RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
GAPVD1-217ENST00000479511 NKX1-1Q15270 411 aaPredicted RBP15.11■□□□□ 0.01
GAPVD1-217ENST00000479511 POTEHQ6S545 545 aa15.07■□□□□ 0
GAPVD1-217ENST00000479511 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
GAPVD1-217ENST00000479511 GTPBP6O43824 516 aaPredicted RBP15.03■□□□□ -0
GAPVD1-217ENST00000479511 GSE1Q14687 1217 aa15□□□□□ -0.01
GAPVD1-217ENST00000479511 NUBP1P53384 320 aa14.99□□□□□ -0.01
GAPVD1-217ENST00000479511 TULP1O00294 542 aaPredicted RBP14.98□□□□□ -0.01
GAPVD1-217ENST00000479511 RIOK3O14730 519 aaKnown RBP14.96□□□□□ -0.01
GAPVD1-217ENST00000479511 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
GAPVD1-217ENST00000479511 GTF3C3Q9Y5Q9 886 aa14.92□□□□□ -0.02
GAPVD1-217ENST00000479511 DCAF8Q5TAQ9 597 aa14.9□□□□□ -0.02
GAPVD1-217ENST00000479511 STK25O00506 426 aa14.87□□□□□ -0.03
GAPVD1-217ENST00000479511 CHRDL2Q6WN34 429 aa14.86□□□□□ -0.03
GAPVD1-217ENST00000479511 VGFO15240 615 aaPredicted RBP14.82□□□□□ -0.04
GAPVD1-217ENST00000479511 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
GAPVD1-217ENST00000479511 CHRM1P11229 460 aaPredicted RBP14.74□□□□□ -0.05
GAPVD1-217ENST00000479511 FAM212AQ96EL1 285 aa14.74□□□□□ -0.05
GAPVD1-217ENST00000479511 BCL11BQ9C0K0 894 aaPredicted RBP14.74□□□□□ -0.05
GAPVD1-217ENST00000479511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.73□□□□□ -0.05
GAPVD1-217ENST00000479511 ZFP91Q96JP5 570 aaPredicted RBP14.73□□□□□ -0.05
GAPVD1-217ENST00000479511 SGIP1Q9BQI5 828 aa14.73□□□□□ -0.05
GAPVD1-217ENST00000479511 STK24Q9Y6E0 443 aa14.73□□□□□ -0.05
GAPVD1-217ENST00000479511 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
GAPVD1-217ENST00000479511 TMEM132AQ24JP5 1023 aa14.72□□□□□ -0.05
GAPVD1-217ENST00000479511 CREBZFQ9NS37 354 aa14.71□□□□□ -0.05
GAPVD1-217ENST00000479511 RASEFQ8IZ41 740 aa14.68□□□□□ -0.06
GAPVD1-217ENST00000479511 PITPNM1O00562 1244 aa14.63□□□□□ -0.07
GAPVD1-217ENST00000479511 RYDENQ9NUL5 291 aaKnown RBP14.63□□□□□ -0.07
GAPVD1-217ENST00000479511 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
GAPVD1-217ENST00000479511 P3H3Q8IVL6 736 aa14.61□□□□□ -0.07
GAPVD1-217ENST00000479511 PYGBP11216 843 aa14.6□□□□□ -0.07
GAPVD1-217ENST00000479511 ERICH6Q7L0X2 663 aa14.6□□□□□ -0.07
GAPVD1-217ENST00000479511 CADPS2Q86UW7 1296 aa14.59□□□□□ -0.07
GAPVD1-217ENST00000479511 KCNV2Q8TDN2 545 aa14.58□□□□□ -0.08
GAPVD1-217ENST00000479511 ARXQ96QS3 562 aa14.57□□□□□ -0.08
GAPVD1-217ENST00000479511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.56□□□□□ -0.08
GAPVD1-217ENST00000479511 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
GAPVD1-217ENST00000479511 LMOD2Q6P5Q4 547 aa14.55□□□□□ -0.08
GAPVD1-217ENST00000479511 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
GAPVD1-217ENST00000479511 PIP4P2Q8N4L2 257 aa14.53□□□□□ -0.08
GAPVD1-217ENST00000479511 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
GAPVD1-217ENST00000479511 WDR70Q9NW82 654 aa14.47□□□□□ -0.09
GAPVD1-217ENST00000479511 FXR2P51116 673 aaKnown RBP eCLIP14.45□□□□□ -0.1
GAPVD1-217ENST00000479511 BRPF1P55201 1214 aaPredicted RBP14.43□□□□□ -0.1
GAPVD1-217ENST00000479511 DAXXQ9UER7 740 aaPredicted RBP14.34□□□□□ -0.11
GAPVD1-217ENST00000479511 ZC3H15Q8WU90 426 aaKnown RBP14.33□□□□□ -0.12
GAPVD1-217ENST00000479511 ZNF467Q7Z7K2 595 aaPredicted RBP14.32□□□□□ -0.12
GAPVD1-217ENST00000479511 MFRPQ9BY79 579 aa14.32□□□□□ -0.12
GAPVD1-217ENST00000479511 PDAP1Q13442 181 aaKnown RBP14.31□□□□□ -0.12
GAPVD1-217ENST00000479511 PCDHB8Q9UN66 801 aa14.3□□□□□ -0.12
GAPVD1-217ENST00000479511 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
GAPVD1-217ENST00000479511 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
GAPVD1-217ENST00000479511 HOMEZQ8IX15 550 aa14.28□□□□□ -0.12
GAPVD1-217ENST00000479511 ARHGEF1Q92888 912 aaKnown RBP14.28□□□□□ -0.12
GAPVD1-217ENST00000479511 HAX1O00165 279 aa14.27□□□□□ -0.13
GAPVD1-217ENST00000479511 TSPYL2Q9H2G4 693 aaPredicted RBP14.27□□□□□ -0.13
GAPVD1-217ENST00000479511 PPP1R37O75864 691 aa14.26□□□□□ -0.13
GAPVD1-217ENST00000479511 NEUROD2Q15784 382 aa14.25□□□□□ -0.13
GAPVD1-217ENST00000479511 SLC24A3Q9HC58 644 aa14.24□□□□□ -0.13
GAPVD1-217ENST00000479511 SEMA3EO15041 775 aa14.23□□□□□ -0.13
GAPVD1-217ENST00000479511 TESPA1A2RU30 521 aaPredicted RBP14.22□□□□□ -0.13
GAPVD1-217ENST00000479511 PSEN1P49768 467 aa14.21□□□□□ -0.13
GAPVD1-217ENST00000479511 E2F4Q16254 413 aa14.21□□□□□ -0.13
GAPVD1-217ENST00000479511 SP7Q8TDD2 431 aaPredicted RBP14.2□□□□□ -0.14
GAPVD1-217ENST00000479511 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
GAPVD1-217ENST00000479511 FBXO22Q8NEZ5 403 aa14.16□□□□□ -0.14
GAPVD1-217ENST00000479511 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
GAPVD1-217ENST00000479511 ZNF579Q8NAF0 562 aaKnown RBP14.13□□□□□ -0.15
GAPVD1-217ENST00000479511 EFCAB3Q8N7B9 438 aa14.11□□□□□ -0.15
GAPVD1-217ENST00000479511 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
GAPVD1-217ENST00000479511 ZMYND10O75800 440 aa14.1□□□□□ -0.15
GAPVD1-217ENST00000479511 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
GAPVD1-217ENST00000479511 NLRP6P59044 892 aa14.08□□□□□ -0.16
GAPVD1-217ENST00000479511 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
GAPVD1-217ENST00000479511 FARP1Q9Y4F1 1045 aaPredicted RBP14.07□□□□□ -0.16
GAPVD1-217ENST00000479511 EVX2Q03828 476 aa14.04□□□□□ -0.16
GAPVD1-217ENST00000479511 IFNL1Q8IU54 200 aa14.03□□□□□ -0.16
GAPVD1-217ENST00000479511 CABP2Q9NPB3 220 aa14.03□□□□□ -0.16
GAPVD1-217ENST00000479511 SOX12O15370 315 aa14.02□□□□□ -0.17
GAPVD1-217ENST00000479511 LARP6Q9BRS8 491 aaKnown RBP14.01□□□□□ -0.17
GAPVD1-217ENST00000479511 BARGINQ6ZT62 677 aa14□□□□□ -0.17
GAPVD1-217ENST00000479511 C19orf67A6NJJ6 358 aa13.99□□□□□ -0.17
GAPVD1-217ENST00000479511 MFSD10Q14728 455 aa13.98□□□□□ -0.17
GAPVD1-217ENST00000479511 SMYD5Q6GMV2 418 aa13.97□□□□□ -0.17
GAPVD1-217ENST00000479511 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.17
GAPVD1-217ENST00000479511 MAP3K13O43283 966 aa13.94□□□□□ -0.18
GAPVD1-217ENST00000479511 PDE4AP27815 886 aa13.94□□□□□ -0.18
GAPVD1-217ENST00000479511 MS4A4AQ96JQ5 239 aa13.94□□□□□ -0.18
GAPVD1-217ENST00000479511 CRISPLD2Q9H0B8 497 aa13.94□□□□□ -0.18
GAPVD1-217ENST00000479511 GPBP1L1Q9HC44 474 aaPredicted RBP13.93□□□□□ -0.18
GAPVD1-217ENST00000479511 KIF12Q96FN5 646 aa13.9□□□□□ -0.18
GAPVD1-217ENST00000479511 CAMK2BQ13554 666 aa13.89□□□□□ -0.19
GAPVD1-217ENST00000479511 RBM26Q5T8P6 1007 aaKnown RBP13.89□□□□□ -0.19
GAPVD1-217ENST00000479511 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
GAPVD1-217ENST00000479511 AK7Q96M32 723 aa13.89□□□□□ -0.19
GAPVD1-217ENST00000479511 MLLT3P42568 568 aaPredicted RBP13.87□□□□□ -0.19
GAPVD1-217ENST00000479511 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
GAPVD1-217ENST00000479511 IL27Q8NEV9 243 aa13.84□□□□□ -0.19
GAPVD1-217ENST00000479511 GPIHBP1Q8IV16 184 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms