203ENST00000480594 PNNQ9H307 717 aaKnown RBP13.97□□□□□ -0.17
SLC1A4-203ENST00000480594 GOLGA6L6A8MZA4 724 aa13.97□□□□□ -0.17
SLC1A4-203ENST00000480594 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.18
SLC1A4-203ENST00000480594 CFAP44Q96MT7 982 aa13.96□□□□□ -0.18
SLC1A4-203ENST00000480594 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
SLC1A4-203ENST00000480594 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
SLC1A4-203ENST00000480594 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
SLC1A4-203ENST00000480594 MSNP26038 577 aaKnown RBP13.94□□□□□ -0.18
SLC1A4-203ENST00000480594 KCNH8Q96L42 1107 aa13.94□□□□□ -0.18
SLC1A4-203ENST00000480594 PTMSP20962 102 aa13.93□□□□□ -0.18
SLC1A4-203ENST00000480594 CHAF1AQ13111 956 aaPredicted RBP13.93□□□□□ -0.18
SLC1A4-203ENST00000480594 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
SLC1A4-203ENST00000480594 NRDCO43847 1150 aa13.92□□□□□ -0.18
SLC1A4-203ENST00000480594 SOGA1O94964 1423 aa13.91□□□□□ -0.18
SLC1A4-203ENST00000480594 ARHGAP35Q9NRY4 1499 aa13.9□□□□□ -0.18
SLC1A4-203ENST00000480594 KTN1Q86UP2 1357 aaKnown RBP13.9□□□□□ -0.18
SLC1A4-203ENST00000480594 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
SLC1A4-203ENST00000480594 C14orf37Q86TY3 774 aa13.89□□□□□ -0.19
SLC1A4-203ENST00000480594 DCAF11Q8TEB1 546 aa13.89□□□□□ -0.19
SLC1A4-203ENST00000480594 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
SLC1A4-203ENST00000480594 RCAN3Q9UKA8 241 aa13.88□□□□□ -0.19
SLC1A4-203ENST00000480594 ZBTB7CA1YPR0 619 aa13.88□□□□□ -0.19
SLC1A4-203ENST00000480594 IPO9Q96P70 1041 aaKnown RBP13.88□□□□□ -0.19
SLC1A4-203ENST00000480594 MCCP23508 829 aa13.87□□□□□ -0.19
SLC1A4-203ENST00000480594 RALBP1Q15311 655 aa13.87□□□□□ -0.19
SLC1A4-203ENST00000480594 GBP4Q96PP9 640 aa13.87□□□□□ -0.19
SLC1A4-203ENST00000480594 U2SURPO15042 1029 aaKnown RBP13.86□□□□□ -0.19
SLC1A4-203ENST00000480594 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
SLC1A4-203ENST00000480594 POGKQ9P215 609 aa13.85□□□□□ -0.19
SLC1A4-203ENST00000480594 GOLGA6L4A6NEF3 574 aa13.85□□□□□ -0.19
SLC1A4-203ENST00000480594 RAB3GAP2Q9H2M9 1393 aa13.85□□□□□ -0.19
SLC1A4-203ENST00000480594 HAP1P54257 671 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms