RNA–Protein interactions for RNA: ENST00000479614.1

NF1-210, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,114 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-210ENST00000479614 SHROOM4Q9ULL8 1493 aa11.2□□□□□ -0.62
NF1-210ENST00000479614 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
NF1-210ENST00000479614 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
NF1-210ENST00000479614 BICRAQ9NZM4 1560 aa11.19□□□□□ -0.62
NF1-210ENST00000479614 OTUD5Q96G74 571 aa11.17□□□□□ -0.62
NF1-210ENST00000479614 POTEB2H3BUK9 544 aa11.16□□□□□ -0.62
NF1-210ENST00000479614 PLSCR2Q9NRY7 297 aa11.13□□□□□ -0.63
NF1-210ENST00000479614 PELP1Q8IZL8 1130 aaKnown RBP11.12□□□□□ -0.63
NF1-210ENST00000479614 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
NF1-210ENST00000479614 SCRIBQ14160 1630 aa11.08□□□□□ -0.64
NF1-210ENST00000479614 ASTLQ6HA08 431 aaPredicted RBP11.06□□□□□ -0.64
NF1-210ENST00000479614 METRNQ9UJH8 293 aa11.04□□□□□ -0.64
NF1-210ENST00000479614 PROM2Q8N271 834 aa11.03□□□□□ -0.64
NF1-210ENST00000479614 ATMINO43313 823 aaPredicted RBP11.02□□□□□ -0.65
NF1-210ENST00000479614 SLC39A7Q92504 469 aa11.01□□□□□ -0.65
NF1-210ENST00000479614 TSPYL2Q9H2G4 693 aaPredicted RBP11□□□□□ -0.65
NF1-210ENST00000479614 POTEMA6NI47 508 aa10.99□□□□□ -0.65
NF1-210ENST00000479614 C7P10643 843 aa10.99□□□□□ -0.65
NF1-210ENST00000479614 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
NF1-210ENST00000479614 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
NF1-210ENST00000479614 POTEJP0CG39 1038 aa10.95□□□□□ -0.66
NF1-210ENST00000479614 POTEGQ6S5H5 508 aa10.95□□□□□ -0.66
NF1-210ENST00000479614 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
NF1-210ENST00000479614 ATN1P54259 1190 aaPredicted RBP10.93□□□□□ -0.66
NF1-210ENST00000479614 KIF12Q96FN5 646 aa10.91□□□□□ -0.66
NF1-210ENST00000479614 CECR2Q9BXF3 1484 aa10.9□□□□□ -0.66
NF1-210ENST00000479614 MAMSTRQ6ZN01 415 aa10.9□□□□□ -0.66
NF1-210ENST00000479614 BMP2KQ9NSY1 1161 aaPredicted RBP10.86□□□□□ -0.67
NF1-210ENST00000479614 TRPC6Q9Y210 931 aa10.86□□□□□ -0.67
NF1-210ENST00000479614 MAP3K13O43283 966 aa10.84□□□□□ -0.67
NF1-210ENST00000479614 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
NF1-210ENST00000479614 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
NF1-210ENST00000479614 SCUBE2Q9NQ36 999 aa10.84□□□□□ -0.67
NF1-210ENST00000479614 POTEFA5A3E0 1075 aa10.83□□□□□ -0.68
NF1-210ENST00000479614 MIER1Q8N108 512 aa10.83□□□□□ -0.68
NF1-210ENST00000479614 TIE1P35590 1138 aa10.82□□□□□ -0.68
NF1-210ENST00000479614 LCE2DQ5TA82 110 aaPredicted RBP10.81□□□□□ -0.68
NF1-210ENST00000479614 PCDH10Q9P2E7 1040 aa10.8□□□□□ -0.68
NF1-210ENST00000479614 FAM163AQ96GL9 167 aaPredicted RBP10.76□□□□□ -0.69
NF1-210ENST00000479614 TTLL13PA6NNM8 815 aa10.75□□□□□ -0.69
NF1-210ENST00000479614 COLQQ9Y215 455 aaPredicted RBP10.73□□□□□ -0.69
NF1-210ENST00000479614 PLCD3Q8N3E9 789 aa10.72□□□□□ -0.69
NF1-210ENST00000479614 SEC24BO95487 1268 aa10.71□□□□□ -0.69
NF1-210ENST00000479614 PCDHB13Q9Y5F0 798 aa10.7□□□□□ -0.7
NF1-210ENST00000479614 SGIP1Q9BQI5 828 aa10.69□□□□□ -0.7
NF1-210ENST00000479614 TRIM35Q9UPQ4 493 aa10.68□□□□□ -0.7
NF1-210ENST00000479614 IER5LQ5T953 404 aa10.67□□□□□ -0.7
NF1-210ENST00000479614 NUBP1P53384 320 aa10.66□□□□□ -0.7
NF1-210ENST00000479614 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
NF1-210ENST00000479614 NCAPD3P42695 1498 aa10.65□□□□□ -0.7
NF1-210ENST00000479614 SMARCA2P51531 1590 aa10.65□□□□□ -0.71
NF1-210ENST00000479614 IFNL1Q8IU54 200 aa10.63□□□□□ -0.71
NF1-210ENST00000479614 BAZ1AQ9NRL2 1556 aaPredicted RBP10.63□□□□□ -0.71
NF1-210ENST00000479614 SMARCA4P51532 1647 aa10.62□□□□□ -0.71
NF1-210ENST00000479614 HMGXB3Q12766 1538 aa10.6□□□□□ -0.71
NF1-210ENST00000479614 FAM212AQ96EL1 285 aa10.6□□□□□ -0.71
NF1-210ENST00000479614 ATAD2BQ9ULI0 1458 aa10.58□□□□□ -0.72
NF1-210ENST00000479614 TMEM106CQ9BVX2 250 aa10.58□□□□□ -0.72
NF1-210ENST00000479614 SLAIN1Q8ND83 568 aa10.55□□□□□ -0.72
NF1-210ENST00000479614 PEG3Q9GZU2 1588 aa10.55□□□□□ -0.72
NF1-210ENST00000479614 PLCG2P16885 1265 aa10.54□□□□□ -0.72
NF1-210ENST00000479614 CDAN1Q8IWY9 1227 aa10.54□□□□□ -0.72
NF1-210ENST00000479614 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.73
NF1-210ENST00000479614 ST18O60284 1047 aa10.51□□□□□ -0.73
NF1-210ENST00000479614 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
NF1-210ENST00000479614 FKBP8Q14318 412 aa10.49□□□□□ -0.73
NF1-210ENST00000479614 ERCC6Q03468 1493 aa10.49□□□□□ -0.73
NF1-210ENST00000479614 CUX2O14529 1486 aa10.47□□□□□ -0.73
NF1-210ENST00000479614 PYGBP11216 843 aa10.46□□□□□ -0.73
NF1-210ENST00000479614 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
NF1-210ENST00000479614 MROH2BQ7Z745 1585 aa10.44□□□□□ -0.74
NF1-210ENST00000479614 LAMC3Q9Y6N6 1575 aa10.44□□□□□ -0.74
NF1-210ENST00000479614 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
NF1-210ENST00000479614 PCDHB8Q9UN66 801 aa10.42□□□□□ -0.74
NF1-210ENST00000479614 TMEM121BQ9BXQ6 578 aaPredicted RBP10.38□□□□□ -0.75
NF1-210ENST00000479614 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.38□□□□□ -0.75
NF1-210ENST00000479614 PDS5BQ9NTI5 1447 aa10.37□□□□□ -0.75
NF1-210ENST00000479614 SNPHO15079 494 aa10.36□□□□□ -0.75
NF1-210ENST00000479614 WIZO95785 1651 aa10.36□□□□□ -0.75
NF1-210ENST00000479614 FBXO3Q9UK99 471 aa10.35□□□□□ -0.75
NF1-210ENST00000479614 NESP48681 1621 aa10.35□□□□□ -0.75
NF1-210ENST00000479614 PDCD7Q8N8D1 485 aaKnown RBP10.33□□□□□ -0.76
NF1-210ENST00000479614 DNAJC5Q9H3Z4 198 aa10.33□□□□□ -0.76
NF1-210ENST00000479614 CADPSQ9ULU8 1353 aa10.32□□□□□ -0.76
NF1-210ENST00000479614 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
NF1-210ENST00000479614 ZNF467Q7Z7K2 595 aaPredicted RBP10.31□□□□□ -0.76
NF1-210ENST00000479614 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
NF1-210ENST00000479614 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
NF1-210ENST00000479614 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
NF1-210ENST00000479614 GSE1Q14687 1217 aa10.29□□□□□ -0.76
NF1-210ENST00000479614 SPNS2Q8IVW8 549 aa10.29□□□□□ -0.76
NF1-210ENST00000479614 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
NF1-210ENST00000479614 C3orf67Q6ZVT6 689 aa10.28□□□□□ -0.76
NF1-210ENST00000479614 RSF1Q96T23 1441 aaPredicted RBP10.27□□□□□ -0.77
NF1-210ENST00000479614 MKRN3Q13064 507 aaKnown RBP10.27□□□□□ -0.77
NF1-210ENST00000479614 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
NF1-210ENST00000479614 TOP2AP11388 1531 aaKnown RBP10.26□□□□□ -0.77
NF1-210ENST00000479614 PRDM2Q13029 1718 aa10.25□□□□□ -0.77
NF1-210ENST00000479614 VASPP50552 380 aaPredicted RBP10.25□□□□□ -0.77
NF1-210ENST00000479614 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms